RNA–Protein interactions for RNA: ENST00000462687.1

RIT1-204, Transcript of Ras like without CAAX 1, human

TSL 3

Gene RIT1, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RIT1-204	ENST00000462687	BCL2L13	Q9BXK5	485 aa		13.62	□□□□□ -0.23
RIT1-204	ENST00000462687	DDX60	Q8IY21	1712 aa	Known RBP	13.61	□□□□□ -0.23
RIT1-204	ENST00000462687	ADCY9	O60503	1353 aa		13.61	□□□□□ -0.23
RIT1-204	ENST00000462687	LYSMD3	Q7Z3D4	306 aa		13.61	□□□□□ -0.23
RIT1-204	ENST00000462687	NFKBIE	O00221	500 aa		13.6	□□□□□ -0.23
RIT1-204	ENST00000462687	FBXO45	P0C2W1	286 aa		13.6	□□□□□ -0.23
RIT1-204	ENST00000462687	LMNB1	P20700	586 aa		13.6	□□□□□ -0.23
RIT1-204	ENST00000462687	TRIM28	Q13263	835 aa	Known RBP	13.6	□□□□□ -0.23
RIT1-204	ENST00000462687	CRY2	Q49AN0	593 aa		13.6	□□□□□ -0.23
RIT1-204	ENST00000462687	CCDC93	Q567U6	631 aa		13.6	□□□□□ -0.23
RIT1-204	ENST00000462687	SOGA3	Q5TF21	947 aa		13.6	□□□□□ -0.23
RIT1-204	ENST00000462687	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.6	□□□□□ -0.23
RIT1-204	ENST00000462687	DNAAF4	Q8WXU2	420 aa		13.6	□□□□□ -0.23
RIT1-204	ENST00000462687	TAOK3	Q9H2K8	898 aa		13.6	□□□□□ -0.23
RIT1-204	ENST00000462687	RNF123	Q5XPI4	1314 aa		13.6	□□□□□ -0.23
RIT1-204	ENST00000462687	DICER1	Q9UPY3	1922 aa	Known RBP	13.59	□□□□□ -0.23
RIT1-204	ENST00000462687	IGKV5-2	P06315	115 aa		13.59	□□□□□ -0.23
RIT1-204	ENST00000462687	HOXA10	P31260	410 aa	Predicted RBP	13.59	□□□□□ -0.23
RIT1-204	ENST00000462687	ZNF385C	Q66K41	422 aa	Predicted RBP	13.59	□□□□□ -0.23
RIT1-204	ENST00000462687	CRAMP1	Q96RY5	1269 aa		13.59	□□□□□ -0.23
RIT1-204	ENST00000462687	ABCC4	O15439	1325 aa		13.59	□□□□□ -0.23
RIT1-204	ENST00000462687	NEURL1B	A8MQ27	555 aa		13.58	□□□□□ -0.24
RIT1-204	ENST00000462687	PCCA	P05165	728 aa	Predicted RBP	13.58	□□□□□ -0.24
RIT1-204	ENST00000462687	PRELP	P51888	382 aa		13.58	□□□□□ -0.24
RIT1-204	ENST00000462687	PRICKLE2	Q7Z3G6	844 aa		13.58	□□□□□ -0.24
RIT1-204	ENST00000462687	SLC51A	Q86UW1	340 aa		13.58	□□□□□ -0.24
RIT1-204	ENST00000462687	RTKN2	Q8IZC4	609 aa		13.58	□□□□□ -0.24
RIT1-204	ENST00000462687	SVOP	Q8N4V2	548 aa		13.58	□□□□□ -0.24
RIT1-204	ENST00000462687	C7orf43	Q8WVR3	580 aa		13.58	□□□□□ -0.24
RIT1-204	ENST00000462687	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.58	□□□□□ -0.24
RIT1-204	ENST00000462687	MYH3	P11055	1940 aa		13.58	□□□□□ -0.24
RIT1-204	ENST00000462687	PDE8A	O60658	829 aa		13.57	□□□□□ -0.24
RIT1-204	ENST00000462687	HSP90B1	P14625	803 aa	Known RBP	13.57	□□□□□ -0.24
RIT1-204	ENST00000462687	RNF144A	P50876	292 aa	Predicted RBP	13.57	□□□□□ -0.24
RIT1-204	ENST00000462687	UBE3B	Q7Z3V4	1068 aa		13.57	□□□□□ -0.24
RIT1-204	ENST00000462687	SSH1	Q8WYL5	1049 aa		13.57	□□□□□ -0.24
RIT1-204	ENST00000462687	SMC4	Q9NTJ3	1288 aa		13.57	□□□□□ -0.24
RIT1-204	ENST00000462687	RIC1	Q4ADV7	1423 aa		13.56	□□□□□ -0.24
RIT1-204	ENST00000462687	SPEF2	Q9C093	1822 aa		13.56	□□□□□ -0.24
RIT1-204	ENST00000462687	BBOX1	O75936	387 aa		13.56	□□□□□ -0.24
RIT1-204	ENST00000462687	SLURP2	P0DP57	97 aa		13.56	□□□□□ -0.24
RIT1-204	ENST00000462687	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
RIT1-204	ENST00000462687	GRAP	Q13588	217 aa		13.56	□□□□□ -0.24
RIT1-204	ENST00000462687	TRMT2A	Q8IZ69	625 aa	Known RBP	13.56	□□□□□ -0.24
RIT1-204	ENST00000462687	GRAPL	Q8TC17	118 aa	Predicted RBP	13.56	□□□□□ -0.24
RIT1-204	ENST00000462687	WHAMM	Q8TF30	809 aa		13.56	□□□□□ -0.24
RIT1-204	ENST00000462687	TIAM2	Q8IVF5	1701 aa		13.56	□□□□□ -0.24
RIT1-204	ENST00000462687	GSK3A	P49840	483 aa		13.55	□□□□□ -0.24
RIT1-204	ENST00000462687	GCKR	Q14397	625 aa		13.55	□□□□□ -0.24
RIT1-204	ENST00000462687	SF3B3	Q15393	1217 aa	Known RBP	13.55	□□□□□ -0.24
RIT1-204	ENST00000462687	CCDC152	Q4G0S7	254 aa		13.55	□□□□□ -0.24
RIT1-204	ENST00000462687	LINS1	Q8NG48	757 aa		13.55	□□□□□ -0.24
RIT1-204	ENST00000462687	CELF1	Q92879	486 aa	Known RBP	13.55	□□□□□ -0.24
RIT1-204	ENST00000462687	RRAGC	Q9HB90	399 aa		13.55	□□□□□ -0.24
RIT1-204	ENST00000462687	SEC31B	Q9NQW1	1179 aa		13.55	□□□□□ -0.24
RIT1-204	ENST00000462687	MEN1	O00255	615 aa		13.54	□□□□□ -0.24
RIT1-204	ENST00000462687	RHOQ	P17081	205 aa		13.54	□□□□□ -0.24
RIT1-204	ENST00000462687	CC2D2B	Q6DHV5	1058 aa		13.54	□□□□□ -0.24
RIT1-204	ENST00000462687	CUEDC1	Q9NWM3	386 aa	Predicted RBP	13.54	□□□□□ -0.24
RIT1-204	ENST00000462687	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.54	□□□□□ -0.24
RIT1-204	ENST00000462687	CHMP3	Q9Y3E7	222 aa		13.54	□□□□□ -0.24
RIT1-204	ENST00000462687	ATP6V0A2	Q9Y487	856 aa		13.54	□□□□□ -0.24
RIT1-204	ENST00000462687		H7C1W4	665 aa		13.53	□□□□□ -0.24
RIT1-204	ENST00000462687	IARS	P41252	1262 aa	Known RBP	13.53	□□□□□ -0.24
RIT1-204	ENST00000462687	RPS8	P62241	208 aa	Known RBP	13.53	□□□□□ -0.24
RIT1-204	ENST00000462687	BEND3	Q5T5X7	828 aa		13.53	□□□□□ -0.24
RIT1-204	ENST00000462687	DPP8	Q6V1X1	898 aa	Predicted RBP	13.53	□□□□□ -0.24
RIT1-204	ENST00000462687	SP8	Q8IXZ3	490 aa		13.53	□□□□□ -0.24
RIT1-204	ENST00000462687	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.53	□□□□□ -0.24
RIT1-204	ENST00000462687	SRCIN1	Q9C0H9	1055 aa		13.53	□□□□□ -0.24
RIT1-204	ENST00000462687	NMRK2	Q9NPI5	230 aa		13.53	□□□□□ -0.24
RIT1-204	ENST00000462687	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.53	□□□□□ -0.24
RIT1-204	ENST00000462687	KDM2B	Q8NHM5	1336 aa		13.53	□□□□□ -0.24
RIT1-204	ENST00000462687	RNF225	M0QZC1	329 aa	Predicted RBP	13.52	□□□□□ -0.25
RIT1-204	ENST00000462687	ALDH1L2	Q3SY69	923 aa		13.52	□□□□□ -0.25
RIT1-204	ENST00000462687	RNF20	Q5VTR2	975 aa		13.52	□□□□□ -0.25
RIT1-204	ENST00000462687	LARGE2	Q8N3Y3	721 aa		13.52	□□□□□ -0.25
RIT1-204	ENST00000462687	TMEM151A	Q8N4L1	468 aa		13.52	□□□□□ -0.25
RIT1-204	ENST00000462687	KCTD17	Q8N5Z5	321 aa		13.52	□□□□□ -0.25
RIT1-204	ENST00000462687	JDP2	Q8WYK2	163 aa		13.52	□□□□□ -0.25
RIT1-204	ENST00000462687	NOB1	Q9ULX3	412 aa	Known RBP	13.52	□□□□□ -0.25
RIT1-204	ENST00000462687	CDHR2	Q9BYE9	1310 aa		13.52	□□□□□ -0.25
RIT1-204	ENST00000462687	LTBP3	Q9NS15	1303 aa		13.52	□□□□□ -0.25
RIT1-204	ENST00000462687		A0A1W2PRU2	124 aa		13.51	□□□□□ -0.25
RIT1-204	ENST00000462687	PPIP5K2	O43314	1243 aa		13.51	□□□□□ -0.25
RIT1-204	ENST00000462687	CTSW	P56202	376 aa		13.51	□□□□□ -0.25
RIT1-204	ENST00000462687	NR1H3	Q13133	447 aa		13.51	□□□□□ -0.25
RIT1-204	ENST00000462687	ANKRD18A	Q8IVF6	992 aa		13.51	□□□□□ -0.25
RIT1-204	ENST00000462687	TTLL11	Q8NHH1	800 aa		13.51	□□□□□ -0.25
RIT1-204	ENST00000462687	GREM2	Q9H772	168 aa		13.51	□□□□□ -0.25
RIT1-204	ENST00000462687	PTPRC	P08575	1304 aa		13.5	□□□□□ -0.25
RIT1-204	ENST00000462687	GLTPD2	A6NH11	291 aa		13.5	□□□□□ -0.25
RIT1-204	ENST00000462687	DDN	O94850	711 aa	Predicted RBP	13.5	□□□□□ -0.25
RIT1-204	ENST00000462687	GPC1	P35052	558 aa		13.5	□□□□□ -0.25
RIT1-204	ENST00000462687	MCCD1	P59942	119 aa	Predicted RBP	13.5	□□□□□ -0.25
RIT1-204	ENST00000462687	ERVK-9	P63128	1117 aa		13.5	□□□□□ -0.25
RIT1-204	ENST00000462687	AOC3	Q16853	763 aa		13.5	□□□□□ -0.25
RIT1-204	ENST00000462687	SUPT20H	Q8NEM7	779 aa		13.5	□□□□□ -0.25
RIT1-204	ENST00000462687	FRAT1	Q92837	279 aa	Predicted RBP	13.5	□□□□□ -0.25
RIT1-204	ENST00000462687	PSMD1	Q99460	953 aa		13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms