RNA–Protein interactions for RNA: ENST00000459741.5

TRAPPC10-204, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 5,826 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-204ENST00000459741 KRT9P35527 623 aa12.8□□□□□ -0.36
TRAPPC10-204ENST00000459741 SSH3Q8TE77 659 aa12.8□□□□□ -0.36
TRAPPC10-204ENST00000459741 UBLCP1Q8WVY7 318 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC10-204ENST00000459741 VPS16Q9H269 839 aa12.8□□□□□ -0.36
TRAPPC10-204ENST00000459741 STAP2Q9UGK3 403 aa12.8□□□□□ -0.36
TRAPPC10-204ENST00000459741 MTUS1Q9ULD2 1270 aa12.8□□□□□ -0.36
TRAPPC10-204ENST00000459741 PPP2R2CQ9Y2T4 447 aa12.8□□□□□ -0.36
TRAPPC10-204ENST00000459741 SYNMO15061 1565 aa12.8□□□□□ -0.36
TRAPPC10-204ENST00000459741 ACTN2P35609 894 aa12.79□□□□□ -0.36
TRAPPC10-204ENST00000459741 MAP2K2P36507 400 aa12.79□□□□□ -0.36
TRAPPC10-204ENST00000459741 TRAF1Q13077 416 aa12.79□□□□□ -0.36
TRAPPC10-204ENST00000459741 HEATR3Q7Z4Q2 680 aa12.79□□□□□ -0.36
TRAPPC10-204ENST00000459741 DSCC1Q9BVC3 393 aa12.79□□□□□ -0.36
TRAPPC10-204ENST00000459741 IQCGQ9H095 443 aaKnown RBP12.79□□□□□ -0.36
TRAPPC10-204ENST00000459741 TTC6Q86TZ1 520 aa12.79□□□□□ -0.36
TRAPPC10-204ENST00000459741 STIM2Q9P246 746 aa12.79□□□□□ -0.36
TRAPPC10-204ENST00000459741 PALD1Q9ULE6 856 aa12.79□□□□□ -0.36
TRAPPC10-204ENST00000459741 POLR2DO15514 142 aaKnown RBP12.79□□□□□ -0.36
TRAPPC10-204ENST00000459741 ATP11AP98196 1134 aa12.79□□□□□ -0.36
TRAPPC10-204ENST00000459741 CALCOCO2Q13137 446 aa12.79□□□□□ -0.36
TRAPPC10-204ENST00000459741 MTMR3Q13615 1198 aa12.79□□□□□ -0.36
TRAPPC10-204ENST00000459741 ZNF274Q96GC6 653 aaPredicted RBP12.79□□□□□ -0.36
TRAPPC10-204ENST00000459741 CEP83Q9Y592 693 aa12.79□□□□□ -0.36
TRAPPC10-204ENST00000459741 ADGBQ8N7X0 1667 aa12.79□□□□□ -0.36
TRAPPC10-204ENST00000459741 ADAMTS12P58397 1594 aa12.79□□□□□ -0.36
TRAPPC10-204ENST00000459741 ALDH3A1P30838 453 aa12.79□□□□□ -0.36
TRAPPC10-204ENST00000459741 NAPAP54920 295 aa12.79□□□□□ -0.36
TRAPPC10-204ENST00000459741 CEP128Q6ZU80 1094 aa12.79□□□□□ -0.36
TRAPPC10-204ENST00000459741 PPFIBP2Q8ND30 876 aa12.79□□□□□ -0.36
TRAPPC10-204ENST00000459741 SMC6Q96SB8 1091 aa12.79□□□□□ -0.36
TRAPPC10-204ENST00000459741 JAK2O60674 1132 aa12.79□□□□□ -0.36
TRAPPC10-204ENST00000459741 GNA11P29992 359 aa12.79□□□□□ -0.36
TRAPPC10-204ENST00000459741 CLNS1AP54105 237 aaKnown RBP12.79□□□□□ -0.36
TRAPPC10-204ENST00000459741 TRIML1Q8N9V2 468 aa12.79□□□□□ -0.36
TRAPPC10-204ENST00000459741 GOLGA8KD6RF30 607 aa12.78□□□□□ -0.36
TRAPPC10-204ENST00000459741 MCM7P33993 719 aa12.78□□□□□ -0.36
TRAPPC10-204ENST00000459741 MYSM1Q5VVJ2 828 aa12.78□□□□□ -0.36
TRAPPC10-204ENST00000459741 ZNF354CQ86Y25 554 aa12.78□□□□□ -0.36
TRAPPC10-204ENST00000459741 LMNTD2Q8IXW0 634 aa12.78□□□□□ -0.36
TRAPPC10-204ENST00000459741 NCOA5Q9HCD5 579 aaKnown RBP12.78□□□□□ -0.36
TRAPPC10-204ENST00000459741 TLDC2A0PJX2 215 aa12.78□□□□□ -0.36
TRAPPC10-204ENST00000459741 TSPY3P0CV98 308 aa12.78□□□□□ -0.36
TRAPPC10-204ENST00000459741 TSPY8P0CW00 308 aa12.78□□□□□ -0.36
TRAPPC10-204ENST00000459741 APPBP2Q92624 585 aa12.78□□□□□ -0.36
TRAPPC10-204ENST00000459741 CABS1Q96KC9 395 aa12.78□□□□□ -0.36
TRAPPC10-204ENST00000459741 TSNARE1Q96NA8 513 aa12.78□□□□□ -0.36
TRAPPC10-204ENST00000459741 CPSF2Q9P2I0 782 aaKnown RBP12.78□□□□□ -0.36
TRAPPC10-204ENST00000459741 MAGI2Q86UL8 1455 aa12.78□□□□□ -0.36
TRAPPC10-204ENST00000459741 VWA3AA6NCI4 1184 aa12.78□□□□□ -0.36
TRAPPC10-204ENST00000459741 ACTN4O43707 911 aaKnown RBP12.78□□□□□ -0.36
TRAPPC10-204ENST00000459741 CNNM4Q6P4Q7 775 aa12.78□□□□□ -0.36
TRAPPC10-204ENST00000459741 CCDC174Q6PII3 467 aa12.78□□□□□ -0.36
TRAPPC10-204ENST00000459741 TTC16Q8NEE8 873 aa12.78□□□□□ -0.36
TRAPPC10-204ENST00000459741 PPP1R14CQ8TAE6 165 aa12.78□□□□□ -0.36
TRAPPC10-204ENST00000459741 MYCBPQ99417 103 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC10-204ENST00000459741 PAIP2Q9BPZ3 127 aaKnown RBP12.78□□□□□ -0.36
TRAPPC10-204ENST00000459741 NKIRAS1Q9NYS0 192 aa12.78□□□□□ -0.36
TRAPPC10-204ENST00000459741 HDAC9Q9UKV0 1011 aa12.78□□□□□ -0.36
TRAPPC10-204ENST00000459741 PHLPP2Q6ZVD8 1323 aa12.78□□□□□ -0.36
TRAPPC10-204ENST00000459741 A0A1W2PQ27 194 aa12.78□□□□□ -0.36
TRAPPC10-204ENST00000459741 A0A1W2PQ64 194 aa12.78□□□□□ -0.36
TRAPPC10-204ENST00000459741 A0A1W2PQD8 194 aa12.78□□□□□ -0.36
TRAPPC10-204ENST00000459741 CLUL1Q15846 466 aa12.78□□□□□ -0.36
TRAPPC10-204ENST00000459741 DIS3L2Q8IYB7 885 aaKnown RBP12.78□□□□□ -0.36
TRAPPC10-204ENST00000459741 STX8Q9UNK0 236 aa12.78□□□□□ -0.36
TRAPPC10-204ENST00000459741 SAR1BQ9Y6B6 198 aa12.78□□□□□ -0.36
TRAPPC10-204ENST00000459741 MAGEB6P1A0A0J9YX57 407 aa12.77□□□□□ -0.36
TRAPPC10-204ENST00000459741 PFKFB2O60825 505 aa12.77□□□□□ -0.36
TRAPPC10-204ENST00000459741 CMA1P23946 247 aa12.77□□□□□ -0.36
TRAPPC10-204ENST00000459741 MRPS9P82933 396 aaKnown RBP12.77□□□□□ -0.36
TRAPPC10-204ENST00000459741 ZBTB16Q05516 673 aa12.77□□□□□ -0.36
TRAPPC10-204ENST00000459741 SND1Q7KZF4 910 aaKnown RBP eCLIP12.77□□□□□ -0.36
TRAPPC10-204ENST00000459741 TRPM2O94759 1503 aa12.77□□□□□ -0.36
TRAPPC10-204ENST00000459741 STX10O60499 249 aa12.77□□□□□ -0.36
TRAPPC10-204ENST00000459741 HPDP32754 393 aaPredicted RBP12.77□□□□□ -0.36
TRAPPC10-204ENST00000459741 KRT40Q6A162 431 aa12.77□□□□□ -0.36
TRAPPC10-204ENST00000459741 INTS8Q75QN2 995 aaKnown RBP12.77□□□□□ -0.36
TRAPPC10-204ENST00000459741 SREK1Q8WXA9 508 aaKnown RBP12.77□□□□□ -0.36
TRAPPC10-204ENST00000459741 USP19O94966 1318 aa12.77□□□□□ -0.37
TRAPPC10-204ENST00000459741 CFAP221Q4G0U5 840 aa12.77□□□□□ -0.37
TRAPPC10-204ENST00000459741 SBNO1A3KN83 1393 aa12.77□□□□□ -0.37
TRAPPC10-204ENST00000459741 SAMD9Q5K651 1589 aa12.77□□□□□ -0.37
TRAPPC10-204ENST00000459741 FERP16591 822 aa12.77□□□□□ -0.37
TRAPPC10-204ENST00000459741 ARID5AQ03989 594 aa12.77□□□□□ -0.37
TRAPPC10-204ENST00000459741 NBPF6Q5VWK0 638 aa12.77□□□□□ -0.37
TRAPPC10-204ENST00000459741 NBPF5PQ86XG9 351 aaPredicted RBP12.77□□□□□ -0.37
TRAPPC10-204ENST00000459741 NBPF4Q96M43 638 aa12.77□□□□□ -0.37
TRAPPC10-204ENST00000459741 NAP1L4Q99733 375 aaKnown RBP12.77□□□□□ -0.37
TRAPPC10-204ENST00000459741 UHRF1BP1LA0JNW5 1464 aa12.77□□□□□ -0.37
TRAPPC10-204ENST00000459741 EYA2O00167 538 aa12.77□□□□□ -0.37
TRAPPC10-204ENST00000459741 CD2BP2O95400 341 aaKnown RBP12.76□□□□□ -0.37
TRAPPC10-204ENST00000459741 ATP5JP18859 108 aa12.76□□□□□ -0.37
TRAPPC10-204ENST00000459741 SV2BQ7L1I2 683 aa12.76□□□□□ -0.37
TRAPPC10-204ENST00000459741 PPP1R13BQ96KQ4 1090 aa12.76□□□□□ -0.37
TRAPPC10-204ENST00000459741 ABCC10Q5T3U5 1492 aa12.76□□□□□ -0.37
TRAPPC10-204ENST00000459741 PFKFB1P16118 471 aa12.76□□□□□ -0.37
TRAPPC10-204ENST00000459741 RPL13P26373 211 aaKnown RBP12.76□□□□□ -0.37
TRAPPC10-204ENST00000459741 KRT28Q7Z3Y7 464 aa12.76□□□□□ -0.37
TRAPPC10-204ENST00000459741 CSGALNACT2Q8N6G5 542 aa12.76□□□□□ -0.37
TRAPPC10-204ENST00000459741 NUCKS1Q9H1E3 243 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms