RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 GTF2E1P29083 439 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-206ENST00000461574 LMOD1P29536 600 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-206ENST00000461574 ECE1P42892 770 aa6.79□□□□□ -1.32
BRCA1-206ENST00000461574 EIF5P55010 431 aaKnown RBP6.79□□□□□ -1.32
BRCA1-206ENST00000461574 TEFQ10587 303 aa6.79□□□□□ -1.32
BRCA1-206ENST00000461574 LBRQ14739 615 aaKnown RBP6.79□□□□□ -1.32
BRCA1-206ENST00000461574 MAP1SQ66K74 1059 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-206ENST00000461574 NBPF5PQ86XG9 351 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-206ENST00000461574 CNTROBQ8N137 903 aa6.79□□□□□ -1.32
BRCA1-206ENST00000461574 TEX13AQ9BXU3 409 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-206ENST00000461574 PANK3Q9H999 370 aa6.79□□□□□ -1.32
BRCA1-206ENST00000461574 ETNK1Q9HBU6 452 aa6.79□□□□□ -1.32
BRCA1-206ENST00000461574 ATXN7L1Q9ULK2 861 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-206ENST00000461574 SIPA1L3O60292 1781 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-206ENST00000461574 ZNF541Q9H0D2 1346 aa6.78□□□□□ -1.32
BRCA1-206ENST00000461574 BNIP3LO60238 219 aa6.78□□□□□ -1.32
BRCA1-206ENST00000461574 BMP4P12644 408 aa6.78□□□□□ -1.32
BRCA1-206ENST00000461574 IL13P35225 146 aa6.78□□□□□ -1.32
BRCA1-206ENST00000461574 IL6STP40189 918 aaPredicted RBP6.78□□□□□ -1.32
BRCA1-206ENST00000461574 CTBSQ01459 385 aa6.78□□□□□ -1.32
BRCA1-206ENST00000461574 FKBP4Q02790 459 aaKnown RBP eCLIP6.78□□□□□ -1.32
BRCA1-206ENST00000461574 EFHC2Q5JST6 749 aa6.78□□□□□ -1.32
BRCA1-206ENST00000461574 PHTF2Q8N3S3 785 aa6.78□□□□□ -1.32
BRCA1-206ENST00000461574 GOLGA6L1Q8N7Z2 621 aa6.78□□□□□ -1.32
BRCA1-206ENST00000461574 JDP2Q8WYK2 163 aa6.78□□□□□ -1.32
BRCA1-206ENST00000461574 SUV39H2Q9H5I1 410 aa6.78□□□□□ -1.32
BRCA1-206ENST00000461574 ZNF277Q9NRM2 450 aaPredicted RBP6.78□□□□□ -1.32
BRCA1-206ENST00000461574 NDFIP2Q9NV92 336 aa6.78□□□□□ -1.32
BRCA1-206ENST00000461574 ZNF652Q9Y2D9 606 aa6.78□□□□□ -1.32
BRCA1-206ENST00000461574 GJA3Q9Y6H8 435 aa6.78□□□□□ -1.32
BRCA1-206ENST00000461574 HEG1Q9ULI3 1381 aa6.78□□□□□ -1.32
BRCA1-206ENST00000461574 K7ELQ4 463 aaPredicted RBP6.77□□□□□ -1.33
BRCA1-206ENST00000461574 NPR1P16066 1061 aa6.77□□□□□ -1.33
BRCA1-206ENST00000461574 FGFR3P22607 806 aa6.77□□□□□ -1.33
BRCA1-206ENST00000461574 IARSP41252 1262 aaKnown RBP6.77□□□□□ -1.33
BRCA1-206ENST00000461574 BRPF1P55201 1214 aaPredicted RBP6.77□□□□□ -1.33
BRCA1-206ENST00000461574 EIF6P56537 245 aaKnown RBP6.77□□□□□ -1.33
BRCA1-206ENST00000461574 LINC00114Q6XXX2 140 aa6.77□□□□□ -1.33
BRCA1-206ENST00000461574 RTKN2Q8IZC4 609 aa6.77□□□□□ -1.33
BRCA1-206ENST00000461574 GPC2Q8N158 579 aa6.77□□□□□ -1.33
BRCA1-206ENST00000461574 RHBDD1Q8TEB9 315 aa6.77□□□□□ -1.33
BRCA1-206ENST00000461574 CAPNS2Q96L46 248 aa6.77□□□□□ -1.33
BRCA1-206ENST00000461574 DDX21Q9NR30 783 aaKnown RBP eCLIP6.77□□□□□ -1.33
BRCA1-206ENST00000461574 GGA1Q9UJY5 639 aa6.77□□□□□ -1.33
BRCA1-206ENST00000461574 DOLKQ9UPQ8 538 aa6.77□□□□□ -1.33
BRCA1-206ENST00000461574 KNSTRNQ9Y448 316 aa6.77□□□□□ -1.33
BRCA1-206ENST00000461574 LTBP1Q14766 1721 aa6.76□□□□□ -1.33
BRCA1-206ENST00000461574 FAM177BA6PVY3 158 aa6.76□□□□□ -1.33
BRCA1-206ENST00000461574 APBB1O00213 710 aa6.76□□□□□ -1.33
BRCA1-206ENST00000461574 USP4Q13107 963 aa6.76□□□□□ -1.33
BRCA1-206ENST00000461574 GRIN2CQ14957 1233 aa6.76□□□□□ -1.33
BRCA1-206ENST00000461574 TLR1Q15399 786 aa6.76□□□□□ -1.33
BRCA1-206ENST00000461574 MTHFSDQ2M296 383 aaKnown RBP6.76□□□□□ -1.33
BRCA1-206ENST00000461574 CYP4F22Q6NT55 531 aa6.76□□□□□ -1.33
BRCA1-206ENST00000461574 ZNF790Q6PG37 636 aa6.76□□□□□ -1.33
BRCA1-206ENST00000461574 SLCO4C1Q6ZQN7 724 aa6.76□□□□□ -1.33
BRCA1-206ENST00000461574 ZNF496Q96IT1 587 aaPredicted RBP6.76□□□□□ -1.33
BRCA1-206ENST00000461574 GPR101Q96P66 508 aaPredicted RBP6.76□□□□□ -1.33
BRCA1-206ENST00000461574 FMNL2Q96PY5 1086 aa6.76□□□□□ -1.33
BRCA1-206ENST00000461574 CASP8AP2Q9UKL3 1982 aa6.76□□□□□ -1.33
BRCA1-206ENST00000461574 GNAT3A8MTJ3 354 aa6.75□□□□□ -1.33
BRCA1-206ENST00000461574 CAMTA2O94983 1202 aa6.75□□□□□ -1.33
BRCA1-206ENST00000461574 A1BGP04217 495 aa6.75□□□□□ -1.33
BRCA1-206ENST00000461574 AMPD1P23109 780 aa6.75□□□□□ -1.33
BRCA1-206ENST00000461574 ALDH1B1P30837 517 aa6.75□□□□□ -1.33
BRCA1-206ENST00000461574 PLA2G4AP47712 749 aa6.75□□□□□ -1.33
BRCA1-206ENST00000461574 OXLD1Q5BKU9 147 aa6.75□□□□□ -1.33
BRCA1-206ENST00000461574 TPTE2Q6XPS3 522 aa6.75□□□□□ -1.33
BRCA1-206ENST00000461574 CRISPLD1Q9H336 500 aa6.75□□□□□ -1.33
BRCA1-206ENST00000461574 LAMB4A4D0S4 1761 aa6.74□□□□□ -1.33
BRCA1-206ENST00000461574 FZD9O00144 591 aa6.74□□□□□ -1.33
BRCA1-206ENST00000461574 U2SURPO15042 1029 aaKnown RBP6.74□□□□□ -1.33
BRCA1-206ENST00000461574 CA12O43570 354 aa6.74□□□□□ -1.33
BRCA1-206ENST00000461574 DIAPH1O60610 1272 aaKnown RBP6.74□□□□□ -1.33
BRCA1-206ENST00000461574 AOC2O75106 756 aa6.74□□□□□ -1.33
BRCA1-206ENST00000461574 FURINP09958 794 aa6.74□□□□□ -1.33
BRCA1-206ENST00000461574 EPXP11678 715 aa6.74□□□□□ -1.33
BRCA1-206ENST00000461574 PIP4K2AP48426 406 aaPredicted RBP6.74□□□□□ -1.33
BRCA1-206ENST00000461574 EIF4G2P78344 907 aaKnown RBP eCLIP6.74□□□□□ -1.33
BRCA1-206ENST00000461574 IRF5Q13568 498 aa6.74□□□□□ -1.33
BRCA1-206ENST00000461574 DGKZQ13574 1117 aa6.74□□□□□ -1.33
BRCA1-206ENST00000461574 SLFNL1Q499Z3 407 aa6.74□□□□□ -1.33
BRCA1-206ENST00000461574 OLFM4Q6UX06 510 aa6.74□□□□□ -1.33
BRCA1-206ENST00000461574 ALYREFQ86V81 257 aaKnown RBP6.74□□□□□ -1.33
BRCA1-206ENST00000461574 SYNE4Q8N205 404 aa6.74□□□□□ -1.33
BRCA1-206ENST00000461574 LARGE2Q8N3Y3 721 aa6.74□□□□□ -1.33
BRCA1-206ENST00000461574 GAS2L2Q8NHY3 880 aa6.74□□□□□ -1.33
BRCA1-206ENST00000461574 BTBD6Q96KE9 485 aa6.74□□□□□ -1.33
BRCA1-206ENST00000461574 TMX4Q9H1E5 349 aaPredicted RBP6.74□□□□□ -1.33
BRCA1-206ENST00000461574 DNAAF2Q9NVR5 837 aaKnown RBP6.74□□□□□ -1.33
BRCA1-206ENST00000461574 NIP7Q9Y221 180 aaKnown RBP eCLIP6.74□□□□□ -1.33
BRCA1-206ENST00000461574 PDE4DIPQ5VU43 2346 aa6.74□□□□□ -1.33
BRCA1-206ENST00000461574 BTBD11A6QL63 1104 aa6.73□□□□□ -1.33
BRCA1-206ENST00000461574 NEURL1BA8MQ27 555 aa6.73□□□□□ -1.33
BRCA1-206ENST00000461574 TRAF5O00463 557 aa6.73□□□□□ -1.33
BRCA1-206ENST00000461574 ATP4AP20648 1035 aa6.73□□□□□ -1.33
BRCA1-206ENST00000461574 MAP2K2P36507 400 aa6.73□□□□□ -1.33
BRCA1-206ENST00000461574 RGS19P49795 217 aa6.73□□□□□ -1.33
BRCA1-206ENST00000461574 SCNN1DP51172 638 aa6.73□□□□□ -1.33
BRCA1-206ENST00000461574 CLEC4GQ6UXB4 293 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms