RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 MORC2Q9Y6X9 1032 aaPredicted RBP18.41■□□□□ 0.54
CMTM3-203ENST00000460097 SCN9AQ15858 1988 aa18.41■□□□□ 0.54
CMTM3-203ENST00000460097 RPS12P25398 132 aaKnown RBP18.4■□□□□ 0.54
CMTM3-203ENST00000460097 PHKA1P46020 1223 aa18.4■□□□□ 0.54
CMTM3-203ENST00000460097 FOXD4L6Q3SYB3 417 aaPredicted RBP18.4■□□□□ 0.54
CMTM3-203ENST00000460097 DACT2Q5SW24 774 aa18.4■□□□□ 0.54
CMTM3-203ENST00000460097 FOXD4L3Q6VB84 417 aaPredicted RBP18.4■□□□□ 0.54
CMTM3-203ENST00000460097 RASEFQ8IZ41 740 aa18.4■□□□□ 0.54
CMTM3-203ENST00000460097 DPF2Q92785 391 aa18.4■□□□□ 0.54
CMTM3-203ENST00000460097 SCAND2PQ9GZW5 306 aaPredicted RBP18.4■□□□□ 0.54
CMTM3-203ENST00000460097 CCDC8Q9H0W5 538 aaPredicted RBP18.4■□□□□ 0.54
CMTM3-203ENST00000460097 KCND1Q9NSA2 647 aa18.4■□□□□ 0.54
CMTM3-203ENST00000460097 IQCA1LA6NCM1 817 aa18.4■□□□□ 0.54
CMTM3-203ENST00000460097 POTECB2RU33 542 aa18.4■□□□□ 0.54
CMTM3-203ENST00000460097 LMOD1P29536 600 aaPredicted RBP18.4■□□□□ 0.54
CMTM3-203ENST00000460097 AACSQ86V21 672 aa18.4■□□□□ 0.54
CMTM3-203ENST00000460097 AGBL3Q8NEM8 1001 aa18.4■□□□□ 0.54
CMTM3-203ENST00000460097 SNRKQ9NRH2 765 aa18.4■□□□□ 0.54
CMTM3-203ENST00000460097 FAM205AQ6ZU69 1335 aa18.39■□□□□ 0.53
CMTM3-203ENST00000460097 GLRX3O76003 335 aaKnown RBP18.39■□□□□ 0.53
CMTM3-203ENST00000460097 U2AF2P26368 475 aaKnown RBP eCLIP18.39■□□□□ 0.53
CMTM3-203ENST00000460097 SCNN1DP51172 638 aa18.39■□□□□ 0.53
CMTM3-203ENST00000460097 ZNF75DP51815 510 aa18.39■□□□□ 0.53
CMTM3-203ENST00000460097 DBNDD2Q9BQY9 259 aa18.39■□□□□ 0.53
CMTM3-203ENST00000460097 PDRG1Q9NUG6 133 aa18.39■□□□□ 0.53
CMTM3-203ENST00000460097 GPRC5DQ9NZD1 345 aa18.39■□□□□ 0.53
CMTM3-203ENST00000460097 HACL1Q9UJ83 578 aa18.39■□□□□ 0.53
CMTM3-203ENST00000460097 JAG2Q9Y219 1238 aa18.39■□□□□ 0.53
CMTM3-203ENST00000460097 CYP46A1Q9Y6A2 500 aa18.39■□□□□ 0.53
CMTM3-203ENST00000460097 PTGS1P23219 599 aa18.38■□□□□ 0.53
CMTM3-203ENST00000460097 CCDC158Q5M9N0 1113 aa18.38■□□□□ 0.53
CMTM3-203ENST00000460097 SARM1Q6SZW1 724 aa18.38■□□□□ 0.53
CMTM3-203ENST00000460097 MXD3Q9BW11 206 aa18.38■□□□□ 0.53
CMTM3-203ENST00000460097 CNOT7Q9UIV1 285 aaKnown RBP18.38■□□□□ 0.53
CMTM3-203ENST00000460097 MYO3BQ8WXR4 1341 aa18.38■□□□□ 0.53
CMTM3-203ENST00000460097 WDR90Q96KV7 1748 aa18.38■□□□□ 0.53
CMTM3-203ENST00000460097 SEMA3EO15041 775 aa18.37■□□□□ 0.53
CMTM3-203ENST00000460097 IFIT2P09913 472 aaKnown RBP18.37■□□□□ 0.53
CMTM3-203ENST00000460097 SLFNL1Q499Z3 407 aa18.37■□□□□ 0.53
CMTM3-203ENST00000460097 DBNLQ9UJU6 430 aaKnown RBP18.37■□□□□ 0.53
CMTM3-203ENST00000460097 DENND2AQ9ULE3 1009 aa18.37■□□□□ 0.53
CMTM3-203ENST00000460097 H7C1D1 291 aa18.37■□□□□ 0.53
CMTM3-203ENST00000460097 ZBTB22O15209 634 aa18.37■□□□□ 0.53
CMTM3-203ENST00000460097 CASTP20810 708 aaKnown RBP18.37■□□□□ 0.53
CMTM3-203ENST00000460097 EPS15P42566 896 aa18.37■□□□□ 0.53
CMTM3-203ENST00000460097 FKBP1AP62942 108 aaKnown RBP18.37■□□□□ 0.53
CMTM3-203ENST00000460097 ANKRD1Q15327 319 aa18.37■□□□□ 0.53
CMTM3-203ENST00000460097 ZSCAN25Q6NSZ9 544 aa18.37■□□□□ 0.53
CMTM3-203ENST00000460097 GMLQ99445 158 aa18.37■□□□□ 0.53
CMTM3-203ENST00000460097 CLSTN2Q9H4D0 955 aa18.37■□□□□ 0.53
CMTM3-203ENST00000460097 FAM53CQ9NYF3 392 aa18.37■□□□□ 0.53
CMTM3-203ENST00000460097 TLR7Q9NYK1 1049 aaKnown RBP18.37■□□□□ 0.53
CMTM3-203ENST00000460097 UQCRFS1P1P0C7P4 283 aa18.36■□□□□ 0.53
CMTM3-203ENST00000460097 EPHX2P34913 555 aa18.36■□□□□ 0.53
CMTM3-203ENST00000460097 MFSD14BQ5SR56 506 aa18.36■□□□□ 0.53
CMTM3-203ENST00000460097 TTC39AQ5SRH9 613 aa18.36■□□□□ 0.53
CMTM3-203ENST00000460097 TTC6Q86TZ1 520 aa18.36■□□□□ 0.53
CMTM3-203ENST00000460097 CCDC112Q8NEF3 446 aa18.36■□□□□ 0.53
CMTM3-203ENST00000460097 TBC1D22AQ8WUA7 517 aa18.36■□□□□ 0.53
CMTM3-203ENST00000460097 TAF1DQ9H5J8 278 aaPredicted RBP18.36■□□□□ 0.53
CMTM3-203ENST00000460097 CBX8Q9HC52 389 aa18.36■□□□□ 0.53
CMTM3-203ENST00000460097 HIP1O00291 1037 aa18.35■□□□□ 0.53
CMTM3-203ENST00000460097 TNNT1P13805 278 aa18.35■□□□□ 0.53
CMTM3-203ENST00000460097 CCDC186Q7Z3E2 898 aa18.35■□□□□ 0.53
CMTM3-203ENST00000460097 CCDC83Q8IWF9 413 aa18.35■□□□□ 0.53
CMTM3-203ENST00000460097 MICALL2Q8IY33 904 aa18.35■□□□□ 0.53
CMTM3-203ENST00000460097 CERS5Q8N5B7 392 aa18.35■□□□□ 0.53
CMTM3-203ENST00000460097 SPC24Q8NBT2 197 aa18.35■□□□□ 0.53
CMTM3-203ENST00000460097 WDR66Q8TBY9 1149 aa18.35■□□□□ 0.53
CMTM3-203ENST00000460097 ARAP2Q8WZ64 1704 aa18.35■□□□□ 0.53
CMTM3-203ENST00000460097 PSME4Q14997 1843 aa18.35■□□□□ 0.53
CMTM3-203ENST00000460097 KIF3CO14782 793 aa18.35■□□□□ 0.53
CMTM3-203ENST00000460097 USP17L8P0C7I0 530 aa18.35■□□□□ 0.53
CMTM3-203ENST00000460097 PSMA5P28066 241 aa18.35■□□□□ 0.53
CMTM3-203ENST00000460097 ARID4AP29374 1257 aaPredicted RBP18.35■□□□□ 0.53
CMTM3-203ENST00000460097 PLCB2Q00722 1185 aa18.35■□□□□ 0.53
CMTM3-203ENST00000460097 RASGRF1Q13972 1273 aa18.35■□□□□ 0.53
CMTM3-203ENST00000460097 NECTIN1Q15223 517 aa18.35■□□□□ 0.53
CMTM3-203ENST00000460097 RNF20Q5VTR2 975 aa18.35■□□□□ 0.53
CMTM3-203ENST00000460097 OGFOD1Q8N543 542 aa18.35■□□□□ 0.53
CMTM3-203ENST00000460097 TNMDQ9H2S6 317 aa18.35■□□□□ 0.53
CMTM3-203ENST00000460097 ADARB2Q9NS39 739 aaKnown RBP18.35■□□□□ 0.53
CMTM3-203ENST00000460097 SPDYE4A6NLX3 237 aa18.34■□□□□ 0.53
CMTM3-203ENST00000460097 KIF2AO00139 706 aaPredicted RBP18.34■□□□□ 0.53
CMTM3-203ENST00000460097 LARGE1O95461 756 aa18.34■□□□□ 0.53
CMTM3-203ENST00000460097 ZKSCAN1P17029 563 aaPredicted RBP18.34■□□□□ 0.53
CMTM3-203ENST00000460097 ST3GAL1Q11201 340 aa18.34■□□□□ 0.53
CMTM3-203ENST00000460097 KIAA0825Q8IV33 1275 aa18.34■□□□□ 0.53
CMTM3-203ENST00000460097 MRFAP1L1Q96HT8 127 aa18.34■□□□□ 0.53
CMTM3-203ENST00000460097 ZNF512BQ96KM6 892 aaPredicted RBP18.34■□□□□ 0.53
CMTM3-203ENST00000460097 SCN4AP35499 1836 aa18.33■□□□□ 0.53
CMTM3-203ENST00000460097 SHTN1A0MZ66 631 aa18.33■□□□□ 0.53
CMTM3-203ENST00000460097 MMP14P50281 582 aa18.33■□□□□ 0.53
CMTM3-203ENST00000460097 PNMA8AQ86V59 439 aaPredicted RBP18.33■□□□□ 0.53
CMTM3-203ENST00000460097 ZNF397Q8NF99 534 aaPredicted RBP18.33■□□□□ 0.53
CMTM3-203ENST00000460097 ZNF280AP59817 542 aaPredicted RBP18.32■□□□□ 0.52
CMTM3-203ENST00000460097 LARP1BQ659C4 914 aaKnown RBP18.32■□□□□ 0.52
CMTM3-203ENST00000460097 USP50Q70EL3 339 aaPredicted RBP18.32■□□□□ 0.52
CMTM3-203ENST00000460097 SPATA5Q8NB90 893 aa18.32■□□□□ 0.52
CMTM3-203ENST00000460097 KIF18AQ8NI77 898 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms