RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 C19orf44Q9H6X5 657 aa13.67□□□□□ -0.22
SYNE2-207ENST00000458046 PRKAG2Q9UGJ0 569 aa13.67□□□□□ -0.22
SYNE2-207ENST00000458046 SIPA1L3O60292 1781 aaPredicted RBP13.66□□□□□ -0.22
SYNE2-207ENST00000458046 RGPD5Q99666 1765 aa13.66□□□□□ -0.22
SYNE2-207ENST00000458046 TDO2P48775 406 aa13.66□□□□□ -0.22
SYNE2-207ENST00000458046 JDP2Q8WYK2 163 aa13.66□□□□□ -0.22
SYNE2-207ENST00000458046 TINF2Q9BSI4 451 aa13.66□□□□□ -0.22
SYNE2-207ENST00000458046 ZSWIM4Q9H7M6 989 aa13.66□□□□□ -0.22
SYNE2-207ENST00000458046 NCOA5Q9HCD5 579 aaKnown RBP13.66□□□□□ -0.22
SYNE2-207ENST00000458046 PAG1Q9NWQ8 432 aa13.66□□□□□ -0.22
SYNE2-207ENST00000458046 C5P01031 1676 aa13.66□□□□□ -0.22
SYNE2-207ENST00000458046 NBPF26B4DH59 902 aa13.66□□□□□ -0.22
SYNE2-207ENST00000458046 ZNF165P49910 485 aa13.66□□□□□ -0.22
SYNE2-207ENST00000458046 GUCY1B3Q02153 619 aa13.66□□□□□ -0.22
SYNE2-207ENST00000458046 LRMPQ12912 555 aa13.66□□□□□ -0.22
SYNE2-207ENST00000458046 DHX8Q14562 1220 aaKnown RBP13.66□□□□□ -0.22
SYNE2-207ENST00000458046 NBPF10Q6P3W6 841 aaKnown RBP13.66□□□□□ -0.22
SYNE2-207ENST00000458046 GIGYF2Q6Y7W6 1299 aaKnown RBP13.66□□□□□ -0.22
SYNE2-207ENST00000458046 ATG9AQ7Z3C6 839 aa13.66□□□□□ -0.22
SYNE2-207ENST00000458046 ANKRD23Q86SG2 305 aa13.66□□□□□ -0.22
SYNE2-207ENST00000458046 NBPF15Q8N660 670 aa13.66□□□□□ -0.22
SYNE2-207ENST00000458046 SLC39A13Q96H72 371 aa13.66□□□□□ -0.22
SYNE2-207ENST00000458046 DDX56Q9NY93 547 aaKnown RBP13.66□□□□□ -0.22
SYNE2-207ENST00000458046 WDR90Q96KV7 1748 aa13.66□□□□□ -0.22
SYNE2-207ENST00000458046 C1orf167Q5SNV9 1468 aa13.65□□□□□ -0.22
SYNE2-207ENST00000458046 NWD2Q9ULI1 1742 aa13.65□□□□□ -0.22
SYNE2-207ENST00000458046 HMGN5P82970 282 aaKnown RBP13.65□□□□□ -0.22
SYNE2-207ENST00000458046 LRRC24Q50LG9 513 aa13.65□□□□□ -0.22
SYNE2-207ENST00000458046 BRINP3Q76B58 766 aa13.65□□□□□ -0.22
SYNE2-207ENST00000458046 DHX32Q7L7V1 743 aaKnown RBP13.65□□□□□ -0.22
SYNE2-207ENST00000458046 RAVER1Q8IY67 606 aaKnown RBP13.65□□□□□ -0.22
SYNE2-207ENST00000458046 TMC2Q8TDI7 906 aa13.65□□□□□ -0.22
SYNE2-207ENST00000458046 TBC1D2BQ9UPU7 963 aa13.65□□□□□ -0.22
SYNE2-207ENST00000458046 MRC1P22897 1456 aa13.65□□□□□ -0.22
SYNE2-207ENST00000458046 CTDNEP1O95476 244 aa13.65□□□□□ -0.22
SYNE2-207ENST00000458046 A1BGP04217 495 aa13.65□□□□□ -0.22
SYNE2-207ENST00000458046 TPM3P06753 285 aa13.65□□□□□ -0.22
SYNE2-207ENST00000458046 NSUN7Q8NE18 718 aaKnown RBP13.65□□□□□ -0.22
SYNE2-207ENST00000458046 ZSCAN16Q9H4T2 348 aaPredicted RBP13.65□□□□□ -0.22
SYNE2-207ENST00000458046 ZBTB3Q9H5J0 574 aa13.65□□□□□ -0.22
SYNE2-207ENST00000458046 CFAP45Q9UL16 551 aa13.65□□□□□ -0.22
SYNE2-207ENST00000458046 PFKFB2O60825 505 aa13.64□□□□□ -0.23
SYNE2-207ENST00000458046 PDILTQ8N807 584 aa13.64□□□□□ -0.23
SYNE2-207ENST00000458046 A0A087WWV3 80 aa13.64□□□□□ -0.23
SYNE2-207ENST00000458046 PTPDC1A2A3K4 754 aa13.64□□□□□ -0.23
SYNE2-207ENST00000458046 H7C1W4 665 aa13.64□□□□□ -0.23
SYNE2-207ENST00000458046 S100BP04271 92 aaPredicted RBP13.64□□□□□ -0.23
SYNE2-207ENST00000458046 MTA1Q13330 715 aa13.64□□□□□ -0.23
SYNE2-207ENST00000458046 RBM43Q6ZSC3 357 aaKnown RBP13.64□□□□□ -0.23
SYNE2-207ENST00000458046 SMARCC2Q8TAQ2 1214 aa13.64□□□□□ -0.23
SYNE2-207ENST00000458046 ATF3P18847 181 aa13.63□□□□□ -0.23
SYNE2-207ENST00000458046 ADD1P35611 737 aaKnown RBP13.63□□□□□ -0.23
SYNE2-207ENST00000458046 ZNF75DP51815 510 aa13.63□□□□□ -0.23
SYNE2-207ENST00000458046 MARSP56192 900 aaKnown RBP13.63□□□□□ -0.23
SYNE2-207ENST00000458046 TTLL5Q6EMB2 1281 aa13.63□□□□□ -0.23
SYNE2-207ENST00000458046 ZNF710Q8N1W2 664 aa13.63□□□□□ -0.23
SYNE2-207ENST00000458046 FEZ2Q9UHY8 353 aaPredicted RBP13.63□□□□□ -0.23
SYNE2-207ENST00000458046 TTF2Q9UNY4 1162 aaKnown RBP13.63□□□□□ -0.23
SYNE2-207ENST00000458046 E7EWF7 191 aa13.63□□□□□ -0.23
SYNE2-207ENST00000458046 IFIT1P09914 478 aaKnown RBP13.63□□□□□ -0.23
SYNE2-207ENST00000458046 HSPD1P10809 573 aaKnown RBP13.63□□□□□ -0.23
SYNE2-207ENST00000458046 FILIP1Q7Z7B0 1213 aa13.63□□□□□ -0.23
SYNE2-207ENST00000458046 PUS3Q9BZE2 481 aaKnown RBP13.63□□□□□ -0.23
SYNE2-207ENST00000458046 CHST12Q9NRB3 414 aa13.63□□□□□ -0.23
SYNE2-207ENST00000458046 CWC25Q9NXE8 425 aaPredicted RBP13.63□□□□□ -0.23
SYNE2-207ENST00000458046 KIF3AQ9Y496 699 aa13.63□□□□□ -0.23
SYNE2-207ENST00000458046 TGFB3P10600 412 aa13.62□□□□□ -0.23
SYNE2-207ENST00000458046 ABL2P42684 1182 aa13.62□□□□□ -0.23
SYNE2-207ENST00000458046 USP5P45974 858 aa13.62□□□□□ -0.23
SYNE2-207ENST00000458046 EXOSC10Q01780 885 aaKnown RBP13.62□□□□□ -0.23
SYNE2-207ENST00000458046 MUC3BQ9H195 1237 aa13.62□□□□□ -0.23
SYNE2-207ENST00000458046 HELLSQ9NRZ9 838 aa13.62□□□□□ -0.23
SYNE2-207ENST00000458046 SH3TC1Q8TE82 1336 aa13.62□□□□□ -0.23
SYNE2-207ENST00000458046 ADAMTS7Q9UKP4 1686 aa13.62□□□□□ -0.23
SYNE2-207ENST00000458046 FAM200BP0CF97 657 aa13.62□□□□□ -0.23
SYNE2-207ENST00000458046 FKBP4Q02790 459 aaKnown RBP eCLIP13.62□□□□□ -0.23
SYNE2-207ENST00000458046 MTERF4Q7Z6M4 381 aaKnown RBP13.62□□□□□ -0.23
SYNE2-207ENST00000458046 PCGF5Q86SE9 256 aa13.62□□□□□ -0.23
SYNE2-207ENST00000458046 TDRD7Q8NHU6 1098 aaKnown RBP13.62□□□□□ -0.23
SYNE2-207ENST00000458046 USP28Q96RU2 1077 aa13.62□□□□□ -0.23
SYNE2-207ENST00000458046 RSPH9Q9H1X1 276 aaPredicted RBP13.62□□□□□ -0.23
SYNE2-207ENST00000458046 GOLPH3LQ9H4A5 285 aa13.62□□□□□ -0.23
SYNE2-207ENST00000458046 GPHNQ9NQX3 736 aaPredicted RBP13.62□□□□□ -0.23
SYNE2-207ENST00000458046 A0A1B0GUL7 405 aa13.61□□□□□ -0.23
SYNE2-207ENST00000458046 ENOX2Q16206 610 aaKnown RBP13.61□□□□□ -0.23
SYNE2-207ENST00000458046 ZMYM1Q5SVZ6 1142 aa13.61□□□□□ -0.23
SYNE2-207ENST00000458046 KRT27Q7Z3Y8 459 aa13.61□□□□□ -0.23
SYNE2-207ENST00000458046 PLA2G4DQ86XP0 818 aa13.61□□□□□ -0.23
SYNE2-207ENST00000458046 MTMR14Q8NCE2 650 aa13.61□□□□□ -0.23
SYNE2-207ENST00000458046 ERCC4Q92889 916 aaPredicted RBP13.61□□□□□ -0.23
SYNE2-207ENST00000458046 CEP63Q96MT8 703 aa13.61□□□□□ -0.23
SYNE2-207ENST00000458046 LLPHQ9BRT6 129 aaKnown RBP13.61□□□□□ -0.23
SYNE2-207ENST00000458046 CEP126Q9P2H0 1117 aa13.61□□□□□ -0.23
SYNE2-207ENST00000458046 ATG7O95352 703 aa13.61□□□□□ -0.23
SYNE2-207ENST00000458046 CD53P19397 219 aa13.61□□□□□ -0.23
SYNE2-207ENST00000458046 IL15P40933 162 aaPredicted RBP13.61□□□□□ -0.23
SYNE2-207ENST00000458046 C1QTNF12Q5T7M4 302 aa13.61□□□□□ -0.23
SYNE2-207ENST00000458046 C11orf57Q6ZUT1 292 aaPredicted RBP13.61□□□□□ -0.23
SYNE2-207ENST00000458046 DSCC1Q9BVC3 393 aa13.61□□□□□ -0.23
SYNE2-207ENST00000458046 TRIM34Q9BYJ4 488 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms