RNA–Protein interactions for RNA: ENST00000462207.1

PBRM1-219, Transcript of polybromo 1, humanhuman

TSL 2

Gene PBRM1, Length 1,921 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-219ENST00000462207 RPAP1Q9BWH6 1393 aaPredicted RBP16.09■□□□□ 0.17
PBRM1-219ENST00000462207 LAMA4Q16363 1823 aa16.08■□□□□ 0.17
PBRM1-219ENST00000462207 HIRAP54198 1017 aaPredicted RBP16.08■□□□□ 0.16
PBRM1-219ENST00000462207 ALX1Q15699 326 aa16.08■□□□□ 0.16
PBRM1-219ENST00000462207 SPDYE2Q495Y8 402 aa16.08■□□□□ 0.16
PBRM1-219ENST00000462207 ZFPM1Q8IX07 1006 aa16.08■□□□□ 0.16
PBRM1-219ENST00000462207 NACAP1Q9BZK3 213 aa16.08■□□□□ 0.16
PBRM1-219ENST00000462207 ATP8A2Q9NTI2 1148 aa16.08■□□□□ 0.16
PBRM1-219ENST00000462207 FAM198AQ9UFP1 575 aa16.08■□□□□ 0.16
PBRM1-219ENST00000462207 RBM19Q9Y4C8 960 aaKnown RBP16.08■□□□□ 0.16
PBRM1-219ENST00000462207 LAMB1P07942 1786 aa16.08■□□□□ 0.16
PBRM1-219ENST00000462207 TCP10L2B9ZVM9 353 aa16.07■□□□□ 0.16
PBRM1-219ENST00000462207 CYP21A2P08686 494 aa16.07■□□□□ 0.16
PBRM1-219ENST00000462207 TCP10Q12799 353 aa16.07■□□□□ 0.16
PBRM1-219ENST00000462207 CTR9Q6PD62 1173 aa16.07■□□□□ 0.16
PBRM1-219ENST00000462207 NBPF3Q9H094 633 aa16.07■□□□□ 0.16
PBRM1-219ENST00000462207 VEZTQ9HBM0 779 aa16.07■□□□□ 0.16
PBRM1-219ENST00000462207 MCM9Q9NXL9 1143 aa16.07■□□□□ 0.16
PBRM1-219ENST00000462207 ZMYM6O95789 1325 aa16.07■□□□□ 0.16
PBRM1-219ENST00000462207 WDR90Q96KV7 1748 aa16.07■□□□□ 0.16
PBRM1-219ENST00000462207 USP17L12C9JPN9 530 aa16.07■□□□□ 0.16
PBRM1-219ENST00000462207 USP17L21D6R901 530 aa16.07■□□□□ 0.16
PBRM1-219ENST00000462207 EPB41L2O43491 1005 aaKnown RBP16.07■□□□□ 0.16
PBRM1-219ENST00000462207 MMP14P50281 582 aa16.07■□□□□ 0.16
PBRM1-219ENST00000462207 MINDY4BA8MYZ0 360 aa16.06■□□□□ 0.16
PBRM1-219ENST00000462207 POTECB2RU33 542 aa16.06■□□□□ 0.16
PBRM1-219ENST00000462207 RBM25P49756 843 aaKnown RBP16.06■□□□□ 0.16
PBRM1-219ENST00000462207 GIMAP6Q6P9H5 292 aa16.06■□□□□ 0.16
PBRM1-219ENST00000462207 TBC1D10CQ8IV04 446 aa16.06■□□□□ 0.16
PBRM1-219ENST00000462207 STK11IPQ8N1F8 1099 aa16.06■□□□□ 0.16
PBRM1-219ENST00000462207 IDI2Q9BXS1 227 aa16.06■□□□□ 0.16
PBRM1-219ENST00000462207 OSBPL5Q9H0X9 879 aaPredicted RBP16.06■□□□□ 0.16
PBRM1-219ENST00000462207 ADARB2Q9NS39 739 aaKnown RBP16.06■□□□□ 0.16
PBRM1-219ENST00000462207 TMOD2Q9NZR1 351 aa16.06■□□□□ 0.16
PBRM1-219ENST00000462207 CTNNA3Q9UI47 895 aa16.06■□□□□ 0.16
PBRM1-219ENST00000462207 SNX14Q9Y5W7 946 aa16.06■□□□□ 0.16
PBRM1-219ENST00000462207 MYO1BO43795 1136 aa16.06■□□□□ 0.16
PBRM1-219ENST00000462207 MCCP23508 829 aa16.06■□□□□ 0.16
PBRM1-219ENST00000462207 CTDSPL2Q05D32 466 aa16.06■□□□□ 0.16
PBRM1-219ENST00000462207 COL9A3Q14050 684 aaPredicted RBP16.06■□□□□ 0.16
PBRM1-219ENST00000462207 STOX1Q6ZVD7 989 aa16.06■□□□□ 0.16
PBRM1-219ENST00000462207 DDRGK1Q96HY6 314 aa16.06■□□□□ 0.16
PBRM1-219ENST00000462207 HACL1Q9UJ83 578 aa16.06■□□□□ 0.16
PBRM1-219ENST00000462207 TACC3Q9Y6A5 838 aa16.06■□□□□ 0.16
PBRM1-219ENST00000462207 CNTNAP1P78357 1384 aa16.05■□□□□ 0.16
PBRM1-219ENST00000462207 MYH1P12882 1939 aa16.05■□□□□ 0.16
PBRM1-219ENST00000462207 EPHX2P34913 555 aa16.05■□□□□ 0.16
PBRM1-219ENST00000462207 PPARAQ07869 468 aa16.05■□□□□ 0.16
PBRM1-219ENST00000462207 IMMTQ16891 758 aaKnown RBP16.05■□□□□ 0.16
PBRM1-219ENST00000462207 KCNB2Q92953 911 aa16.05■□□□□ 0.16
PBRM1-219ENST00000462207 ARPP21Q9UBL0 812 aaPredicted RBP16.05■□□□□ 0.16
PBRM1-219ENST00000462207 PLCD1P51178 756 aa16.04■□□□□ 0.16
PBRM1-219ENST00000462207 ADCK5Q3MIX3 580 aa16.04■□□□□ 0.16
PBRM1-219ENST00000462207 ANGEL2Q5VTE6 544 aaKnown RBP16.04■□□□□ 0.16
PBRM1-219ENST00000462207 SH3BP5LQ7L8J4 393 aa16.04■□□□□ 0.16
PBRM1-219ENST00000462207 CDAN1Q8IWY9 1227 aa16.04■□□□□ 0.16
PBRM1-219ENST00000462207 ZNF526Q8TF50 670 aaPredicted RBP16.04■□□□□ 0.16
PBRM1-219ENST00000462207 KIF2CQ99661 725 aa16.04■□□□□ 0.16
PBRM1-219ENST00000462207 INCENPQ9NQS7 918 aa16.04■□□□□ 0.16
PBRM1-219ENST00000462207 GGA3Q9NZ52 723 aa16.04■□□□□ 0.16
PBRM1-219ENST00000462207 SCN4AP35499 1836 aa16.04■□□□□ 0.16
PBRM1-219ENST00000462207 ZNF213O14771 459 aa16.04■□□□□ 0.16
PBRM1-219ENST00000462207 POLR3DP05423 398 aaPredicted RBP16.04■□□□□ 0.16
PBRM1-219ENST00000462207 SLURP2P0DP57 97 aa16.04■□□□□ 0.16
PBRM1-219ENST00000462207 TAF1DQ9H5J8 278 aaPredicted RBP16.04■□□□□ 0.16
PBRM1-219ENST00000462207 SIPA1L1O43166 1804 aa16.03■□□□□ 0.16
PBRM1-219ENST00000462207 DDTLA6NHG4 134 aaPredicted RBP16.03■□□□□ 0.16
PBRM1-219ENST00000462207 SBK1Q52WX2 424 aa16.03■□□□□ 0.16
PBRM1-219ENST00000462207 C12orf60Q5U649 245 aa16.03■□□□□ 0.16
PBRM1-219ENST00000462207 RNF20Q5VTR2 975 aa16.03■□□□□ 0.16
PBRM1-219ENST00000462207 NKX2-3Q8TAU0 364 aa16.03■□□□□ 0.16
PBRM1-219ENST00000462207 DYNLL2Q96FJ2 89 aa16.03■□□□□ 0.16
PBRM1-219ENST00000462207 TMEM39BQ9GZU3 492 aa16.03■□□□□ 0.16
PBRM1-219ENST00000462207 NEDD4P46934 1319 aa16.02■□□□□ 0.16
PBRM1-219ENST00000462207 E7EWF7 191 aa16.02■□□□□ 0.15
PBRM1-219ENST00000462207 ENTPD3O75355 529 aa16.02■□□□□ 0.15
PBRM1-219ENST00000462207 NPM3O75607 178 aaKnown RBP16.02■□□□□ 0.15
PBRM1-219ENST00000462207 CPA1P15085 419 aa16.02■□□□□ 0.15
PBRM1-219ENST00000462207 ZKSCAN1P17029 563 aaPredicted RBP16.02■□□□□ 0.15
PBRM1-219ENST00000462207 EAPPQ56P03 285 aaPredicted RBP16.02■□□□□ 0.15
PBRM1-219ENST00000462207 ZSCAN29Q8IWY8 852 aaPredicted RBP16.02■□□□□ 0.15
PBRM1-219ENST00000462207 SLC44A5Q8NCS7 719 aa16.02■□□□□ 0.15
PBRM1-219ENST00000462207 ANAPC4Q9UJX5 808 aa16.02■□□□□ 0.15
PBRM1-219ENST00000462207 ROBO3Q96MS0 1386 aa16.01■□□□□ 0.15
PBRM1-219ENST00000462207 IQCA1LA6NCM1 817 aa16.01■□□□□ 0.15
PBRM1-219ENST00000462207 ANAPC15P60006 121 aa16.01■□□□□ 0.15
PBRM1-219ENST00000462207 RASA3Q14644 834 aa16.01■□□□□ 0.15
PBRM1-219ENST00000462207 FKBP1CQ5VVH2 108 aa16.01■□□□□ 0.15
PBRM1-219ENST00000462207 FAM151AQ8WW52 585 aa16.01■□□□□ 0.15
PBRM1-219ENST00000462207 JAKMIP1Q96N16 626 aaKnown RBP16.01■□□□□ 0.15
PBRM1-219ENST00000462207 RRAGCQ9HB90 399 aa16.01■□□□□ 0.15
PBRM1-219ENST00000462207 NMRK2Q9NPI5 230 aa16.01■□□□□ 0.15
PBRM1-219ENST00000462207 ATRNL1Q5VV63 1379 aa16.01■□□□□ 0.15
PBRM1-219ENST00000462207 COL2A1P02458 1487 aaPredicted RBP16■□□□□ 0.15
PBRM1-219ENST00000462207 FAM196BA6NMK8 535 aa16■□□□□ 0.15
PBRM1-219ENST00000462207 PRDM1O75626 825 aa16■□□□□ 0.15
PBRM1-219ENST00000462207 POTEIP0CG38 1075 aa16■□□□□ 0.15
PBRM1-219ENST00000462207 POTEJP0CG39 1038 aa16■□□□□ 0.15
PBRM1-219ENST00000462207 AMOTL1Q8IY63 956 aa16■□□□□ 0.15
PBRM1-219ENST00000462207 UPF3BQ9BZI7 483 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms