RNA–Protein interactions for RNA: ENST00000462537.3

CDKN1A-206, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 3

Gene CDKN1A, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-206ENST00000462537 TTF1Q15361 905 aaPredicted RBP22.55■■□□□ 1.2
CDKN1A-206ENST00000462537 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.55■■□□□ 1.2
CDKN1A-206ENST00000462537 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.55■■□□□ 1.2
CDKN1A-206ENST00000462537 RNF186Q9NXI6 227 aa22.55■■□□□ 1.2
CDKN1A-206ENST00000462537 CYP7A1P22680 504 aa22.54■■□□□ 1.2
CDKN1A-206ENST00000462537 MAP3K12Q12852 859 aa22.54■■□□□ 1.2
CDKN1A-206ENST00000462537 ADGRA1Q86SQ6 560 aa22.54■■□□□ 1.2
CDKN1A-206ENST00000462537 MAGEB6Q8N7X4 407 aa22.54■■□□□ 1.2
CDKN1A-206ENST00000462537 SH3RF3Q8TEJ3 882 aaPredicted RBP22.54■■□□□ 1.2
CDKN1A-206ENST00000462537 OPTNQ96CV9 577 aa22.54■■□□□ 1.2
CDKN1A-206ENST00000462537 SAGE1Q9NXZ1 904 aa22.54■■□□□ 1.2
CDKN1A-206ENST00000462537 GOLIM4O00461 696 aa22.53■■□□□ 1.2
CDKN1A-206ENST00000462537 PLCG2P16885 1265 aa22.53■■□□□ 1.2
CDKN1A-206ENST00000462537 DDTLA6NHG4 134 aaPredicted RBP22.52■■□□□ 1.2
CDKN1A-206ENST00000462537 MANSC4A6NHS7 340 aaPredicted RBP22.52■■□□□ 1.2
CDKN1A-206ENST00000462537 GJA5P36382 358 aa22.52■■□□□ 1.2
CDKN1A-206ENST00000462537 TM4SF4P48230 202 aa22.52■■□□□ 1.2
CDKN1A-206ENST00000462537 ZKSCAN4Q969J2 545 aaPredicted RBP22.52■■□□□ 1.2
CDKN1A-206ENST00000462537 BOLA2Q9H3K6 86 aa22.52■■□□□ 1.2
CDKN1A-206ENST00000462537 LAMB1P07942 1786 aa22.52■■□□□ 1.2
CDKN1A-206ENST00000462537 ATP5JP18859 108 aa22.51■■□□□ 1.19
CDKN1A-206ENST00000462537 SH3BP5LQ7L8J4 393 aa22.51■■□□□ 1.19
CDKN1A-206ENST00000462537 TNS4Q8IZW8 715 aa22.51■■□□□ 1.19
CDKN1A-206ENST00000462537 OTUD5Q96G74 571 aa22.51■■□□□ 1.19
CDKN1A-206ENST00000462537 SUPT16HQ9Y5B9 1047 aaKnown RBP22.51■■□□□ 1.19
CDKN1A-206ENST00000462537 CDK5RAP2Q96SN8 1893 aa22.51■■□□□ 1.19
CDKN1A-206ENST00000462537 NPM3O75607 178 aaKnown RBP22.5■■□□□ 1.19
CDKN1A-206ENST00000462537 INPP5BP32019 993 aa22.5■■□□□ 1.19
CDKN1A-206ENST00000462537 PPP4CP60510 307 aa22.5■■□□□ 1.19
CDKN1A-206ENST00000462537 DYNLL1P63167 89 aaKnown RBP22.5■■□□□ 1.19
CDKN1A-206ENST00000462537 MIGA1Q8NAN2 632 aa22.5■■□□□ 1.19
CDKN1A-206ENST00000462537 CNKSR2Q8WXI2 1034 aa22.5■■□□□ 1.19
CDKN1A-206ENST00000462537 PAG1Q9NWQ8 432 aa22.5■■□□□ 1.19
CDKN1A-206ENST00000462537 SNCAIPQ9Y6H5 919 aa22.5■■□□□ 1.19
CDKN1A-206ENST00000462537 FOCADQ5VW36 1801 aa22.5■■□□□ 1.19
CDKN1A-206ENST00000462537 INHBEP58166 350 aa22.49■■□□□ 1.19
CDKN1A-206ENST00000462537 TGFBRAP1Q8WUH2 860 aa22.49■■□□□ 1.19
CDKN1A-206ENST00000462537 EDC3Q96F86 508 aaKnown RBP22.49■■□□□ 1.19
CDKN1A-206ENST00000462537 GPATCH3Q96I76 525 aa22.49■■□□□ 1.19
CDKN1A-206ENST00000462537 OSBPL5Q9H0X9 879 aaPredicted RBP22.49■■□□□ 1.19
CDKN1A-206ENST00000462537 ATRNL1Q5VV63 1379 aa22.49■■□□□ 1.19
CDKN1A-206ENST00000462537 SLC9C2Q5TAH2 1124 aa22.48■■□□□ 1.19
CDKN1A-206ENST00000462537 ERO1BQ86YB8 467 aa22.48■■□□□ 1.19
CDKN1A-206ENST00000462537 MAPKAPK5Q8IW41 473 aa22.48■■□□□ 1.19
CDKN1A-206ENST00000462537 HAUS7Q99871 368 aa22.48■■□□□ 1.19
CDKN1A-206ENST00000462537 ZBTB47Q9UFB7 747 aaPredicted RBP22.48■■□□□ 1.19
CDKN1A-206ENST00000462537 ZNF112Q9UJU3 913 aa22.48■■□□□ 1.19
CDKN1A-206ENST00000462537 COL2A1P02458 1487 aaPredicted RBP22.47■■□□□ 1.19
CDKN1A-206ENST00000462537 SPDYE5A6NIY4 337 aa22.47■■□□□ 1.19
CDKN1A-206ENST00000462537 AAMPQ13685 434 aa22.47■■□□□ 1.19
CDKN1A-206ENST00000462537 TMED8Q6PL24 325 aaPredicted RBP22.47■■□□□ 1.19
CDKN1A-206ENST00000462537 CERS3Q8IU89 383 aa22.47■■□□□ 1.19
CDKN1A-206ENST00000462537 ECHDC1Q9NTX5 307 aa22.47■■□□□ 1.19
CDKN1A-206ENST00000462537 FLT1P17948 1338 aa22.47■■□□□ 1.19
CDKN1A-206ENST00000462537 TBC1D8O95759 1140 aa22.46■■□□□ 1.19
CDKN1A-206ENST00000462537 PDE6AP16499 860 aa22.46■■□□□ 1.19
CDKN1A-206ENST00000462537 GTF2A2P52657 109 aa22.46■■□□□ 1.19
CDKN1A-206ENST00000462537 IFNL1Q8IU54 200 aa22.46■■□□□ 1.19
CDKN1A-206ENST00000462537 EXOC6Q8TAG9 804 aa22.46■■□□□ 1.19
CDKN1A-206ENST00000462537 CASP8AP2Q9UKL3 1982 aa22.46■■□□□ 1.19
CDKN1A-206ENST00000462537 ALDH1A1P00352 501 aa22.45■■□□□ 1.18
CDKN1A-206ENST00000462537 SLURP2P0DP57 97 aa22.45■■□□□ 1.18
CDKN1A-206ENST00000462537 USP5P45974 858 aa22.45■■□□□ 1.18
CDKN1A-206ENST00000462537 OTUD7BQ6GQQ9 843 aa22.45■■□□□ 1.18
CDKN1A-206ENST00000462537 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.45■■□□□ 1.18
CDKN1A-206ENST00000462537 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.45■■□□□ 1.18
CDKN1A-206ENST00000462537 ZNF532Q9HCE3 1301 aa22.45■■□□□ 1.18
CDKN1A-206ENST00000462537 CCL15-CCL14A0A0B4J2E2 113 aa22.44■■□□□ 1.18
CDKN1A-206ENST00000462537 MAGEB6P1A0A0J9YX57 407 aa22.44■■□□□ 1.18
CDKN1A-206ENST00000462537 PHF20L1A8MW92 1017 aa22.44■■□□□ 1.18
CDKN1A-206ENST00000462537 IGF2BP3O00425 579 aaKnown RBP eCLIP22.44■■□□□ 1.18
CDKN1A-206ENST00000462537 MYH7P12883 1935 aa22.44■■□□□ 1.18
CDKN1A-206ENST00000462537 PPIL2Q13356 520 aa22.44■■□□□ 1.18
CDKN1A-206ENST00000462537 CCL15Q16663 113 aa22.44■■□□□ 1.18
CDKN1A-206ENST00000462537 NOL9Q5SY16 702 aaKnown RBP22.44■■□□□ 1.18
CDKN1A-206ENST00000462537 TSHZ3Q63HK5 1081 aa22.44■■□□□ 1.18
CDKN1A-206ENST00000462537 DHX36Q9H2U1 1008 aaKnown RBP22.44■■□□□ 1.18
CDKN1A-206ENST00000462537 PICK1Q9NRD5 415 aa22.44■■□□□ 1.18
CDKN1A-206ENST00000462537 DOCK1Q14185 1865 aa22.43■■□□□ 1.18
CDKN1A-206ENST00000462537 FAM196BA6NMK8 535 aa22.43■■□□□ 1.18
CDKN1A-206ENST00000462537 PPATQ06203 517 aa22.43■■□□□ 1.18
CDKN1A-206ENST00000462537 HDAC1Q13547 482 aaPredicted RBP22.43■■□□□ 1.18
CDKN1A-206ENST00000462537 GCC1Q96CN9 775 aa22.43■■□□□ 1.18
CDKN1A-206ENST00000462537 MS4A4AQ96JQ5 239 aa22.43■■□□□ 1.18
CDKN1A-206ENST00000462537 SAP30BPQ9UHR5 308 aaKnown RBP22.43■■□□□ 1.18
CDKN1A-206ENST00000462537 MYH1P12882 1939 aa22.42■■□□□ 1.18
CDKN1A-206ENST00000462537 IRF6O14896 467 aa22.42■■□□□ 1.18
CDKN1A-206ENST00000462537 TBC1D12O60347 775 aa22.42■■□□□ 1.18
CDKN1A-206ENST00000462537 MAP3K10Q02779 954 aa22.42■■□□□ 1.18
CDKN1A-206ENST00000462537 SNAPC2Q13487 334 aa22.42■■□□□ 1.18
CDKN1A-206ENST00000462537 ANKRD45Q5TZF3 282 aa22.42■■□□□ 1.18
CDKN1A-206ENST00000462537 SCYL3Q8IZE3 742 aa22.42■■□□□ 1.18
CDKN1A-206ENST00000462537 TRIM34Q9BYJ4 488 aa22.42■■□□□ 1.18
CDKN1A-206ENST00000462537 SIPA1L1O43166 1804 aa22.41■■□□□ 1.18
CDKN1A-206ENST00000462537 TESPA1A2RU30 521 aaPredicted RBP22.41■■□□□ 1.18
CDKN1A-206ENST00000462537 CETPP11597 493 aa22.41■■□□□ 1.18
CDKN1A-206ENST00000462537 SLC4A8Q2Y0W8 1093 aa22.41■■□□□ 1.18
CDKN1A-206ENST00000462537 CRACR2BQ8N4Y2 399 aaPredicted RBP22.41■■□□□ 1.18
CDKN1A-206ENST00000462537 BRI3BPQ8WY22 251 aa22.41■■□□□ 1.18
CDKN1A-206ENST00000462537 RIOK1Q9BRS2 568 aaKnown RBP22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms