RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 ZCCHC17Q9NP64 241 aaKnown RBP10.85□□□□□ -0.67
LDB1-203ENST00000461873 HMG20BQ9P0W2 317 aa10.85□□□□□ -0.67
LDB1-203ENST00000461873 FPGT-TNNI3KV9GXZ4 949 aa10.85□□□□□ -0.67
LDB1-203ENST00000461873 IRF6O14896 467 aa10.84□□□□□ -0.67
LDB1-203ENST00000461873 ARID4AP29374 1257 aaPredicted RBP10.84□□□□□ -0.67
LDB1-203ENST00000461873 GJA5P36382 358 aa10.84□□□□□ -0.67
LDB1-203ENST00000461873 NFIAQ12857 509 aa10.84□□□□□ -0.67
LDB1-203ENST00000461873 TEX11Q8IYF3 940 aa10.84□□□□□ -0.67
LDB1-203ENST00000461873 CD99L2Q8TCZ2 262 aa10.84□□□□□ -0.67
LDB1-203ENST00000461873 SSH3Q8TE77 659 aa10.84□□□□□ -0.67
LDB1-203ENST00000461873 FAM163AQ96GL9 167 aaPredicted RBP10.84□□□□□ -0.67
LDB1-203ENST00000461873 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.84□□□□□ -0.67
LDB1-203ENST00000461873 DDX19BQ9UMR2 479 aa10.84□□□□□ -0.67
LDB1-203ENST00000461873 SNCAIPQ9Y6H5 919 aa10.84□□□□□ -0.67
LDB1-203ENST00000461873 GAKO14976 1311 aa10.84□□□□□ -0.67
LDB1-203ENST00000461873 OTOFQ9HC10 1997 aa10.83□□□□□ -0.68
LDB1-203ENST00000461873 GPR75-ASB3A0A0A6YYF3 556 aa10.83□□□□□ -0.68
LDB1-203ENST00000461873 ZBTB7BO15156 539 aaPredicted RBP10.83□□□□□ -0.68
LDB1-203ENST00000461873 IGSF3O75054 1194 aa10.83□□□□□ -0.68
LDB1-203ENST00000461873 HOXD10P28358 340 aa10.83□□□□□ -0.68
LDB1-203ENST00000461873 INPP5BP32019 993 aa10.83□□□□□ -0.68
LDB1-203ENST00000461873 POLA2Q14181 598 aa10.83□□□□□ -0.68
LDB1-203ENST00000461873 TBC1D9Q6ZT07 1266 aa10.83□□□□□ -0.68
LDB1-203ENST00000461873 FASTKD5Q7L8L6 764 aaKnown RBP10.83□□□□□ -0.68
LDB1-203ENST00000461873 SCYL3Q8IZE3 742 aa10.83□□□□□ -0.68
LDB1-203ENST00000461873 CLASRPQ8N2M8 674 aaKnown RBP10.83□□□□□ -0.68
LDB1-203ENST00000461873 BRI3BPQ8WY22 251 aa10.83□□□□□ -0.68
LDB1-203ENST00000461873 MS4A4AQ96JQ5 239 aa10.83□□□□□ -0.68
LDB1-203ENST00000461873 TMEM106CQ9BVX2 250 aa10.83□□□□□ -0.68
LDB1-203ENST00000461873 SNRKQ9NRH2 765 aa10.83□□□□□ -0.68
LDB1-203ENST00000461873 FAM198AQ9UFP1 575 aa10.83□□□□□ -0.68
LDB1-203ENST00000461873 IFIT2P09913 472 aaKnown RBP10.82□□□□□ -0.68
LDB1-203ENST00000461873 MCAMP43121 646 aa10.82□□□□□ -0.68
LDB1-203ENST00000461873 RGS19P49795 217 aa10.82□□□□□ -0.68
LDB1-203ENST00000461873 GADL1Q6ZQY3 521 aa10.82□□□□□ -0.68
LDB1-203ENST00000461873 OTOP1Q7RTM1 612 aa10.82□□□□□ -0.68
LDB1-203ENST00000461873 AACSQ86V21 672 aa10.82□□□□□ -0.68
LDB1-203ENST00000461873 CERS3Q8IU89 383 aa10.82□□□□□ -0.68
LDB1-203ENST00000461873 CRACR2BQ8N4Y2 399 aaPredicted RBP10.82□□□□□ -0.68
LDB1-203ENST00000461873 PANK1Q8TE04 598 aa10.82□□□□□ -0.68
LDB1-203ENST00000461873 NSUN4Q96CB9 384 aaKnown RBP10.82□□□□□ -0.68
LDB1-203ENST00000461873 PARK7Q99497 189 aaKnown RBP10.82□□□□□ -0.68
LDB1-203ENST00000461873 PTPN18Q99952 460 aa10.82□□□□□ -0.68
LDB1-203ENST00000461873 DBNDD2Q9BQY9 259 aa10.82□□□□□ -0.68
LDB1-203ENST00000461873 CCDC8Q9H0W5 538 aaPredicted RBP10.82□□□□□ -0.68
LDB1-203ENST00000461873 R3HDMLQ9H3Y0 253 aa10.82□□□□□ -0.68
LDB1-203ENST00000461873 RCAN3Q9UKA8 241 aa10.82□□□□□ -0.68
LDB1-203ENST00000461873 ZHX2Q9Y6X8 837 aa10.82□□□□□ -0.68
LDB1-203ENST00000461873 BTBD19C9JJ37 291 aa10.81□□□□□ -0.68
LDB1-203ENST00000461873 APBB1O00213 710 aa10.81□□□□□ -0.68
LDB1-203ENST00000461873 PDHXO00330 501 aa10.81□□□□□ -0.68
LDB1-203ENST00000461873 CXCL11O14625 94 aa10.81□□□□□ -0.68
LDB1-203ENST00000461873 TLR2O60603 784 aa10.81□□□□□ -0.68
LDB1-203ENST00000461873 CTNND1O60716 968 aaKnown RBP10.81□□□□□ -0.68
LDB1-203ENST00000461873 IDH1O75874 414 aaKnown RBP10.81□□□□□ -0.68
LDB1-203ENST00000461873 FMNL1O95466 1100 aaPredicted RBP10.81□□□□□ -0.68
LDB1-203ENST00000461873 GNRH1P01148 92 aa10.81□□□□□ -0.68
LDB1-203ENST00000461873 HLA-DOAP06340 250 aa10.81□□□□□ -0.68
LDB1-203ENST00000461873 MAP3K12Q12852 859 aa10.81□□□□□ -0.68
LDB1-203ENST00000461873 SLC9C1Q4G0N8 1177 aa10.81□□□□□ -0.68
LDB1-203ENST00000461873 NOL9Q5SY16 702 aaKnown RBP10.81□□□□□ -0.68
LDB1-203ENST00000461873 CEP85Q6P2H3 762 aa10.81□□□□□ -0.68
LDB1-203ENST00000461873 ANKRD23Q86SG2 305 aa10.81□□□□□ -0.68
LDB1-203ENST00000461873 RPAP2Q8IXW5 612 aaPredicted RBP10.81□□□□□ -0.68
LDB1-203ENST00000461873 FAM43AQ8N2R8 423 aa10.81□□□□□ -0.68
LDB1-203ENST00000461873 SMCR8Q8TEV9 937 aaPredicted RBP10.81□□□□□ -0.68
LDB1-203ENST00000461873 DHX36Q9H2U1 1008 aaKnown RBP10.81□□□□□ -0.68
LDB1-203ENST00000461873 AS3MTQ9HBK9 375 aa10.81□□□□□ -0.68
LDB1-203ENST00000461873 AATFQ9NY61 560 aaKnown RBP eCLIP10.81□□□□□ -0.68
LDB1-203ENST00000461873 ZNF112Q9UJU3 913 aa10.81□□□□□ -0.68
LDB1-203ENST00000461873 PTPN22Q9Y2R2 807 aa10.81□□□□□ -0.68
LDB1-203ENST00000461873 NOP58Q9Y2X3 529 aaKnown RBP10.81□□□□□ -0.68
LDB1-203ENST00000461873 DOCK2Q92608 1830 aa10.81□□□□□ -0.68
LDB1-203ENST00000461873 ECM2O94769 699 aaPredicted RBP10.8□□□□□ -0.68
LDB1-203ENST00000461873 RLBP1P12271 317 aa10.8□□□□□ -0.68
LDB1-203ENST00000461873 USP5P45974 858 aa10.8□□□□□ -0.68
LDB1-203ENST00000461873 PRMT2P55345 433 aa10.8□□□□□ -0.68
LDB1-203ENST00000461873 PABPC4Q13310 644 aaKnown RBP eCLIP10.8□□□□□ -0.68
LDB1-203ENST00000461873 TTF1Q15361 905 aaPredicted RBP10.8□□□□□ -0.68
LDB1-203ENST00000461873 SLC4A8Q2Y0W8 1093 aa10.8□□□□□ -0.68
LDB1-203ENST00000461873 PI16Q6UXB8 463 aa10.8□□□□□ -0.68
LDB1-203ENST00000461873 ZFPM1Q8IX07 1006 aa10.8□□□□□ -0.68
LDB1-203ENST00000461873 KIF1BPQ96EK5 621 aa10.8□□□□□ -0.68
LDB1-203ENST00000461873 ZNF512BQ96KM6 892 aaPredicted RBP10.8□□□□□ -0.68
LDB1-203ENST00000461873 TBC1D2Q9BYX2 928 aa10.8□□□□□ -0.68
LDB1-203ENST00000461873 OSBPL5Q9H0X9 879 aaPredicted RBP10.8□□□□□ -0.68
LDB1-203ENST00000461873 PI4KBQ9UBF8 816 aa10.8□□□□□ -0.68
LDB1-203ENST00000461873 PNMA3Q9UL41 463 aa10.8□□□□□ -0.68
LDB1-203ENST00000461873 EXOC6BQ9Y2D4 811 aa10.8□□□□□ -0.68
LDB1-203ENST00000461873 COG6Q9Y2V7 657 aa10.8□□□□□ -0.68
LDB1-203ENST00000461873 DDTLA6NHG4 134 aaPredicted RBP10.79□□□□□ -0.68
LDB1-203ENST00000461873 TRIM75PA6NK02 468 aa10.79□□□□□ -0.68
LDB1-203ENST00000461873 TBC1D12O60347 775 aa10.79□□□□□ -0.68
LDB1-203ENST00000461873 PTPRAP18433 802 aa10.79□□□□□ -0.68
LDB1-203ENST00000461873 CYP7A1P22680 504 aa10.79□□□□□ -0.68
LDB1-203ENST00000461873 ZAP70P43403 619 aa10.79□□□□□ -0.68
LDB1-203ENST00000461873 TMED8Q6PL24 325 aaPredicted RBP10.79□□□□□ -0.68
LDB1-203ENST00000461873 RAET1EQ8TD07 263 aa10.79□□□□□ -0.68
LDB1-203ENST00000461873 TGFBRAP1Q8WUH2 860 aa10.79□□□□□ -0.68
LDB1-203ENST00000461873 BIN2Q9UBW5 565 aaPredicted RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms