RNA–Protein interactions for RNA: ENST00000460004.1

USP34-206, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 4

Gene USP34, Length 572 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-206ENST00000460004 IFIT2P09913 472 aaKnown RBP9.15□□□□□ -0.94
USP34-206ENST00000460004 GPTP24298 496 aa9.15□□□□□ -0.94
USP34-206ENST00000460004 SSFA2P28290 1259 aa9.15□□□□□ -0.94
USP34-206ENST00000460004 RFC4P35249 363 aa9.15□□□□□ -0.94
USP34-206ENST00000460004 IL15P40933 162 aaPredicted RBP9.15□□□□□ -0.94
USP34-206ENST00000460004 IFIT5Q13325 482 aaKnown RBP9.15□□□□□ -0.94
USP34-206ENST00000460004 TAF7LQ5H9L4 462 aa9.15□□□□□ -0.94
USP34-206ENST00000460004 TRAPPC3LQ5T215 181 aa9.15□□□□□ -0.94
USP34-206ENST00000460004 TTC22Q5TAA0 569 aa9.15□□□□□ -0.94
USP34-206ENST00000460004 SKAP1Q86WV1 359 aa9.15□□□□□ -0.94
USP34-206ENST00000460004 BANK1Q8NDB2 785 aa9.15□□□□□ -0.94
USP34-206ENST00000460004 FAM89AQ96GI7 184 aa9.15□□□□□ -0.94
USP34-206ENST00000460004 CNTNAP3BQ96NU0 1288 aa9.15□□□□□ -0.94
USP34-206ENST00000460004 CNTNAP3Q9BZ76 1288 aa9.15□□□□□ -0.94
USP34-206ENST00000460004 STAP2Q9UGK3 403 aa9.15□□□□□ -0.94
USP34-206ENST00000460004 NIP7Q9Y221 180 aaKnown RBP eCLIP9.15□□□□□ -0.94
USP34-206ENST00000460004 C4AP0C0L4 1744 aa9.14□□□□□ -0.95
USP34-206ENST00000460004 UBN2Q6ZU65 1347 aa9.14□□□□□ -0.95
USP34-206ENST00000460004 IRS4O14654 1257 aaPredicted RBP9.14□□□□□ -0.95
USP34-206ENST00000460004 SMARCA5O60264 1052 aaPredicted RBP9.14□□□□□ -0.95
USP34-206ENST00000460004 CSF1RP07333 972 aa9.14□□□□□ -0.95
USP34-206ENST00000460004 ANP32AP39687 249 aaKnown RBP9.14□□□□□ -0.95
USP34-206ENST00000460004 PDE1AP54750 535 aa9.14□□□□□ -0.95
USP34-206ENST00000460004 CTSWP56202 376 aa9.14□□□□□ -0.95
USP34-206ENST00000460004 PTPN12Q05209 780 aaKnown RBP9.14□□□□□ -0.95
USP34-206ENST00000460004 NR1H3Q13133 447 aa9.14□□□□□ -0.95
USP34-206ENST00000460004 PTF1AQ7RTS3 328 aa9.14□□□□□ -0.95
USP34-206ENST00000460004 FLAD1Q8NFF5 587 aa9.14□□□□□ -0.95
USP34-206ENST00000460004 SETDB2Q96T68 719 aa9.14□□□□□ -0.95
USP34-206ENST00000460004 GPR108Q9NPR9 543 aa9.14□□□□□ -0.95
USP34-206ENST00000460004 UBR3Q6ZT12 1888 aa9.14□□□□□ -0.95
USP34-206ENST00000460004 COL24A1Q17RW2 1714 aa9.14□□□□□ -0.95
USP34-206ENST00000460004 RTL9Q8NET4 1388 aa9.13□□□□□ -0.95
USP34-206ENST00000460004 SALL3Q9BXA9 1300 aa9.13□□□□□ -0.95
USP34-206ENST00000460004 USP42Q9H9J4 1324 aaKnown RBP9.13□□□□□ -0.95
USP34-206ENST00000460004 ANKRD18BA2A2Z9 1011 aa9.13□□□□□ -0.95
USP34-206ENST00000460004 CDC14CA4D256 554 aa9.13□□□□□ -0.95
USP34-206ENST00000460004 CDC45O75419 566 aa9.13□□□□□ -0.95
USP34-206ENST00000460004 GLRX3O76003 335 aaKnown RBP9.13□□□□□ -0.95
USP34-206ENST00000460004 ITGA6P23229 1130 aa9.13□□□□□ -0.95
USP34-206ENST00000460004 GTF2E1P29083 439 aaPredicted RBP9.13□□□□□ -0.95
USP34-206ENST00000460004 RFX5P48382 616 aaPredicted RBP9.13□□□□□ -0.95
USP34-206ENST00000460004 CCDC152Q4G0S7 254 aa9.13□□□□□ -0.95
USP34-206ENST00000460004 EPHA10Q5JZY3 1008 aa9.13□□□□□ -0.95
USP34-206ENST00000460004 VWA5B2Q8N398 1253 aa9.13□□□□□ -0.95
USP34-206ENST00000460004 COL25A1Q9BXS0 654 aaPredicted RBP9.13□□□□□ -0.95
USP34-206ENST00000460004 AKAP2Q9Y2D5 859 aa9.13□□□□□ -0.95
USP34-206ENST00000460004 NDUFB9Q9Y6M9 179 aa9.13□□□□□ -0.95
USP34-206ENST00000460004 TNS1Q9HBL0 1735 aaKnown RBP9.13□□□□□ -0.95
USP34-206ENST00000460004 EYA2O00167 538 aa9.12□□□□□ -0.95
USP34-206ENST00000460004 NTSR2O95665 410 aa9.12□□□□□ -0.95
USP34-206ENST00000460004 APBA3O96018 575 aa9.12□□□□□ -0.95
USP34-206ENST00000460004 TXNRD1Q16881 649 aa9.12□□□□□ -0.95
USP34-206ENST00000460004 SUSD4Q5VX71 490 aa9.12□□□□□ -0.95
USP34-206ENST00000460004 TPTE2Q6XPS3 522 aa9.12□□□□□ -0.95
USP34-206ENST00000460004 PRICKLE2Q7Z3G6 844 aa9.12□□□□□ -0.95
USP34-206ENST00000460004 NANOS1Q8WY41 292 aaKnown RBP9.12□□□□□ -0.95
USP34-206ENST00000460004 SIL1Q9H173 461 aa9.12□□□□□ -0.95
USP34-206ENST00000460004 IL1RAPL2Q9NP60 686 aa9.12□□□□□ -0.95
USP34-206ENST00000460004 ECHDC1Q9NTX5 307 aa9.12□□□□□ -0.95
USP34-206ENST00000460004 PA2G4Q9UQ80 394 aaKnown RBP9.12□□□□□ -0.95
USP34-206ENST00000460004 CARMIL3Q8ND23 1372 aa9.12□□□□□ -0.95
USP34-206ENST00000460004 DDX60Q8IY21 1712 aaKnown RBP9.11□□□□□ -0.95
USP34-206ENST00000460004 SASH1O94885 1247 aa9.11□□□□□ -0.95
USP34-206ENST00000460004 RHOQP17081 205 aa9.11□□□□□ -0.95
USP34-206ENST00000460004 SF3B2Q13435 895 aaKnown RBP9.11□□□□□ -0.95
USP34-206ENST00000460004 USPL1Q5W0Q7 1092 aa9.11□□□□□ -0.95
USP34-206ENST00000460004 LYSMD3Q7Z3D4 306 aa9.11□□□□□ -0.95
USP34-206ENST00000460004 AACSQ86V21 672 aa9.11□□□□□ -0.95
USP34-206ENST00000460004 TICAM2Q86XR7 235 aa9.11□□□□□ -0.95
USP34-206ENST00000460004 C16orf71Q8IYS4 520 aaPredicted RBP9.11□□□□□ -0.95
USP34-206ENST00000460004 CNTROBQ8N137 903 aa9.11□□□□□ -0.95
USP34-206ENST00000460004 TTLL11Q8NHH1 800 aa9.11□□□□□ -0.95
USP34-206ENST00000460004 JARID2Q92833 1246 aaPredicted RBP9.11□□□□□ -0.95
USP34-206ENST00000460004 CDC5LQ99459 802 aaKnown RBP9.11□□□□□ -0.95
USP34-206ENST00000460004 LRRC4BQ9NT99 713 aa9.11□□□□□ -0.95
USP34-206ENST00000460004 CEP126Q9P2H0 1117 aa9.11□□□□□ -0.95
USP34-206ENST00000460004 RGS17Q9UGC6 210 aaPredicted RBP9.11□□□□□ -0.95
USP34-206ENST00000460004 RIC1Q4ADV7 1423 aa9.11□□□□□ -0.95
USP34-206ENST00000460004 AK9Q5TCS8 1911 aa9.11□□□□□ -0.95
USP34-206ENST00000460004 TUBGCP6Q96RT7 1819 aa9.1□□□□□ -0.95
USP34-206ENST00000460004 MEN1O00255 615 aa9.1□□□□□ -0.95
USP34-206ENST00000460004 HIP1O00291 1037 aa9.1□□□□□ -0.95
USP34-206ENST00000460004 NPHP1O15259 732 aa9.1□□□□□ -0.95
USP34-206ENST00000460004 GSPT1P15170 499 aaKnown RBP9.1□□□□□ -0.95
USP34-206ENST00000460004 SCTRP47872 440 aa9.1□□□□□ -0.95
USP34-206ENST00000460004 KCNQ4P56696 695 aa9.1□□□□□ -0.95
USP34-206ENST00000460004 TNNI3KQ59H18 835 aa9.1□□□□□ -0.95
USP34-206ENST00000460004 RNFT1Q5M7Z0 435 aa9.1□□□□□ -0.95
USP34-206ENST00000460004 SLC10A5Q5PT55 438 aa9.1□□□□□ -0.95
USP34-206ENST00000460004 POTEAQ6S8J7 498 aa9.1□□□□□ -0.95
USP34-206ENST00000460004 LDHAL6AQ6ZMR3 332 aa9.1□□□□□ -0.95
USP34-206ENST00000460004 NBPF5PQ86XG9 351 aaPredicted RBP9.1□□□□□ -0.95
USP34-206ENST00000460004 BCL11AQ9H165 835 aa9.1□□□□□ -0.95
USP34-206ENST00000460004 FPGT-TNNI3KV9GXZ4 949 aa9.1□□□□□ -0.95
USP34-206ENST00000460004 ABCC12Q96J65 1359 aa9.1□□□□□ -0.95
USP34-206ENST00000460004 EP400Q96L91 3159 aa9.1□□□□□ -0.95
USP34-206ENST00000460004 LRP5O75197 1615 aa9.09□□□□□ -0.95
USP34-206ENST00000460004 MROH5Q6ZUA9 1318 aa9.09□□□□□ -0.95
USP34-206ENST00000460004 EPB41L2O43491 1005 aaKnown RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms