RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 AP3B2Q13367 1082 aa4.71□□□□□ -1.66
HDAC6-212ENST00000461608 TTBK2Q6IQ55 1244 aa4.71□□□□□ -1.66
HDAC6-212ENST00000461608 KIAA1211Q6ZU35 1233 aa4.71□□□□□ -1.66
HDAC6-212ENST00000461608 UBASH3BQ8TF42 649 aa4.71□□□□□ -1.66
HDAC6-212ENST00000461608 RHOVQ96L33 236 aa4.71□□□□□ -1.66
HDAC6-212ENST00000461608 POP1Q99575 1024 aaKnown RBP4.71□□□□□ -1.66
HDAC6-212ENST00000461608 SEC31BQ9NQW1 1179 aa4.71□□□□□ -1.66
HDAC6-212ENST00000461608 CYP8B1Q9UNU6 501 aa4.71□□□□□ -1.66
HDAC6-212ENST00000461608 PPME1Q9Y570 386 aa4.71□□□□□ -1.66
HDAC6-212ENST00000461608 ROBO2Q9HCK4 1378 aa4.7□□□□□ -1.66
HDAC6-212ENST00000461608 ENC1O14682 589 aa4.7□□□□□ -1.66
HDAC6-212ENST00000461608 TRPA1O75762 1119 aa4.7□□□□□ -1.66
HDAC6-212ENST00000461608 CELA3AP09093 270 aa4.7□□□□□ -1.66
HDAC6-212ENST00000461608 NME2P22392 152 aa4.7□□□□□ -1.66
HDAC6-212ENST00000461608 CDC27P30260 824 aa4.7□□□□□ -1.66
HDAC6-212ENST00000461608 EIF4A3P38919 411 aaKnown RBP4.7□□□□□ -1.66
HDAC6-212ENST00000461608 LMNB2Q03252 620 aa4.7□□□□□ -1.66
HDAC6-212ENST00000461608 PCDH1Q08174 1060 aa4.7□□□□□ -1.66
HDAC6-212ENST00000461608 HP1BP3Q5SSJ5 553 aaPredicted RBP4.7□□□□□ -1.66
HDAC6-212ENST00000461608 SOGA3Q5TF21 947 aa4.7□□□□□ -1.66
HDAC6-212ENST00000461608 PCNX4Q63HM2 1172 aa4.7□□□□□ -1.66
HDAC6-212ENST00000461608 HGSNATQ68CP4 663 aa4.7□□□□□ -1.66
HDAC6-212ENST00000461608 FAM117BQ6P1L5 589 aa4.7□□□□□ -1.66
HDAC6-212ENST00000461608 AGMOQ6ZNB7 445 aa4.7□□□□□ -1.66
HDAC6-212ENST00000461608 ACAD11Q709F0 780 aa4.7□□□□□ -1.66
HDAC6-212ENST00000461608 TRIM42Q8IWZ5 723 aa4.7□□□□□ -1.66
HDAC6-212ENST00000461608 SEC16BQ96JE7 1060 aa4.7□□□□□ -1.66
HDAC6-212ENST00000461608 HHIPQ96QV1 700 aa4.7□□□□□ -1.66
HDAC6-212ENST00000461608 HIRIP3Q9BW71 556 aaPredicted RBP4.7□□□□□ -1.66
HDAC6-212ENST00000461608 NT5C1AQ9BXI3 368 aa4.7□□□□□ -1.66
HDAC6-212ENST00000461608 C7orf69Q9H7B7 122 aa4.7□□□□□ -1.66
HDAC6-212ENST00000461608 PRKAG2Q9UGJ0 569 aa4.7□□□□□ -1.66
HDAC6-212ENST00000461608 METTL12A8MUP2 240 aa4.69□□□□□ -1.66
HDAC6-212ENST00000461608 BIN1O00499 593 aa4.69□□□□□ -1.66
HDAC6-212ENST00000461608 DNAJA1P31689 397 aaKnown RBP4.69□□□□□ -1.66
HDAC6-212ENST00000461608 ARL4DP49703 201 aa4.69□□□□□ -1.66
HDAC6-212ENST00000461608 PIP4K2BP78356 416 aa4.69□□□□□ -1.66
HDAC6-212ENST00000461608 PAK2Q13177 524 aa4.69□□□□□ -1.66
HDAC6-212ENST00000461608 IKBKEQ14164 716 aa4.69□□□□□ -1.66
HDAC6-212ENST00000461608 SPRED3Q2MJR0 410 aa4.69□□□□□ -1.66
HDAC6-212ENST00000461608 FBLN7Q53RD9 439 aa4.69□□□□□ -1.66
HDAC6-212ENST00000461608 SNAP47Q5SQN1 464 aa4.69□□□□□ -1.66
HDAC6-212ENST00000461608 CLEC10AQ8IUN9 316 aa4.69□□□□□ -1.66
HDAC6-212ENST00000461608 ABI1Q8IZP0 508 aa4.69□□□□□ -1.66
HDAC6-212ENST00000461608 PHC3Q8NDX5 983 aa4.69□□□□□ -1.66
HDAC6-212ENST00000461608 LRRC3Q9BY71 257 aa4.69□□□□□ -1.66
HDAC6-212ENST00000461608 MIR1-1HGQ9H1L0 117 aa4.69□□□□□ -1.66
HDAC6-212ENST00000461608 OSGEPQ9NPF4 335 aa4.69□□□□□ -1.66
HDAC6-212ENST00000461608 LEMD3Q9Y2U8 911 aa4.69□□□□□ -1.66
HDAC6-212ENST00000461608 HMX2A2RU54 273 aa4.68□□□□□ -1.66
HDAC6-212ENST00000461608 DBX1A6NMT0 343 aa4.68□□□□□ -1.66
HDAC6-212ENST00000461608 FSCN2O14926 492 aa4.68□□□□□ -1.66
HDAC6-212ENST00000461608 FBXO24O75426 580 aa4.68□□□□□ -1.66
HDAC6-212ENST00000461608 FGRP09769 529 aa4.68□□□□□ -1.66
HDAC6-212ENST00000461608 ESRRAP11474 423 aaPredicted RBP4.68□□□□□ -1.66
HDAC6-212ENST00000461608 ATF4P18848 351 aaPredicted RBP4.68□□□□□ -1.66
HDAC6-212ENST00000461608 CD68P34810 354 aaPredicted RBP4.68□□□□□ -1.66
HDAC6-212ENST00000461608 FAAP100Q0VG06 881 aa4.68□□□□□ -1.66
HDAC6-212ENST00000461608 LLGL2Q6P1M3 1020 aa4.68□□□□□ -1.66
HDAC6-212ENST00000461608 VN1R5Q7Z5H4 357 aa4.68□□□□□ -1.66
HDAC6-212ENST00000461608 SULF2Q8IWU5 870 aa4.68□□□□□ -1.66
HDAC6-212ENST00000461608 AGBL5Q8NDL9 886 aa4.68□□□□□ -1.66
HDAC6-212ENST00000461608 SHKBP1Q8TBC3 707 aa4.68□□□□□ -1.66
HDAC6-212ENST00000461608 KLHDC7BQ96G42 594 aa4.68□□□□□ -1.66
HDAC6-212ENST00000461608 FAM46AQ96IP4 442 aaKnown RBP4.68□□□□□ -1.66
HDAC6-212ENST00000461608 SLC38A3Q99624 504 aa4.68□□□□□ -1.66
HDAC6-212ENST00000461608 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.68□□□□□ -1.66
HDAC6-212ENST00000461608 COPRSQ9NQ92 184 aa4.68□□□□□ -1.66
HDAC6-212ENST00000461608 PIM2Q9P1W9 311 aa4.68□□□□□ -1.66
HDAC6-212ENST00000461608 WDR64B1ANS9 1081 aa4.67□□□□□ -1.66
HDAC6-212ENST00000461608 TRIM37O94972 964 aa4.67□□□□□ -1.66
HDAC6-212ENST00000461608 BPNT1O95861 308 aa4.67□□□□□ -1.66
HDAC6-212ENST00000461608 CYP11A1P05108 521 aa4.67□□□□□ -1.66
HDAC6-212ENST00000461608 TNNI2P48788 182 aa4.67□□□□□ -1.66
HDAC6-212ENST00000461608 CAMK2GQ13555 558 aaPredicted RBP4.67□□□□□ -1.66
HDAC6-212ENST00000461608 MPP2Q14168 576 aa4.67□□□□□ -1.66
HDAC6-212ENST00000461608 FAM196AQ6ZSG2 479 aa4.67□□□□□ -1.66
HDAC6-212ENST00000461608 KLHL23Q8NBE8 558 aa4.67□□□□□ -1.66
HDAC6-212ENST00000461608 ZNF296Q8WUU4 475 aaPredicted RBP4.67□□□□□ -1.66
HDAC6-212ENST00000461608 OSBPL1AQ9BXW6 950 aa4.67□□□□□ -1.66
HDAC6-212ENST00000461608 ADAMTS1Q9UHI8 967 aa4.67□□□□□ -1.66
HDAC6-212ENST00000461608 PRR19A6NJB7 356 aa4.66□□□□□ -1.66
HDAC6-212ENST00000461608 MINDY4BA8MYZ0 360 aa4.66□□□□□ -1.66
HDAC6-212ENST00000461608 GAS2O43903 313 aaKnown RBP4.66□□□□□ -1.66
HDAC6-212ENST00000461608 GREM1O60565 184 aa4.66□□□□□ -1.66
HDAC6-212ENST00000461608 STK10O94804 968 aaKnown RBP4.66□□□□□ -1.66
HDAC6-212ENST00000461608 SSBP05455 408 aaKnown RBP eCLIP4.66□□□□□ -1.66
HDAC6-212ENST00000461608 TFE3P19532 575 aaPredicted RBP4.66□□□□□ -1.66
HDAC6-212ENST00000461608 PREPP48147 710 aa4.66□□□□□ -1.66
HDAC6-212ENST00000461608 SOX9P48436 509 aa4.66□□□□□ -1.66
HDAC6-212ENST00000461608 APOBRQ0VD83 1088 aa4.66□□□□□ -1.66
HDAC6-212ENST00000461608 MAP3K11Q16584 847 aa4.66□□□□□ -1.66
HDAC6-212ENST00000461608 CWF19L2Q2TBE0 894 aaKnown RBP4.66□□□□□ -1.66
HDAC6-212ENST00000461608 NBPF6Q5VWK0 638 aa4.66□□□□□ -1.66
HDAC6-212ENST00000461608 VSIG10LQ86VR7 867 aa4.66□□□□□ -1.66
HDAC6-212ENST00000461608 KSR1Q8IVT5 923 aa4.66□□□□□ -1.66
HDAC6-212ENST00000461608 GOLM1Q8NBJ4 401 aa4.66□□□□□ -1.66
HDAC6-212ENST00000461608 GATAD2BQ8WXI9 593 aa4.66□□□□□ -1.66
HDAC6-212ENST00000461608 MYRFLQ96LU7 910 aa4.66□□□□□ -1.66
HDAC6-212ENST00000461608 NBPF4Q96M43 638 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms