RNA–Protein interactions for RNA: ENST00000461624.1

SPTA1-202, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 2

Gene SPTA1, Length 930 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-202ENST00000461624 PLVAPQ9BX97 442 aa7.69□□□□□ -1.18
SPTA1-202ENST00000461624 PPP1R12CQ9BZL4 782 aa7.69□□□□□ -1.18
SPTA1-202ENST00000461624 RNF181Q9P0P0 153 aa7.69□□□□□ -1.18
SPTA1-202ENST00000461624 RBM19Q9Y4C8 960 aaKnown RBP7.69□□□□□ -1.18
SPTA1-202ENST00000461624 THSD7BQ9C0I4 1608 aa7.68□□□□□ -1.18
SPTA1-202ENST00000461624 SPEM2Q0P670 501 aa7.68□□□□□ -1.18
SPTA1-202ENST00000461624 SFSWAPQ12872 951 aaKnown RBP7.68□□□□□ -1.18
SPTA1-202ENST00000461624 STAG2Q8N3U4 1231 aa7.68□□□□□ -1.18
SPTA1-202ENST00000461624 PHACTR1Q9C0D0 580 aa7.68□□□□□ -1.18
SPTA1-202ENST00000461624 PRDM6Q9NQX0 595 aa7.68□□□□□ -1.18
SPTA1-202ENST00000461624 TFIP11Q9UBB9 837 aaKnown RBP7.68□□□□□ -1.18
SPTA1-202ENST00000461624 CENPJQ9HC77 1338 aaPredicted RBP7.68□□□□□ -1.18
SPTA1-202ENST00000461624 HSPA8P11142 646 aaKnown RBP7.67□□□□□ -1.18
SPTA1-202ENST00000461624 VEGFAP15692 232 aaPredicted RBP7.67□□□□□ -1.18
SPTA1-202ENST00000461624 LBX1P52954 281 aa7.67□□□□□ -1.18
SPTA1-202ENST00000461624 HIF1AQ16665 826 aa7.67□□□□□ -1.18
SPTA1-202ENST00000461624 LINC00116Q8NCU8 138 aa7.67□□□□□ -1.18
SPTA1-202ENST00000461624 SLC30A3Q99726 388 aa7.67□□□□□ -1.18
SPTA1-202ENST00000461624 BRD7Q9NPI1 651 aa7.67□□□□□ -1.18
SPTA1-202ENST00000461624 SBNO2Q9Y2G9 1366 aa7.67□□□□□ -1.18
SPTA1-202ENST00000461624 CD163L1Q9NR16 1453 aa7.67□□□□□ -1.18
SPTA1-202ENST00000461624 CCDC88AQ3V6T2 1871 aa7.66□□□□□ -1.18
SPTA1-202ENST00000461624 MKI67P46013 3256 aaKnown RBP7.66□□□□□ -1.18
SPTA1-202ENST00000461624 GLTPD2A6NH11 291 aa7.66□□□□□ -1.18
SPTA1-202ENST00000461624 HMGB2P26583 209 aaKnown RBP7.66□□□□□ -1.18
SPTA1-202ENST00000461624 TYRO3Q06418 890 aa7.66□□□□□ -1.18
SPTA1-202ENST00000461624 PRRT3Q5FWE3 981 aa7.66□□□□□ -1.18
SPTA1-202ENST00000461624 TSEN2Q8NCE0 465 aaKnown RBP7.66□□□□□ -1.18
SPTA1-202ENST00000461624 GAS2L2Q8NHY3 880 aa7.66□□□□□ -1.18
SPTA1-202ENST00000461624 ZCRB1Q8TBF4 217 aaKnown RBP7.66□□□□□ -1.18
SPTA1-202ENST00000461624 HSH2DQ96JZ2 352 aa7.66□□□□□ -1.18
SPTA1-202ENST00000461624 CEP63Q96MT8 703 aa7.66□□□□□ -1.18
SPTA1-202ENST00000461624 MAFBQ9Y5Q3 323 aaPredicted RBP7.66□□□□□ -1.18
SPTA1-202ENST00000461624 PPP1R12BO60237 982 aaPredicted RBP7.65□□□□□ -1.18
SPTA1-202ENST00000461624 DKK1O94907 266 aa7.65□□□□□ -1.18
SPTA1-202ENST00000461624 LMOD1P29536 600 aaPredicted RBP7.65□□□□□ -1.18
SPTA1-202ENST00000461624 ADH7P40394 386 aa7.65□□□□□ -1.18
SPTA1-202ENST00000461624 XP32Q5T750 250 aa7.65□□□□□ -1.18
SPTA1-202ENST00000461624 KTN1Q86UP2 1357 aaKnown RBP7.65□□□□□ -1.18
SPTA1-202ENST00000461624 IP6K1Q92551 441 aa7.65□□□□□ -1.18
SPTA1-202ENST00000461624 ZNF594Q96JF6 807 aaPredicted RBP7.65□□□□□ -1.18
SPTA1-202ENST00000461624 SUSD3Q96L08 255 aa7.65□□□□□ -1.18
SPTA1-202ENST00000461624 PASKQ96RG2 1323 aa7.65□□□□□ -1.18
SPTA1-202ENST00000461624 KCNH4Q9UQ05 1017 aa7.65□□□□□ -1.18
SPTA1-202ENST00000461624 DLEC1Q9Y238 1755 aa7.65□□□□□ -1.18
SPTA1-202ENST00000461624 HCN4Q9Y3Q4 1203 aa7.65□□□□□ -1.18
SPTA1-202ENST00000461624 SZT2Q5T011 3432 aa7.65□□□□□ -1.19
SPTA1-202ENST00000461624 DICER1Q9UPY3 1922 aaKnown RBP7.64□□□□□ -1.19
SPTA1-202ENST00000461624 COL5A3P25940 1745 aaPredicted RBP7.64□□□□□ -1.19
SPTA1-202ENST00000461624 ZNF831Q5JPB2 1677 aa7.64□□□□□ -1.19
SPTA1-202ENST00000461624 M0R082 166 aa7.64□□□□□ -1.19
SPTA1-202ENST00000461624 C21orf2O43822 256 aa7.64□□□□□ -1.19
SPTA1-202ENST00000461624 GATA4P43694 442 aa7.64□□□□□ -1.19
SPTA1-202ENST00000461624 ITPK1Q13572 414 aa7.64□□□□□ -1.19
SPTA1-202ENST00000461624 NME9Q86XW9 330 aa7.64□□□□□ -1.19
SPTA1-202ENST00000461624 ZNF417Q8TAU3 575 aa7.64□□□□□ -1.19
SPTA1-202ENST00000461624 ZNF587Q96SQ5 575 aaPredicted RBP7.64□□□□□ -1.19
SPTA1-202ENST00000461624 EFCC1Q9HA90 598 aa7.64□□□□□ -1.19
SPTA1-202ENST00000461624 MYH14Q7Z406 1995 aaKnown RBP7.64□□□□□ -1.19
SPTA1-202ENST00000461624 LTBP1Q14766 1721 aa7.64□□□□□ -1.19
SPTA1-202ENST00000461624 SFI1A8K8P3 1242 aa7.63□□□□□ -1.19
SPTA1-202ENST00000461624 SEC13P55735 322 aa7.63□□□□□ -1.19
SPTA1-202ENST00000461624 DALRD3Q5D0E6 543 aaKnown RBP7.63□□□□□ -1.19
SPTA1-202ENST00000461624 ALDH16A1Q8IZ83 802 aa7.63□□□□□ -1.19
SPTA1-202ENST00000461624 CCDC82Q8N4S0 544 aa7.63□□□□□ -1.19
SPTA1-202ENST00000461624 C2orf49Q9BVC5 232 aaPredicted RBP7.63□□□□□ -1.19
SPTA1-202ENST00000461624 PIM2Q9P1W9 311 aa7.63□□□□□ -1.19
SPTA1-202ENST00000461624 STARD13Q9Y3M8 1113 aa7.63□□□□□ -1.19
SPTA1-202ENST00000461624 KDRP35968 1356 aa7.62□□□□□ -1.19
SPTA1-202ENST00000461624 ADAMTSL1Q8N6G6 1762 aa7.62□□□□□ -1.19
SPTA1-202ENST00000461624 CGNL1Q0VF96 1302 aa7.62□□□□□ -1.19
SPTA1-202ENST00000461624 LOC102724428A0A0B4J2F2 783 aa7.62□□□□□ -1.19
SPTA1-202ENST00000461624 CCDC85CA6NKD9 419 aa7.62□□□□□ -1.19
SPTA1-202ENST00000461624 ALBP02768 609 aa7.62□□□□□ -1.19
SPTA1-202ENST00000461624 GYS1P13807 737 aa7.62□□□□□ -1.19
SPTA1-202ENST00000461624 RASA1P20936 1047 aa7.62□□□□□ -1.19
SPTA1-202ENST00000461624 SIK1P57059 783 aa7.62□□□□□ -1.19
SPTA1-202ENST00000461624 COL9A3Q14050 684 aaPredicted RBP7.62□□□□□ -1.19
SPTA1-202ENST00000461624 IER5Q5VY09 327 aa7.62□□□□□ -1.19
SPTA1-202ENST00000461624 MICALL1Q8N3F8 863 aa7.62□□□□□ -1.19
SPTA1-202ENST00000461624 ZNF280CQ8ND82 737 aa7.62□□□□□ -1.19
SPTA1-202ENST00000461624 SMARCC1Q92922 1105 aaPredicted RBP7.62□□□□□ -1.19
SPTA1-202ENST00000461624 NACC1Q96RE7 527 aa7.62□□□□□ -1.19
SPTA1-202ENST00000461624 VRTNQ9H8Y1 702 aa7.62□□□□□ -1.19
SPTA1-202ENST00000461624 CCDC87Q9NVE4 849 aa7.62□□□□□ -1.19
SPTA1-202ENST00000461624 ADAMTS7Q9UKP4 1686 aa7.61□□□□□ -1.19
SPTA1-202ENST00000461624 CYP27B1O15528 508 aa7.61□□□□□ -1.19
SPTA1-202ENST00000461624 LMNB1P20700 586 aa7.61□□□□□ -1.19
SPTA1-202ENST00000461624 TMF1P82094 1093 aa7.61□□□□□ -1.19
SPTA1-202ENST00000461624 MPRIPQ6WCQ1 1025 aa7.61□□□□□ -1.19
SPTA1-202ENST00000461624 BTLAQ7Z6A9 289 aa7.61□□□□□ -1.19
SPTA1-202ENST00000461624 RAB44Q7Z6P3 723 aaPredicted RBP7.61□□□□□ -1.19
SPTA1-202ENST00000461624 NLGN1Q8N2Q7 840 aa7.61□□□□□ -1.19
SPTA1-202ENST00000461624 PIGBQ92521 554 aa7.61□□□□□ -1.19
SPTA1-202ENST00000461624 RANBP2P49792 3224 aaKnown RBP7.61□□□□□ -1.19
SPTA1-202ENST00000461624 NRXN2Q9P2S2 1712 aa7.61□□□□□ -1.19
SPTA1-202ENST00000461624 HTTP42858 3142 aa7.61□□□□□ -1.19
SPTA1-202ENST00000461624 EVC2Q86UK5 1308 aa7.6□□□□□ -1.19
SPTA1-202ENST00000461624 RASSF10A6NK89 507 aa7.6□□□□□ -1.19
SPTA1-202ENST00000461624 NID1P14543 1247 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms