RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 USP48Q86UV5 1035 aa6.88□□□□□ -1.31
CLK1-207ENST00000461981 HELBQ8NG08 1087 aaPredicted RBP6.88□□□□□ -1.31
CLK1-207ENST00000461981 KIAA1524Q8TCG1 905 aa6.88□□□□□ -1.31
CLK1-207ENST00000461981 GLIS2Q9BZE0 524 aaPredicted RBP6.88□□□□□ -1.31
CLK1-207ENST00000461981 TSPY26PQ9H489 355 aa6.88□□□□□ -1.31
CLK1-207ENST00000461981 OTOFQ9HC10 1997 aa6.88□□□□□ -1.31
CLK1-207ENST00000461981 IRS2Q9Y4H2 1338 aa6.88□□□□□ -1.31
CLK1-207ENST00000461981 USP17L8P0C7I0 530 aa6.88□□□□□ -1.31
CLK1-207ENST00000461981 PKP1Q13835 747 aa6.88□□□□□ -1.31
CLK1-207ENST00000461981 SUPT20HL1Q3ZLR7 823 aa6.88□□□□□ -1.31
CLK1-207ENST00000461981 TEX35Q5T0J7 233 aa6.88□□□□□ -1.31
CLK1-207ENST00000461981 ANKRD18AQ8IVF6 992 aa6.88□□□□□ -1.31
CLK1-207ENST00000461981 SPC24Q8NBT2 197 aa6.88□□□□□ -1.31
CLK1-207ENST00000461981 SMARCE1Q969G3 411 aa6.88□□□□□ -1.31
CLK1-207ENST00000461981 CLUAP1Q96AJ1 413 aa6.88□□□□□ -1.31
CLK1-207ENST00000461981 CWC15Q9P013 229 aaKnown RBP6.88□□□□□ -1.31
CLK1-207ENST00000461981 SLC45A1Q9Y2W3 748 aa6.88□□□□□ -1.31
CLK1-207ENST00000461981 ANKRD65E5RJM6 399 aa6.87□□□□□ -1.31
CLK1-207ENST00000461981 IRS4O14654 1257 aaPredicted RBP6.87□□□□□ -1.31
CLK1-207ENST00000461981 CAND2O75155 1236 aa6.87□□□□□ -1.31
CLK1-207ENST00000461981 CSF1RP07333 972 aa6.87□□□□□ -1.31
CLK1-207ENST00000461981 CALRP27797 417 aaKnown RBP6.87□□□□□ -1.31
CLK1-207ENST00000461981 CCT2P78371 535 aaKnown RBP6.87□□□□□ -1.31
CLK1-207ENST00000461981 ELF2Q15723 593 aa6.87□□□□□ -1.31
CLK1-207ENST00000461981 ZKSCAN8Q15776 578 aaPredicted RBP6.87□□□□□ -1.31
CLK1-207ENST00000461981 FOXD4L5Q5VV16 416 aaPredicted RBP6.87□□□□□ -1.31
CLK1-207ENST00000461981 NAIF1Q69YI7 327 aaPredicted RBP6.87□□□□□ -1.31
CLK1-207ENST00000461981 FOXD4L4Q8WXT5 416 aaPredicted RBP6.87□□□□□ -1.31
CLK1-207ENST00000461981 KIF1BPQ96EK5 621 aa6.87□□□□□ -1.31
CLK1-207ENST00000461981 CSRNP1Q96S65 589 aa6.87□□□□□ -1.31
CLK1-207ENST00000461981 HPS5Q9UPZ3 1129 aa6.87□□□□□ -1.31
CLK1-207ENST00000461981 SPEF2Q9C093 1822 aa6.87□□□□□ -1.31
CLK1-207ENST00000461981 H7C1W4 665 aa6.87□□□□□ -1.31
CLK1-207ENST00000461981 IL1R1P14778 569 aa6.87□□□□□ -1.31
CLK1-207ENST00000461981 TNFAIP1Q13829 316 aa6.87□□□□□ -1.31
CLK1-207ENST00000461981 SYCP1Q15431 976 aa6.87□□□□□ -1.31
CLK1-207ENST00000461981 ZC3H12AQ5D1E8 599 aaKnown RBP6.87□□□□□ -1.31
CLK1-207ENST00000461981 DACT2Q5SW24 774 aa6.87□□□□□ -1.31
CLK1-207ENST00000461981 MCTP2Q6DN12 878 aa6.87□□□□□ -1.31
CLK1-207ENST00000461981 FAM184AQ8NB25 1140 aa6.87□□□□□ -1.31
CLK1-207ENST00000461981 PANK1Q8TE04 598 aa6.87□□□□□ -1.31
CLK1-207ENST00000461981 CWC22Q9HCG8 908 aaKnown RBP6.87□□□□□ -1.31
CLK1-207ENST00000461981 MYOZ2Q9NPC6 264 aa6.87□□□□□ -1.31
CLK1-207ENST00000461981 IRAK4Q9NWZ3 460 aa6.87□□□□□ -1.31
CLK1-207ENST00000461981 MAST3O60307 1309 aa6.87□□□□□ -1.31
CLK1-207ENST00000461981 SMTNL1A8MU46 457 aa6.87□□□□□ -1.31
CLK1-207ENST00000461981 GPR25O00155 361 aa6.87□□□□□ -1.31
CLK1-207ENST00000461981 WDHD1O75717 1129 aaPredicted RBP6.87□□□□□ -1.31
CLK1-207ENST00000461981 ZNF157P51786 506 aaPredicted RBP6.87□□□□□ -1.31
CLK1-207ENST00000461981 NUTM1Q86Y26 1132 aa6.87□□□□□ -1.31
CLK1-207ENST00000461981 ITFG2Q969R8 447 aa6.87□□□□□ -1.31
CLK1-207ENST00000461981 ZBTB3Q9H5J0 574 aa6.87□□□□□ -1.31
CLK1-207ENST00000461981 EXOC6BQ9Y2D4 811 aa6.87□□□□□ -1.31
CLK1-207ENST00000461981 PDS5AQ29RF7 1337 aaKnown RBP6.87□□□□□ -1.31
CLK1-207ENST00000461981 AOC2O75106 756 aa6.86□□□□□ -1.31
CLK1-207ENST00000461981 HDGFL1Q5TGJ6 251 aa6.86□□□□□ -1.31
CLK1-207ENST00000461981 SPRYD7Q5W111 196 aa6.86□□□□□ -1.31
CLK1-207ENST00000461981 KSR2Q6VAB6 950 aa6.86□□□□□ -1.31
CLK1-207ENST00000461981 NKX2-3Q8TAU0 364 aa6.86□□□□□ -1.31
CLK1-207ENST00000461981 KCNF1Q9H3M0 494 aa6.86□□□□□ -1.31
CLK1-207ENST00000461981 POLLQ9UGP5 575 aa6.86□□□□□ -1.31
CLK1-207ENST00000461981 RRP7AQ9Y3A4 280 aaKnown RBP6.86□□□□□ -1.31
CLK1-207ENST00000461981 KLHL33A6NCF5 533 aa6.86□□□□□ -1.31
CLK1-207ENST00000461981 CCDC85CA6NKD9 419 aa6.86□□□□□ -1.31
CLK1-207ENST00000461981 K7ELQ4 463 aaPredicted RBP6.86□□□□□ -1.31
CLK1-207ENST00000461981 NEBLO76041 1014 aa6.86□□□□□ -1.31
CLK1-207ENST00000461981 CTSWP56202 376 aa6.86□□□□□ -1.31
CLK1-207ENST00000461981 DUSP27Q5VZP5 1158 aa6.86□□□□□ -1.31
CLK1-207ENST00000461981 C3orf67Q6ZVT6 689 aa6.86□□□□□ -1.31
CLK1-207ENST00000461981 ARMCX6Q7L4S7 300 aa6.86□□□□□ -1.31
CLK1-207ENST00000461981 SNX21Q969T3 373 aa6.86□□□□□ -1.31
CLK1-207ENST00000461981 ZNF428Q96B54 188 aa6.86□□□□□ -1.31
CLK1-207ENST00000461981 FAM53CQ9NYF3 392 aa6.86□□□□□ -1.31
CLK1-207ENST00000461981 TRIM35Q9UPQ4 493 aa6.86□□□□□ -1.31
CLK1-207ENST00000461981 DNAJC14Q6Y2X3 702 aaPredicted RBP6.85□□□□□ -1.31
CLK1-207ENST00000461981 GINM1Q9NU53 330 aa6.85□□□□□ -1.31
CLK1-207ENST00000461981 ZNF219Q9P2Y4 722 aaPredicted RBP6.85□□□□□ -1.31
CLK1-207ENST00000461981 ZNF215Q9UL58 517 aaPredicted RBP6.85□□□□□ -1.31
CLK1-207ENST00000461981 CASP8AP2Q9UKL3 1982 aa6.85□□□□□ -1.31
CLK1-207ENST00000461981 TRAF5O00463 557 aa6.85□□□□□ -1.31
CLK1-207ENST00000461981 HMGB1P09429 215 aaKnown RBP6.85□□□□□ -1.31
CLK1-207ENST00000461981 NEXNQ0ZGT2 675 aa6.85□□□□□ -1.31
CLK1-207ENST00000461981 SCARF1Q14162 830 aa6.85□□□□□ -1.31
CLK1-207ENST00000461981 ZNF330Q9Y3S2 320 aaPredicted RBP6.85□□□□□ -1.31
CLK1-207ENST00000461981 RPS6KL1Q9Y6S9 549 aa6.85□□□□□ -1.31
CLK1-207ENST00000461981 NPM3O75607 178 aaKnown RBP6.85□□□□□ -1.31
CLK1-207ENST00000461981 ALDH1L1O75891 902 aa6.85□□□□□ -1.31
CLK1-207ENST00000461981 MAGEA9P43362 315 aa6.85□□□□□ -1.31
CLK1-207ENST00000461981 IREB2P48200 963 aaKnown RBP6.85□□□□□ -1.31
CLK1-207ENST00000461981 NOL9Q5SY16 702 aaKnown RBP6.85□□□□□ -1.31
CLK1-207ENST00000461981 WNK4Q96J92 1243 aa6.85□□□□□ -1.31
CLK1-207ENST00000461981 GGA3Q9NZ52 723 aa6.85□□□□□ -1.31
CLK1-207ENST00000461981 SERPINA10Q9UK55 444 aa6.85□□□□□ -1.31
CLK1-207ENST00000461981 UTYO14607 1347 aa6.84□□□□□ -1.31
CLK1-207ENST00000461981 RAD50Q92878 1312 aa6.84□□□□□ -1.31
CLK1-207ENST00000461981 ECM2O94769 699 aaPredicted RBP6.84□□□□□ -1.31
CLK1-207ENST00000461981 GPTP24298 496 aa6.84□□□□□ -1.31
CLK1-207ENST00000461981 MNAT1P51948 309 aa6.84□□□□□ -1.31
CLK1-207ENST00000461981 GPS2Q13227 327 aa6.84□□□□□ -1.31
CLK1-207ENST00000461981 TMEM132AQ24JP5 1023 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms