RNA–Protein interactions for RNA: ENST00000462125.5

C9orf3-210, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-210ENST00000462125 RAI14Q9P0K7 980 aa16.21■□□□□ 0.19
C9orf3-210ENST00000462125 LRP2BPQ9P2M1 347 aa16.21■□□□□ 0.19
C9orf3-210ENST00000462125 EXOC6BQ9Y2D4 811 aa16.21■□□□□ 0.19
C9orf3-210ENST00000462125 MYH2Q9UKX2 1941 aa16.21■□□□□ 0.19
C9orf3-210ENST00000462125 LAMB1P07942 1786 aa16.21■□□□□ 0.18
C9orf3-210ENST00000462125 FKTNO75072 461 aa16.2■□□□□ 0.18
C9orf3-210ENST00000462125 INPP5BP32019 993 aa16.2■□□□□ 0.18
C9orf3-210ENST00000462125 PPATQ06203 517 aa16.2■□□□□ 0.18
C9orf3-210ENST00000462125 PKN2Q16513 984 aaKnown RBP16.2■□□□□ 0.18
C9orf3-210ENST00000462125 NOL9Q5SY16 702 aaKnown RBP16.2■□□□□ 0.18
C9orf3-210ENST00000462125 BRI3BPQ8WY22 251 aa16.2■□□□□ 0.18
C9orf3-210ENST00000462125 SNRKQ9NRH2 765 aa16.2■□□□□ 0.18
C9orf3-210ENST00000462125 TLR7Q9NYK1 1049 aaKnown RBP16.2■□□□□ 0.18
C9orf3-210ENST00000462125 ATRNL1Q5VV63 1379 aa16.2■□□□□ 0.18
C9orf3-210ENST00000462125 DDTLA6NHG4 134 aaPredicted RBP16.19■□□□□ 0.18
C9orf3-210ENST00000462125 CCDC85CA6NKD9 419 aa16.19■□□□□ 0.18
C9orf3-210ENST00000462125 PHF20L1A8MW92 1017 aa16.19■□□□□ 0.18
C9orf3-210ENST00000462125 IRF6O14896 467 aa16.19■□□□□ 0.18
C9orf3-210ENST00000462125 PPP4CP60510 307 aa16.19■□□□□ 0.18
C9orf3-210ENST00000462125 PPIL2Q13356 520 aa16.19■□□□□ 0.18
C9orf3-210ENST00000462125 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.19■□□□□ 0.18
C9orf3-210ENST00000462125 RHPN1Q8TCX5 695 aa16.19■□□□□ 0.18
C9orf3-210ENST00000462125 OTOFQ9HC10 1997 aa16.18■□□□□ 0.18
C9orf3-210ENST00000462125 CCL15-CCL14A0A0B4J2E2 113 aa16.18■□□□□ 0.18
C9orf3-210ENST00000462125 TBC1D12O60347 775 aa16.18■□□□□ 0.18
C9orf3-210ENST00000462125 HMMRO75330 724 aa16.18■□□□□ 0.18
C9orf3-210ENST00000462125 ZAP70P43403 619 aa16.18■□□□□ 0.18
C9orf3-210ENST00000462125 CRHR2Q13324 411 aa16.18■□□□□ 0.18
C9orf3-210ENST00000462125 CCL15Q16663 113 aa16.18■□□□□ 0.18
C9orf3-210ENST00000462125 C20orf194Q5TEA3 1177 aa16.18■□□□□ 0.18
C9orf3-210ENST00000462125 ZCCHC17Q9NP64 241 aaKnown RBP16.18■□□□□ 0.18
C9orf3-210ENST00000462125 CETPP11597 493 aa16.17■□□□□ 0.18
C9orf3-210ENST00000462125 RGS19P49795 217 aa16.17■□□□□ 0.18
C9orf3-210ENST00000462125 SNAPC2Q13487 334 aa16.17■□□□□ 0.18
C9orf3-210ENST00000462125 NAA16Q6N069 864 aaPredicted RBP16.17■□□□□ 0.18
C9orf3-210ENST00000462125 ZSCAN29Q8IWY8 852 aaPredicted RBP16.17■□□□□ 0.18
C9orf3-210ENST00000462125 FAM43AQ8N2R8 423 aa16.17■□□□□ 0.18
C9orf3-210ENST00000462125 KIF1BPQ96EK5 621 aa16.17■□□□□ 0.18
C9orf3-210ENST00000462125 KCNH4Q9UQ05 1017 aa16.17■□□□□ 0.18
C9orf3-210ENST00000462125 RAB11FIP3O75154 756 aa16.16■□□□□ 0.18
C9orf3-210ENST00000462125 BAG3O95817 575 aa16.16■□□□□ 0.18
C9orf3-210ENST00000462125 PICALMQ13492 652 aa16.16■□□□□ 0.18
C9orf3-210ENST00000462125 AACSQ86V21 672 aa16.16■□□□□ 0.18
C9orf3-210ENST00000462125 PIH1D3Q9NQM4 214 aaKnown RBP16.16■□□□□ 0.18
C9orf3-210ENST00000462125 MLLT1Q03111 559 aaPredicted RBP16.15■□□□□ 0.18
C9orf3-210ENST00000462125 TMED8Q6PL24 325 aaPredicted RBP16.15■□□□□ 0.18
C9orf3-210ENST00000462125 SCYL3Q8IZE3 742 aa16.15■□□□□ 0.18
C9orf3-210ENST00000462125 CLASRPQ8N2M8 674 aaKnown RBP16.15■□□□□ 0.18
C9orf3-210ENST00000462125 YTHDC1Q96MU7 727 aaKnown RBP16.15■□□□□ 0.18
C9orf3-210ENST00000462125 OSBPL5Q9H0X9 879 aaPredicted RBP16.15■□□□□ 0.18
C9orf3-210ENST00000462125 ZFYVE28Q9HCC9 887 aa16.15■□□□□ 0.18
C9orf3-210ENST00000462125 IL1RAPL2Q9NP60 686 aa16.15■□□□□ 0.18
C9orf3-210ENST00000462125 BTBD19C9JJ37 291 aa16.14■□□□□ 0.17
C9orf3-210ENST00000462125 CXCL11O14625 94 aa16.14■□□□□ 0.17
C9orf3-210ENST00000462125 CTNND1O60716 968 aaKnown RBP16.14■□□□□ 0.17
C9orf3-210ENST00000462125 PLCG2P16885 1265 aa16.14■□□□□ 0.17
C9orf3-210ENST00000462125 SP3Q02447 781 aa16.14■□□□□ 0.17
C9orf3-210ENST00000462125 FBXO46Q6PJ61 603 aaPredicted RBP16.14■□□□□ 0.17
C9orf3-210ENST00000462125 ADGRA1Q86SQ6 560 aa16.14■□□□□ 0.17
C9orf3-210ENST00000462125 TEX11Q8IYF3 940 aa16.14■□□□□ 0.17
C9orf3-210ENST00000462125 SH3RF3Q8TEJ3 882 aaPredicted RBP16.14■□□□□ 0.17
C9orf3-210ENST00000462125 NOL10Q9BSC4 688 aaKnown RBP16.14■□□□□ 0.17
C9orf3-210ENST00000462125 AATFQ9NY61 560 aaKnown RBP eCLIP16.14■□□□□ 0.17
C9orf3-210ENST00000462125 COL2A1P02458 1487 aaPredicted RBP16.14■□□□□ 0.17
C9orf3-210ENST00000462125 SLURP2P0DP57 97 aa16.13■□□□□ 0.17
C9orf3-210ENST00000462125 PTPRAP18433 802 aa16.13■□□□□ 0.17
C9orf3-210ENST00000462125 MOGSQ13724 837 aa16.13■□□□□ 0.17
C9orf3-210ENST00000462125 TAF1CQ15572 869 aaPredicted RBP16.13■□□□□ 0.17
C9orf3-210ENST00000462125 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.13■□□□□ 0.17
C9orf3-210ENST00000462125 ERO1AQ96HE7 468 aa16.13■□□□□ 0.17
C9orf3-210ENST00000462125 ANTXR1Q9H6X2 564 aa16.13■□□□□ 0.17
C9orf3-210ENST00000462125 PCDH10Q9P2E7 1040 aa16.13■□□□□ 0.17
C9orf3-210ENST00000462125 HPS5Q9UPZ3 1129 aa16.13■□□□□ 0.17
C9orf3-210ENST00000462125 AK9Q5TCS8 1911 aa16.13■□□□□ 0.17
C9orf3-210ENST00000462125 TLR2O60603 784 aa16.12■□□□□ 0.17
C9orf3-210ENST00000462125 ANKRD23Q86SG2 305 aa16.12■□□□□ 0.17
C9orf3-210ENST00000462125 METTL16Q86W50 562 aaKnown RBP16.12■□□□□ 0.17
C9orf3-210ENST00000462125 DHX36Q9H2U1 1008 aaKnown RBP16.12■□□□□ 0.17
C9orf3-210ENST00000462125 PI4KBQ9UBF8 816 aa16.12■□□□□ 0.17
C9orf3-210ENST00000462125 AFG3L2Q9Y4W6 797 aa16.12■□□□□ 0.17
C9orf3-210ENST00000462125 ZHX2Q9Y6X8 837 aa16.12■□□□□ 0.17
C9orf3-210ENST00000462125 IDH1O75874 414 aaKnown RBP16.11■□□□□ 0.17
C9orf3-210ENST00000462125 CYP7A1P22680 504 aa16.11■□□□□ 0.17
C9orf3-210ENST00000462125 MAP3K12Q12852 859 aa16.11■□□□□ 0.17
C9orf3-210ENST00000462125 OTOP1Q7RTM1 612 aa16.11■□□□□ 0.17
C9orf3-210ENST00000462125 TGFBRAP1Q8WUH2 860 aa16.11■□□□□ 0.17
C9orf3-210ENST00000462125 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.11■□□□□ 0.172e-7■■■□□ 18.7
C9orf3-210ENST00000462125 PICK1Q9NRD5 415 aa16.11■□□□□ 0.17
C9orf3-210ENST00000462125 TRIM17Q9Y577 477 aa16.11■□□□□ 0.17
C9orf3-210ENST00000462125 NDUFB9Q9Y6M9 179 aa16.11■□□□□ 0.17
C9orf3-210ENST00000462125 APBB1O00213 710 aa16.1■□□□□ 0.17
C9orf3-210ENST00000462125 IFIT2P09913 472 aaKnown RBP16.1■□□□□ 0.17
C9orf3-210ENST00000462125 TTF1Q15361 905 aaPredicted RBP16.1■□□□□ 0.17
C9orf3-210ENST00000462125 GPAT2Q6NUI2 795 aa16.1■□□□□ 0.17
C9orf3-210ENST00000462125 CERS3Q8IU89 383 aa16.1■□□□□ 0.17
C9orf3-210ENST00000462125 FOXP4Q8IVH2 680 aaPredicted RBP16.1■□□□□ 0.17
C9orf3-210ENST00000462125 CD99L2Q8TCZ2 262 aa16.1■□□□□ 0.17
C9orf3-210ENST00000462125 HERC5Q9UII4 1024 aaKnown RBP16.1■□□□□ 0.17
C9orf3-210ENST00000462125 A0A0G2JLL6 359 aaPredicted RBP16.09■□□□□ 0.17
C9orf3-210ENST00000462125 DYNLL1P63167 89 aaKnown RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms