RNA–Protein interactions for RNA: ENST00000461862.5

SCNM1-204, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 1,094 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-204ENST00000461862 BICC1Q9H694 974 aaKnown RBP12.68□□□□□ -0.38
SCNM1-204ENST00000461862 CEP126Q9P2H0 1117 aa12.68□□□□□ -0.38
SCNM1-204ENST00000461862 MYH3P11055 1940 aa12.67□□□□□ -0.38
SCNM1-204ENST00000461862 H7C1W4 665 aa12.67□□□□□ -0.38
SCNM1-204ENST00000461862 EIF5BO60841 1220 aaKnown RBP12.67□□□□□ -0.38
SCNM1-204ENST00000461862 SURF6O75683 361 aaKnown RBP12.67□□□□□ -0.38
SCNM1-204ENST00000461862 CASP7P55210 303 aa12.67□□□□□ -0.38
SCNM1-204ENST00000461862 PRICKLE2Q7Z3G6 844 aa12.67□□□□□ -0.38
SCNM1-204ENST00000461862 VWA5B2Q8N398 1253 aa12.67□□□□□ -0.38
SCNM1-204ENST00000461862 KIF1BPQ96EK5 621 aa12.67□□□□□ -0.38
SCNM1-204ENST00000461862 CNTNAP3BQ96NU0 1288 aa12.67□□□□□ -0.38
SCNM1-204ENST00000461862 CCDC85AQ96PX6 553 aaPredicted RBP12.67□□□□□ -0.38
SCNM1-204ENST00000461862 COL25A1Q9BXS0 654 aaPredicted RBP12.67□□□□□ -0.38
SCNM1-204ENST00000461862 CNTNAP3Q9BZ76 1288 aa12.67□□□□□ -0.38
SCNM1-204ENST00000461862 TFCP2L1Q9NZI6 479 aa12.67□□□□□ -0.38
SCNM1-204ENST00000461862 SCN7AQ01118 1682 aa12.67□□□□□ -0.38
SCNM1-204ENST00000461862 AOX1Q06278 1338 aa12.66□□□□□ -0.38
SCNM1-204ENST00000461862 CNTNAP4Q9C0A0 1308 aa12.66□□□□□ -0.38
SCNM1-204ENST00000461862 RHOQP17081 205 aa12.66□□□□□ -0.38
SCNM1-204ENST00000461862 ANP32AP39687 249 aaKnown RBP12.66□□□□□ -0.38
SCNM1-204ENST00000461862 CRKLP46109 303 aaKnown RBP12.66□□□□□ -0.38
SCNM1-204ENST00000461862 EIF5P55010 431 aaKnown RBP12.66□□□□□ -0.38
SCNM1-204ENST00000461862 UBE3BQ7Z3V4 1068 aa12.66□□□□□ -0.38
SCNM1-204ENST00000461862 CUEDC1Q9NWM3 386 aaPredicted RBP12.66□□□□□ -0.38
SCNM1-204ENST00000461862 UBR3Q6ZT12 1888 aa12.65□□□□□ -0.38
SCNM1-204ENST00000461862 SALL3Q9BXA9 1300 aa12.65□□□□□ -0.38
SCNM1-204ENST00000461862 CDC14CA4D256 554 aa12.65□□□□□ -0.38
SCNM1-204ENST00000461862 SMARCA5O60264 1052 aaPredicted RBP12.65□□□□□ -0.38
SCNM1-204ENST00000461862 GPC1P35052 558 aa12.65□□□□□ -0.38
SCNM1-204ENST00000461862 TTC22Q5TAA0 569 aa12.65□□□□□ -0.38
SCNM1-204ENST00000461862 CYP2U1Q7Z449 544 aa12.65□□□□□ -0.38
SCNM1-204ENST00000461862 SRP68Q9UHB9 627 aaKnown RBP12.65□□□□□ -0.38
SCNM1-204ENST00000461862 LAMB2P55268 1798 aa12.65□□□□□ -0.38
SCNM1-204ENST00000461862 PCCAP05165 728 aaPredicted RBP12.64□□□□□ -0.39
SCNM1-204ENST00000461862 OS9Q13438 667 aaPredicted RBP12.64□□□□□ -0.39
SCNM1-204ENST00000461862 RHPN1Q8TCX5 695 aa12.64□□□□□ -0.39
SCNM1-204ENST00000461862 UPF2Q9HAU5 1272 aaKnown RBP12.64□□□□□ -0.39
SCNM1-204ENST00000461862 ARHGEF10LQ9HCE6 1279 aa12.64□□□□□ -0.39
SCNM1-204ENST00000461862 STAP2Q9UGK3 403 aa12.64□□□□□ -0.39
SCNM1-204ENST00000461862 CDHR2Q9BYE9 1310 aa12.63□□□□□ -0.39
SCNM1-204ENST00000461862 AK9Q5TCS8 1911 aa12.63□□□□□ -0.39
SCNM1-204ENST00000461862 PDE1AP54750 535 aa12.63□□□□□ -0.39
SCNM1-204ENST00000461862 CLN3Q13286 438 aa12.63□□□□□ -0.39
SCNM1-204ENST00000461862 PLA2G12BQ9BX93 195 aa12.63□□□□□ -0.39
SCNM1-204ENST00000461862 GDPD2Q9HCC8 539 aa12.63□□□□□ -0.39
SCNM1-204ENST00000461862 COPRSQ9NQ92 184 aa12.63□□□□□ -0.39
SCNM1-204ENST00000461862 MX1P20591 662 aa12.62□□□□□ -0.39
SCNM1-204ENST00000461862 G3BP1Q13283 466 aaKnown RBP eCLIP12.62□□□□□ -0.39
SCNM1-204ENST00000461862 EPHA10Q5JZY3 1008 aa12.62□□□□□ -0.39
SCNM1-204ENST00000461862 SV2AQ7L0J3 742 aa12.62□□□□□ -0.39
SCNM1-204ENST00000461862 NLRP10Q86W26 655 aa12.62□□□□□ -0.39
SCNM1-204ENST00000461862 C16orf71Q8IYS4 520 aaPredicted RBP12.62□□□□□ -0.39
SCNM1-204ENST00000461862 ZBTB38Q8NAP3 1195 aaPredicted RBP12.62□□□□□ -0.39
SCNM1-204ENST00000461862 RAB6BQ9NRW1 208 aa12.62□□□□□ -0.39
SCNM1-204ENST00000461862 USP42Q9H9J4 1324 aaKnown RBP12.62□□□□□ -0.39
SCNM1-204ENST00000461862 CDC45O75419 566 aa12.61□□□□□ -0.39
SCNM1-204ENST00000461862 GSPT1P15170 499 aaKnown RBP12.61□□□□□ -0.39
SCNM1-204ENST00000461862 HMGB2P26583 209 aaKnown RBP12.61□□□□□ -0.39
SCNM1-204ENST00000461862 RFX5P48382 616 aaPredicted RBP12.61□□□□□ -0.39
SCNM1-204ENST00000461862 FOXO4P98177 505 aa12.61□□□□□ -0.39
SCNM1-204ENST00000461862 MCM6Q14566 821 aa12.61□□□□□ -0.39
SCNM1-204ENST00000461862 TSGA10IPQ3SY00 556 aa12.61□□□□□ -0.39
SCNM1-204ENST00000461862 PARP10Q53GL7 1025 aa12.61□□□□□ -0.39
SCNM1-204ENST00000461862 CLASRPQ8N2M8 674 aaKnown RBP12.61□□□□□ -0.39
SCNM1-204ENST00000461862 PHTF2Q8N3S3 785 aa12.61□□□□□ -0.39
SCNM1-204ENST00000461862 OTUD7AQ8TE49 926 aaPredicted RBP12.61□□□□□ -0.39
SCNM1-204ENST00000461862 ZNF652Q9Y2D9 606 aa12.61□□□□□ -0.39
SCNM1-204ENST00000461862 C4AP0C0L4 1744 aa12.6□□□□□ -0.39
SCNM1-204ENST00000461862 QSER1Q2KHR3 1735 aa12.6□□□□□ -0.39
SCNM1-204ENST00000461862 RPS6KA4O75676 772 aa12.6□□□□□ -0.39
SCNM1-204ENST00000461862 CAMTA2O94983 1202 aa12.6□□□□□ -0.39
SCNM1-204ENST00000461862 VAC14Q08AM6 782 aa12.6□□□□□ -0.39
SCNM1-204ENST00000461862 HLFQ16534 295 aa12.6□□□□□ -0.39
SCNM1-204ENST00000461862 LMBR1LQ6UX01 489 aa12.6□□□□□ -0.39
SCNM1-204ENST00000461862 ZNF34Q8IZ26 560 aa12.6□□□□□ -0.39
SCNM1-204ENST00000461862 GPATCH3Q96I76 525 aa12.6□□□□□ -0.39
SCNM1-204ENST00000461862 ARXQ96QS3 562 aa12.6□□□□□ -0.39
SCNM1-204ENST00000461862 GRIP2Q9C0E4 1043 aa12.6□□□□□ -0.39
SCNM1-204ENST00000461862 PA2G4Q9UQ80 394 aaKnown RBP12.6□□□□□ -0.39
SCNM1-204ENST00000461862 TTC41PQ6P2S7 1318 aa12.6□□□□□ -0.39
SCNM1-204ENST00000461862 COL24A1Q17RW2 1714 aa12.59□□□□□ -0.39
SCNM1-204ENST00000461862 HSP90B1P14625 803 aaKnown RBP12.59□□□□□ -0.39
SCNM1-204ENST00000461862 PTPN12Q05209 780 aaKnown RBP12.59□□□□□ -0.39
SCNM1-204ENST00000461862 CASC1Q6TDU7 716 aa12.59□□□□□ -0.39
SCNM1-204ENST00000461862 CLEC4GQ6UXB4 293 aa12.59□□□□□ -0.39
SCNM1-204ENST00000461862 NLRP3Q96P20 1036 aa12.59□□□□□ -0.39
SCNM1-204ENST00000461862 PRM3Q9NNZ6 103 aa12.59□□□□□ -0.39
SCNM1-204ENST00000461862 IL1RAPL2Q9NP60 686 aa12.59□□□□□ -0.39
SCNM1-204ENST00000461862 DDX60Q8IY21 1712 aaKnown RBP12.59□□□□□ -0.39
SCNM1-204ENST00000461862 IL2RAP01589 272 aa12.58□□□□□ -0.4
SCNM1-204ENST00000461862 POU4F2Q12837 409 aa12.58□□□□□ -0.4
SCNM1-204ENST00000461862 JARID2Q92833 1246 aaPredicted RBP12.58□□□□□ -0.4
SCNM1-204ENST00000461862 RTCBQ9Y3I0 505 aaKnown RBP12.58□□□□□ -0.4
SCNM1-204ENST00000461862 LRP5O75197 1615 aa12.58□□□□□ -0.4
SCNM1-204ENST00000461862 ERC2O15083 957 aa12.57□□□□□ -0.4
SCNM1-204ENST00000461862 CIAO1O76071 339 aa12.57□□□□□ -0.4
SCNM1-204ENST00000461862 SASH1O94885 1247 aa12.57□□□□□ -0.4
SCNM1-204ENST00000461862 CSF1RP07333 972 aa12.57□□□□□ -0.4
SCNM1-204ENST00000461862 IFIT2P09913 472 aaKnown RBP12.57□□□□□ -0.4
SCNM1-204ENST00000461862 GYS1P13807 737 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms