RNA–Protein interactions for RNA: ENST00000461041.1

SNAPC3-204, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 2

Gene SNAPC3, Length 403 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-204ENST00000461041 ERC2O15083 957 aa24.3■■□□□ 1.48
SNAPC3-204ENST00000461041 DCAF15Q66K64 600 aa24.3■■□□□ 1.48
SNAPC3-204ENST00000461041 SH3BP5LQ7L8J4 393 aa24.3■■□□□ 1.48
SNAPC3-204ENST00000461041 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.3■■□□□ 1.484e-8■■□□□ 12.7
SNAPC3-204ENST00000461041 ZNF532Q9HCE3 1301 aa24.3■■□□□ 1.48
SNAPC3-204ENST00000461041 TCRBV5S4A2TA0A5A2 114 aa24.29■■□□□ 1.48
SNAPC3-204ENST00000461041 UNCXA6NJT0 531 aa24.29■■□□□ 1.48
SNAPC3-204ENST00000461041 GLRX3O76003 335 aaKnown RBP24.29■■□□□ 1.48
SNAPC3-204ENST00000461041 NUCB1Q02818 461 aa24.29■■□□□ 1.48
SNAPC3-204ENST00000461041 MIGA2Q7L4E1 593 aa24.29■■□□□ 1.48
SNAPC3-204ENST00000461041 CERS3Q8IU89 383 aa24.29■■□□□ 1.48
SNAPC3-204ENST00000461041 ZSCAN29Q8IWY8 852 aaPredicted RBP24.29■■□□□ 1.48
SNAPC3-204ENST00000461041 ANKRD13AQ8IZ07 590 aa24.29■■□□□ 1.48
SNAPC3-204ENST00000461041 CLMNQ96JQ2 1002 aa24.29■■□□□ 1.48
SNAPC3-204ENST00000461041 ZIC5Q96T25 663 aa24.29■■□□□ 1.48
SNAPC3-204ENST00000461041 AK9Q5TCS8 1911 aa24.29■■□□□ 1.48
SNAPC3-204ENST00000461041 OTOFQ9HC10 1997 aa24.29■■□□□ 1.48
SNAPC3-204ENST00000461041 DDTLA6NHG4 134 aaPredicted RBP24.28■■□□□ 1.48
SNAPC3-204ENST00000461041 ADD2P35612 726 aa24.28■■□□□ 1.48
SNAPC3-204ENST00000461041 CHD1LQ86WJ1 897 aa24.28■■□□□ 1.48
SNAPC3-204ENST00000461041 TGFBRAP1Q8WUH2 860 aa24.28■■□□□ 1.48
SNAPC3-204ENST00000461041 CSRNP1Q96S65 589 aa24.28■■□□□ 1.48
SNAPC3-204ENST00000461041 OSBPL5Q9H0X9 879 aaPredicted RBP24.28■■□□□ 1.48
SNAPC3-204ENST00000461041 CDK5RAP2Q96SN8 1893 aa24.28■■□□□ 1.48
SNAPC3-204ENST00000461041 COL2A1P02458 1487 aaPredicted RBP24.27■■□□□ 1.48
SNAPC3-204ENST00000461041 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.27■■□□□ 1.48
SNAPC3-204ENST00000461041 SLC10A4Q96EP9 437 aa24.27■■□□□ 1.48
SNAPC3-204ENST00000461041 RIOK1Q9BRS2 568 aaKnown RBP24.27■■□□□ 1.48
SNAPC3-204ENST00000461041 ZNF341Q9BYN7 854 aa24.27■■□□□ 1.48
SNAPC3-204ENST00000461041 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.27■■□□□ 1.48
SNAPC3-204ENST00000461041 STAP2Q9UGK3 403 aa24.27■■□□□ 1.48
SNAPC3-204ENST00000461041 ATRNL1Q5VV63 1379 aa24.27■■□□□ 1.48
SNAPC3-204ENST00000461041 FOCADQ5VW36 1801 aa24.26■■□□□ 1.47
SNAPC3-204ENST00000461041 MAGEB6P1A0A0J9YX57 407 aa24.26■■□□□ 1.47
SNAPC3-204ENST00000461041 PDE1AP54750 535 aa24.26■■□□□ 1.47
SNAPC3-204ENST00000461041 MAP3K9P80192 1104 aa24.26■■□□□ 1.47
SNAPC3-204ENST00000461041 SLFNL1Q499Z3 407 aa24.26■■□□□ 1.47
SNAPC3-204ENST00000461041 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.26■■□□□ 1.47
SNAPC3-204ENST00000461041 KBTBD3Q8NAB2 608 aa24.26■■□□□ 1.47
SNAPC3-204ENST00000461041 FLT1P17948 1338 aa24.26■■□□□ 1.47
SNAPC3-204ENST00000461041 MYH7P12883 1935 aa24.25■■□□□ 1.47
SNAPC3-204ENST00000461041 HSPA1AP0DMV8 641 aaKnown RBP24.25■■□□□ 1.47
SNAPC3-204ENST00000461041 HSPA1BP0DMV9 641 aaKnown RBP24.25■■□□□ 1.47
SNAPC3-204ENST00000461041 KIF23Q02241 960 aaPredicted RBP24.25■■□□□ 1.47
SNAPC3-204ENST00000461041 MAP2K1Q02750 393 aaPredicted RBP24.25■■□□□ 1.47
SNAPC3-204ENST00000461041 ZSCAN25Q6NSZ9 544 aa24.25■■□□□ 1.47
SNAPC3-204ENST00000461041 MAPKAPK5Q8IW41 473 aa24.25■■□□□ 1.47
SNAPC3-204ENST00000461041 WRNIP1Q96S55 665 aa24.25■■□□□ 1.47
SNAPC3-204ENST00000461041 CHGBP05060 677 aa24.24■■□□□ 1.47
SNAPC3-204ENST00000461041 VGLL4Q14135 290 aa24.24■■□□□ 1.47
SNAPC3-204ENST00000461041 UBE3CQ15386 1083 aa24.24■■□□□ 1.47
SNAPC3-204ENST00000461041 WBP1LQ9NX94 342 aa24.24■■□□□ 1.47
SNAPC3-204ENST00000461041 MKRN3Q13064 507 aaKnown RBP24.23■■□□□ 1.47
SNAPC3-204ENST00000461041 SPRYD7Q5W111 196 aa24.23■■□□□ 1.47
SNAPC3-204ENST00000461041 WNK4Q96J92 1243 aa24.23■■□□□ 1.47
SNAPC3-204ENST00000461041 ELP3Q9H9T3 547 aa24.23■■□□□ 1.47
SNAPC3-204ENST00000461041 ZNF112Q9UJU3 913 aa24.23■■□□□ 1.47
SNAPC3-204ENST00000461041 CSADQ9Y600 493 aa24.23■■□□□ 1.47
SNAPC3-204ENST00000461041 USP5P45974 858 aa24.22■■□□□ 1.47
SNAPC3-204ENST00000461041 MAP3K10Q02779 954 aa24.22■■□□□ 1.47
SNAPC3-204ENST00000461041 ZKSCAN4Q969J2 545 aaPredicted RBP24.22■■□□□ 1.47
SNAPC3-204ENST00000461041 DHX36Q9H2U1 1008 aaKnown RBP24.22■■□□□ 1.47
SNAPC3-204ENST00000461041 SLURP2P0DP57 97 aa24.21■■□□□ 1.47
SNAPC3-204ENST00000461041 INPP5BP32019 993 aa24.21■■□□□ 1.47
SNAPC3-204ENST00000461041 LCORLQ8N3X6 602 aa24.21■■□□□ 1.47
SNAPC3-204ENST00000461041 CRNKL1Q9BZJ0 848 aaKnown RBP24.21■■□□□ 1.47
SNAPC3-204ENST00000461041 SNCAIPQ9Y6H5 919 aa24.21■■□□□ 1.47
SNAPC3-204ENST00000461041 MBD4O95243 580 aa24.2■■□□□ 1.46
SNAPC3-204ENST00000461041 PLEKHM2Q8IWE5 1019 aa24.2■■□□□ 1.46
SNAPC3-204ENST00000461041 AIDAQ96BJ3 306 aa24.2■■□□□ 1.46
SNAPC3-204ENST00000461041 ARMT1Q9H993 441 aa24.2■■□□□ 1.46
SNAPC3-204ENST00000461041 SAP30BPQ9UHR5 308 aaKnown RBP24.2■■□□□ 1.46
SNAPC3-204ENST00000461041 PHF20L1A8MW92 1017 aa24.19■■□□□ 1.46
SNAPC3-204ENST00000461041 RNF113AO15541 343 aaKnown RBP24.19■■□□□ 1.46
SNAPC3-204ENST00000461041 TBC1D12O60347 775 aa24.19■■□□□ 1.46
SNAPC3-204ENST00000461041 ZBTB48P10074 688 aaPredicted RBP24.19■■□□□ 1.46
SNAPC3-204ENST00000461041 GJA5P36382 358 aa24.19■■□□□ 1.46
SNAPC3-204ENST00000461041 OPTNQ96CV9 577 aa24.19■■□□□ 1.46
SNAPC3-204ENST00000461041 BEGAINQ9BUH8 593 aa24.19■■□□□ 1.46
SNAPC3-204ENST00000461041 PI4KBQ9UBF8 816 aa24.19■■□□□ 1.46
SNAPC3-204ENST00000461041 PALD1Q9ULE6 856 aa24.19■■□□□ 1.46
SNAPC3-204ENST00000461041 ZFYP08048 801 aaPredicted RBP24.18■■□□□ 1.46
SNAPC3-204ENST00000461041 LRRFIP1Q32MZ4 808 aaKnown RBP24.18■■□□□ 1.46
SNAPC3-204ENST00000461041 REM2Q8IYK8 340 aaPredicted RBP24.18■■□□□ 1.46
SNAPC3-204ENST00000461041 CNKSR2Q8WXI2 1034 aa24.18■■□□□ 1.46
SNAPC3-204ENST00000461041 FSD1Q9BTV5 496 aa24.18■■□□□ 1.46
SNAPC3-204ENST00000461041 PUS7LQ9H0K6 701 aaKnown RBP24.18■■□□□ 1.46
SNAPC3-204ENST00000461041 SIPA1L1O43166 1804 aa24.18■■□□□ 1.46
SNAPC3-204ENST00000461041 SPDYE5A6NIY4 337 aa24.17■■□□□ 1.46
SNAPC3-204ENST00000461041 FAM196BA6NMK8 535 aa24.17■■□□□ 1.46
SNAPC3-204ENST00000461041 FOXN1O15353 648 aa24.17■■□□□ 1.46
SNAPC3-204ENST00000461041 CENPBP07199 599 aaPredicted RBP24.17■■□□□ 1.46
SNAPC3-204ENST00000461041 SDR42E1Q8WUS8 393 aa24.17■■□□□ 1.46
SNAPC3-204ENST00000461041 APPBP2Q92624 585 aa24.17■■□□□ 1.46
SNAPC3-204ENST00000461041 OSBPL3Q9H4L5 887 aa24.17■■□□□ 1.46
SNAPC3-204ENST00000461041 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.17■■□□□ 1.462e-7■■■■□ 25.2
SNAPC3-204ENST00000461041 HERC5Q9UII4 1024 aaKnown RBP24.17■■□□□ 1.46
SNAPC3-204ENST00000461041 MYH1P12882 1939 aa24.17■■□□□ 1.46
SNAPC3-204ENST00000461041 HLA-DOAP06340 250 aa24.16■■□□□ 1.46
SNAPC3-204ENST00000461041 SLC4A8Q2Y0W8 1093 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms