RNA–Protein interactions for RNA: ENST00000460378.1

EPB41-208, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best)

Gene EPB41, Length 5,212 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-208ENST00000460378 HDLBPQ00341 1268 aaKnown RBP11.58□□□□□ -0.56
EPB41-208ENST00000460378 BEND3Q5T5X7 828 aa11.58□□□□□ -0.56
EPB41-208ENST00000460378 FAM151AQ8WW52 585 aa11.58□□□□□ -0.56
EPB41-208ENST00000460378 OPTNQ96CV9 577 aa11.58□□□□□ -0.56
EPB41-208ENST00000460378 CDK5RAP3Q96JB5 506 aa11.58□□□□□ -0.56
EPB41-208ENST00000460378 FBXO40Q9UH90 709 aa11.58□□□□□ -0.56
EPB41-208ENST00000460378 FTOQ9C0B1 505 aaKnown RBP eCLIP11.57□□□□□ -0.56
EPB41-208ENST00000460378 SAMM50Q9Y512 469 aa11.57□□□□□ -0.56
EPB41-208ENST00000460378 ZNF541Q9H0D2 1346 aa11.57□□□□□ -0.56
EPB41-208ENST00000460378 CYP2B6P20813 491 aa11.57□□□□□ -0.56
EPB41-208ENST00000460378 PDE4DQ08499 809 aa11.57□□□□□ -0.56
EPB41-208ENST00000460378 SERPINB13Q9UIV8 391 aa11.57□□□□□ -0.56
EPB41-208ENST00000460378 USP17L15C9J2P7 530 aa11.57□□□□□ -0.56
EPB41-208ENST00000460378 USP17L13C9JLJ4 530 aa11.57□□□□□ -0.56
EPB41-208ENST00000460378 USP17L11C9JVI0 530 aa11.57□□□□□ -0.56
EPB41-208ENST00000460378 USP17L18D6R9N7 530 aa11.57□□□□□ -0.56
EPB41-208ENST00000460378 USP17L22D6RA61 530 aa11.57□□□□□ -0.56
EPB41-208ENST00000460378 USP17L17D6RBQ6 530 aa11.57□□□□□ -0.56
EPB41-208ENST00000460378 USP17L19D6RCP7 530 aa11.57□□□□□ -0.56
EPB41-208ENST00000460378 USP17L20D6RJB6 530 aa11.57□□□□□ -0.56
EPB41-208ENST00000460378 POTEB2H3BUK9 544 aa11.57□□□□□ -0.56
EPB41-208ENST00000460378 RGS2P41220 211 aa11.57□□□□□ -0.56
EPB41-208ENST00000460378 USP17L24Q0WX57 530 aa11.57□□□□□ -0.56
EPB41-208ENST00000460378 HERC5Q9UII4 1024 aaKnown RBP11.57□□□□□ -0.56
EPB41-208ENST00000460378 ARHGEF28Q8N1W1 1705 aaKnown RBP11.57□□□□□ -0.56
EPB41-208ENST00000460378 NBPF7P0C2Y1 421 aaPredicted RBP11.57□□□□□ -0.56
EPB41-208ENST00000460378 RRP1P56182 461 aaKnown RBP11.57□□□□□ -0.56
EPB41-208ENST00000460378 LRRC24Q50LG9 513 aa11.57□□□□□ -0.56
EPB41-208ENST00000460378 ERICH6BQ5W0A0 696 aa11.57□□□□□ -0.56
EPB41-208ENST00000460378 ARPP21Q9UBL0 812 aaPredicted RBP11.57□□□□□ -0.56
EPB41-208ENST00000460378 SF3A1Q15459 793 aaKnown RBP11.56□□□□□ -0.56
EPB41-208ENST00000460378 PPP2R3CQ969Q6 453 aa11.56□□□□□ -0.56
EPB41-208ENST00000460378 TMED8Q6PL24 325 aaPredicted RBP11.56□□□□□ -0.56
EPB41-208ENST00000460378 RNF113AO15541 343 aaKnown RBP11.56□□□□□ -0.56
EPB41-208ENST00000460378 ENTPD3O75355 529 aa11.56□□□□□ -0.56
EPB41-208ENST00000460378 TBC1D8O95759 1140 aa11.56□□□□□ -0.56
EPB41-208ENST00000460378 KRT32Q14532 448 aa11.56□□□□□ -0.56
EPB41-208ENST00000460378 GPRC5AQ8NFJ5 357 aa11.56□□□□□ -0.56
EPB41-208ENST00000460378 ALAS1P13196 640 aa11.56□□□□□ -0.56
EPB41-208ENST00000460378 TRIM27P14373 513 aa11.56□□□□□ -0.56
EPB41-208ENST00000460378 TRIM21P19474 475 aaKnown RBP11.56□□□□□ -0.56
EPB41-208ENST00000460378 VEGFBP49765 207 aa11.56□□□□□ -0.56
EPB41-208ENST00000460378 RSPH3Q86UC2 560 aa11.56□□□□□ -0.56
EPB41-208ENST00000460378 HOMER1Q86YM7 354 aa11.56□□□□□ -0.56
EPB41-208ENST00000460378 PLEKHF1Q96S99 279 aa11.56□□□□□ -0.56
EPB41-208ENST00000460378 IBTKQ9P2D0 1353 aaPredicted RBP11.56□□□□□ -0.56
EPB41-208ENST00000460378 MED23Q9ULK4 1368 aa11.56□□□□□ -0.56
EPB41-208ENST00000460378 KDM4AO75164 1064 aa11.55□□□□□ -0.56
EPB41-208ENST00000460378 GDF11O95390 407 aa11.55□□□□□ -0.56
EPB41-208ENST00000460378 PSMC4P43686 418 aa11.55□□□□□ -0.56
EPB41-208ENST00000460378 MAP3K11Q16584 847 aa11.55□□□□□ -0.56
EPB41-208ENST00000460378 TPRNQ4KMQ1 711 aa11.55□□□□□ -0.56
EPB41-208ENST00000460378 POLLQ9UGP5 575 aa11.55□□□□□ -0.56
EPB41-208ENST00000460378 NRKQ7Z2Y5 1582 aa11.55□□□□□ -0.56
EPB41-208ENST00000460378 KDM6AO15550 1401 aaPredicted RBP11.55□□□□□ -0.56
EPB41-208ENST00000460378 NFKBIEO00221 500 aa11.55□□□□□ -0.56
EPB41-208ENST00000460378 CDKL5O76039 1030 aa11.55□□□□□ -0.56
EPB41-208ENST00000460378 DIXDC1Q155Q3 683 aa11.55□□□□□ -0.56
EPB41-208ENST00000460378 HHIPL2Q6UWX4 724 aa11.55□□□□□ -0.56
EPB41-208ENST00000460378 CCDC155Q8N6L0 562 aa11.55□□□□□ -0.56
EPB41-208ENST00000460378 DRC1Q96MC2 740 aa11.55□□□□□ -0.56
EPB41-208ENST00000460378 PUS3Q9BZE2 481 aaKnown RBP11.55□□□□□ -0.56
EPB41-208ENST00000460378 CWC27Q6UX04 472 aaKnown RBP11.55□□□□□ -0.56
EPB41-208ENST00000460378 FCER1AP12319 257 aa11.55□□□□□ -0.56
EPB41-208ENST00000460378 SPDYE3A6NKU9 549 aa11.54□□□□□ -0.56
EPB41-208ENST00000460378 MATR3P43243 847 aaKnown RBP eCLIP11.54□□□□□ -0.56
EPB41-208ENST00000460378 IFIT1BQ5T764 474 aaKnown RBP11.54□□□□□ -0.56
EPB41-208ENST00000460378 MCTP1Q6DN14 999 aa11.54□□□□□ -0.56
EPB41-208ENST00000460378 ZBTB33Q86T24 672 aa11.54□□□□□ -0.56
EPB41-208ENST00000460378 SLC4A9Q96Q91 983 aa11.54□□□□□ -0.56
EPB41-208ENST00000460378 DNAI2Q9GZS0 605 aa11.54□□□□□ -0.56
EPB41-208ENST00000460378 KANSL2Q9H9L4 492 aa11.54□□□□□ -0.56
EPB41-208ENST00000460378 HMX1Q9NP08 348 aaPredicted RBP11.54□□□□□ -0.56
EPB41-208ENST00000460378 KRT18P05783 430 aaKnown RBP11.54□□□□□ -0.56
EPB41-208ENST00000460378 PHKA1P46020 1223 aa11.54□□□□□ -0.56
EPB41-208ENST00000460378 DBNDD2Q9BQY9 259 aa11.54□□□□□ -0.56
EPB41-208ENST00000460378 ARMT1Q9H993 441 aa11.54□□□□□ -0.56
EPB41-208ENST00000460378 CLIP2Q9UDT6 1046 aa11.54□□□□□ -0.56
EPB41-208ENST00000460378 CPA4Q9UI42 421 aa11.54□□□□□ -0.56
EPB41-208ENST00000460378 TBC1D9Q6ZT07 1266 aa11.54□□□□□ -0.56
EPB41-208ENST00000460378 ZNF280CQ8ND82 737 aa11.54□□□□□ -0.56
EPB41-208ENST00000460378 NRXN3Q9Y4C0 1643 aa11.54□□□□□ -0.56
EPB41-208ENST00000460378 GLI3P10071 1580 aa11.54□□□□□ -0.56
EPB41-208ENST00000460378 RGPD1P0DJD0 1748 aa11.54□□□□□ -0.56
EPB41-208ENST00000460378 HTRA3P83110 453 aa11.54□□□□□ -0.56
EPB41-208ENST00000460378 NBPF9Q3BBW0 867 aa11.54□□□□□ -0.56
EPB41-208ENST00000460378 GNPTABQ3T906 1256 aa11.54□□□□□ -0.56
EPB41-208ENST00000460378 ELMSAN1Q6PJG2 1045 aa11.54□□□□□ -0.56
EPB41-208ENST00000460378 CHST3Q7LGC8 479 aa11.54□□□□□ -0.56
EPB41-208ENST00000460378 SLC12A7Q9Y666 1083 aa11.54□□□□□ -0.56
EPB41-208ENST00000460378 VIL1P09327 827 aaKnown RBP11.53□□□□□ -0.56
EPB41-208ENST00000460378 GINM1Q9NU53 330 aa11.53□□□□□ -0.56
EPB41-208ENST00000460378 DCDC2CA8MYV0 355 aa11.53□□□□□ -0.56
EPB41-208ENST00000460378 CXCL11O14625 94 aa11.53□□□□□ -0.56
EPB41-208ENST00000460378 KCNJ6P48051 423 aa11.53□□□□□ -0.56
EPB41-208ENST00000460378 SOX10P56693 466 aa11.53□□□□□ -0.56
EPB41-208ENST00000460378 RNF180Q86T96 592 aa11.53□□□□□ -0.56
EPB41-208ENST00000460378 AZI2Q9H6S1 392 aa11.53□□□□□ -0.56
EPB41-208ENST00000460378 ST18O60284 1047 aa11.53□□□□□ -0.56
EPB41-208ENST00000460378 CTNND1O60716 968 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms