RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 KRT23Q9C075 422 aa16.98■□□□□ 0.31
HDAC6-213ENST00000462730 ZC3H12CQ9C0D7 883 aaKnown RBP16.98■□□□□ 0.31
HDAC6-213ENST00000462730 HPS5Q9UPZ3 1129 aa16.98■□□□□ 0.31
HDAC6-213ENST00000462730 TCHHQ07283 1943 aa16.98■□□□□ 0.31
HDAC6-213ENST00000462730 FIBPO43427 364 aa16.98■□□□□ 0.31
HDAC6-213ENST00000462730 PPARAQ07869 468 aa16.98■□□□□ 0.31
HDAC6-213ENST00000462730 GLIPR1L2Q4G1C9 344 aa16.98■□□□□ 0.31
HDAC6-213ENST00000462730 TMEM87BQ96K49 555 aa16.98■□□□□ 0.31
HDAC6-213ENST00000462730 COA1Q9GZY4 146 aa16.98■□□□□ 0.31
HDAC6-213ENST00000462730 RBM27Q9P2N5 1060 aaKnown RBP16.98■□□□□ 0.31
HDAC6-213ENST00000462730 ZNF219Q9P2Y4 722 aaPredicted RBP16.98■□□□□ 0.31
HDAC6-213ENST00000462730 KIF3AQ9Y496 699 aa16.98■□□□□ 0.31
HDAC6-213ENST00000462730 BAZ2AQ9UIF9 1905 aaKnown RBP16.98■□□□□ 0.31
HDAC6-213ENST00000462730 H3BQV1 296 aa16.97■□□□□ 0.31
HDAC6-213ENST00000462730 IGSF3O75054 1194 aa16.97■□□□□ 0.31
HDAC6-213ENST00000462730 KDM4AO75164 1064 aa16.97■□□□□ 0.31
HDAC6-213ENST00000462730 GADD45BO75293 160 aaPredicted RBP16.97■□□□□ 0.31
HDAC6-213ENST00000462730 FOSBP53539 338 aa16.97■□□□□ 0.31
HDAC6-213ENST00000462730 RRP12Q5JTH9 1297 aaKnown RBP16.97■□□□□ 0.31
HDAC6-213ENST00000462730 IFFO2Q5TF58 517 aa16.97■□□□□ 0.31
HDAC6-213ENST00000462730 STK11IPQ8N1F8 1099 aa16.97■□□□□ 0.31
HDAC6-213ENST00000462730 TOMM22Q9NS69 142 aa16.97■□□□□ 0.31
HDAC6-213ENST00000462730 MYH2Q9UKX2 1941 aa16.97■□□□□ 0.31
HDAC6-213ENST00000462730 MINDY4BA8MYZ0 360 aa16.97■□□□□ 0.31
HDAC6-213ENST00000462730 ZBTB7AO95365 584 aa16.97■□□□□ 0.31
HDAC6-213ENST00000462730 TMEM67Q5HYA8 995 aa16.97■□□□□ 0.31
HDAC6-213ENST00000462730 MFSD14BQ5SR56 506 aa16.97■□□□□ 0.31
HDAC6-213ENST00000462730 GAS2L3Q86XJ1 694 aa16.97■□□□□ 0.31
HDAC6-213ENST00000462730 EYA3Q99504 573 aa16.97■□□□□ 0.31
HDAC6-213ENST00000462730 SNED1Q8TER0 1413 aa16.96■□□□□ 0.31
HDAC6-213ENST00000462730 PPFIA3O75145 1194 aa16.96■□□□□ 0.31
HDAC6-213ENST00000462730 DIXDC1Q155Q3 683 aa16.96■□□□□ 0.31
HDAC6-213ENST00000462730 RNF41Q9H4P4 317 aaPredicted RBP16.96■□□□□ 0.31
HDAC6-213ENST00000462730 LAMB1P07942 1786 aa16.96■□□□□ 0.31
HDAC6-213ENST00000462730 FAM205AQ6ZU69 1335 aa16.95■□□□□ 0.3
HDAC6-213ENST00000462730 IFIT3O14879 490 aaKnown RBP16.95■□□□□ 0.3
HDAC6-213ENST00000462730 DHX16O60231 1041 aaKnown RBP16.95■□□□□ 0.3
HDAC6-213ENST00000462730 DOK7Q18PE1 504 aa16.95■□□□□ 0.3
HDAC6-213ENST00000462730 CSPP1Q1MSJ5 1256 aa16.95■□□□□ 0.3
HDAC6-213ENST00000462730 NFXL1Q6ZNB6 911 aa16.95■□□□□ 0.3
HDAC6-213ENST00000462730 IGDCC4Q8TDY8 1250 aa16.95■□□□□ 0.3
HDAC6-213ENST00000462730 TBC1D22AQ8WUA7 517 aa16.95■□□□□ 0.3
HDAC6-213ENST00000462730 C7orf43Q8WVR3 580 aa16.95■□□□□ 0.3
HDAC6-213ENST00000462730 CRNKL1Q9BZJ0 848 aaKnown RBP16.95■□□□□ 0.3
HDAC6-213ENST00000462730 LY9Q9HBG7 655 aa16.95■□□□□ 0.3
HDAC6-213ENST00000462730 SENP2Q9HC62 589 aa16.95■□□□□ 0.3
HDAC6-213ENST00000462730 ZSWIM5Q9P217 1185 aa16.95■□□□□ 0.3
HDAC6-213ENST00000462730 ANAPC4Q9UJX5 808 aa16.95■□□□□ 0.3
HDAC6-213ENST00000462730 GTF2IP78347 998 aa16.95■□□□□ 0.3
HDAC6-213ENST00000462730 GSTO1P78417 241 aa16.95■□□□□ 0.3
HDAC6-213ENST00000462730 RESTQ13127 1097 aa16.95■□□□□ 0.3
HDAC6-213ENST00000462730 ZSCAN23Q3MJ62 389 aa16.95■□□□□ 0.3
HDAC6-213ENST00000462730 MROH7-TTC4A0A0A0MT08 1334 aa16.94■□□□□ 0.3
HDAC6-213ENST00000462730 CPLX1O14810 134 aa16.94■□□□□ 0.3
HDAC6-213ENST00000462730 KRT85P78386 507 aa16.94■□□□□ 0.3
HDAC6-213ENST00000462730 FAM173BQ6P4H8 233 aa16.94■□□□□ 0.3
HDAC6-213ENST00000462730 GIMAP6Q6P9H5 292 aa16.94■□□□□ 0.3
HDAC6-213ENST00000462730 FBXW7Q969H0 707 aa16.94■□□□□ 0.3
HDAC6-213ENST00000462730 CYP2D7A0A087X1C5 515 aa16.93■□□□□ 0.3
HDAC6-213ENST00000462730 METAP2P50579 478 aaKnown RBP eCLIP16.93■□□□□ 0.3
HDAC6-213ENST00000462730 APOA5Q6Q788 366 aa16.93■□□□□ 0.3
HDAC6-213ENST00000462730 TMEM63CQ9P1W3 806 aa16.93■□□□□ 0.3
HDAC6-213ENST00000462730 G3V3G9 751 aa16.93■□□□□ 0.3
HDAC6-213ENST00000462730 SMIM22K7EJ46 135 aa16.93■□□□□ 0.3
HDAC6-213ENST00000462730 FDPSP14324 419 aaKnown RBP16.93■□□□□ 0.3
HDAC6-213ENST00000462730 DCAF8Q5TAQ9 597 aa16.93■□□□□ 0.3
HDAC6-213ENST00000462730 CTR9Q6PD62 1173 aa16.93■□□□□ 0.3
HDAC6-213ENST00000462730 SGMS1Q86VZ5 419 aa16.93■□□□□ 0.3
HDAC6-213ENST00000462730 RTFDC1Q9BY42 306 aaPredicted RBP16.93■□□□□ 0.3
HDAC6-213ENST00000462730 MTFR1LQ9H019 292 aa16.93■□□□□ 0.3
HDAC6-213ENST00000462730 DBNDD1Q9H9R9 158 aa16.93■□□□□ 0.3
HDAC6-213ENST00000462730 ESPNB1AK53 854 aa16.92■□□□□ 0.3
HDAC6-213ENST00000462730 ZBTB43O43298 467 aa16.92■□□□□ 0.3
HDAC6-213ENST00000462730 DPEP1P16444 411 aa16.92■□□□□ 0.3
HDAC6-213ENST00000462730 LIFRP42702 1097 aa16.92■□□□□ 0.3
HDAC6-213ENST00000462730 UBE2HP62256 183 aa16.92■□□□□ 0.3
HDAC6-213ENST00000462730 SART3Q15020 963 aaKnown RBP16.92■□□□□ 0.3
HDAC6-213ENST00000462730 MICU3Q86XE3 530 aa16.92■□□□□ 0.3
HDAC6-213ENST00000462730 TTLL6Q8N841 843 aa16.92■□□□□ 0.3
HDAC6-213ENST00000462730 ZKSCAN3Q9BRR0 538 aa16.92■□□□□ 0.3
HDAC6-213ENST00000462730 DCP1AQ9NPI6 582 aaPredicted RBP16.92■□□□□ 0.3
HDAC6-213ENST00000462730 ATF5Q9Y2D1 282 aaPredicted RBP16.92■□□□□ 0.3
HDAC6-213ENST00000462730 NAV1Q8NEY1 1877 aa16.92■□□□□ 0.3
HDAC6-213ENST00000462730 CDK5RAP2Q96SN8 1893 aa16.91■□□□□ 0.3
HDAC6-213ENST00000462730 CCDC69A6NI79 296 aa16.91■□□□□ 0.3
HDAC6-213ENST00000462730 GOLGA8AA7E2F4 631 aa16.91■□□□□ 0.3
HDAC6-213ENST00000462730 C21orf2O43822 256 aa16.91■□□□□ 0.3
HDAC6-213ENST00000462730 RXRAP19793 462 aa16.91■□□□□ 0.3
HDAC6-213ENST00000462730 ZNF445P59923 1031 aa16.91■□□□□ 0.3
HDAC6-213ENST00000462730 R3HDM1Q15032 1099 aaKnown RBP16.91■□□□□ 0.3
HDAC6-213ENST00000462730 TPRNQ4KMQ1 711 aa16.91■□□□□ 0.3
HDAC6-213ENST00000462730 CC2D2BQ6DHV5 1058 aa16.91■□□□□ 0.3
HDAC6-213ENST00000462730 ZSCAN16Q9H4T2 348 aaPredicted RBP16.91■□□□□ 0.3
HDAC6-213ENST00000462730 ATP8A2Q9NTI2 1148 aa16.91■□□□□ 0.3
HDAC6-213ENST00000462730 ORC3Q9UBD5 711 aaPredicted RBP16.91■□□□□ 0.3
HDAC6-213ENST00000462730 ZNF646O15015 1829 aaPredicted RBP16.91■□□□□ 0.3
HDAC6-213ENST00000462730 USP17L12C9JPN9 530 aa16.91■□□□□ 0.3
HDAC6-213ENST00000462730 USP17L21D6R901 530 aa16.91■□□□□ 0.3
HDAC6-213ENST00000462730 BAG3O95817 575 aa16.91■□□□□ 0.3
HDAC6-213ENST00000462730 LDHCP07864 332 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms