RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 ZSCAN29Q8IWY8 852 aaPredicted RBP26.64■■□□□ 1.86
CPNE1-220ENST00000458038 ZFPM1Q8IX07 1006 aa26.64■■□□□ 1.86
CPNE1-220ENST00000458038 SCYL3Q8IZE3 742 aa26.64■■□□□ 1.86
CPNE1-220ENST00000458038 ATRNL1Q5VV63 1379 aa26.63■■□□□ 1.85
CPNE1-220ENST00000458038 MAP4K4O95819 1239 aaPredicted RBP26.63■■□□□ 1.85
CPNE1-220ENST00000458038 XAGE2Q96GT9 111 aa26.63■■□□□ 1.85
CPNE1-220ENST00000458038 NPM3O75607 178 aaKnown RBP26.62■■□□□ 1.85
CPNE1-220ENST00000458038 ERICH6Q7L0X2 663 aa26.62■■□□□ 1.85
CPNE1-220ENST00000458038 SH3TC2Q8TF17 1288 aa26.62■■□□□ 1.85
CPNE1-220ENST00000458038 TRIM47Q96LD4 638 aa26.62■■□□□ 1.85
CPNE1-220ENST00000458038 ZHX2Q9Y6X8 837 aa26.62■■□□□ 1.85
CPNE1-220ENST00000458038 ZSWIM8A7E2V4 1837 aa26.62■■□□□ 1.85
CPNE1-220ENST00000458038 RFX7Q2KHR2 1363 aa26.61■■□□□ 1.85
CPNE1-220ENST00000458038 CTNND1O60716 968 aaKnown RBP26.61■■□□□ 1.85
CPNE1-220ENST00000458038 FMNL1O95466 1100 aaPredicted RBP26.61■■□□□ 1.85
CPNE1-220ENST00000458038 PTPRAP18433 802 aa26.61■■□□□ 1.85
CPNE1-220ENST00000458038 TFCP2Q12800 502 aa26.61■■□□□ 1.85
CPNE1-220ENST00000458038 SLC45A1Q9Y2W3 748 aa26.61■■□□□ 1.85
CPNE1-220ENST00000458038 MROH7-TTC4A0A0A0MT08 1334 aa26.61■■□□□ 1.85
CPNE1-220ENST00000458038 A0A0G2JLL6 359 aaPredicted RBP26.6■■□□□ 1.85
CPNE1-220ENST00000458038 LDHCP07864 332 aa26.6■■□□□ 1.85
CPNE1-220ENST00000458038 HABP4Q5JVS0 413 aaKnown RBP26.6■■□□□ 1.85
CPNE1-220ENST00000458038 GPAT2Q6NUI2 795 aa26.6■■□□□ 1.85
CPNE1-220ENST00000458038 PRRT2Q7Z6L0 340 aaPredicted RBP26.6■■□□□ 1.85
CPNE1-220ENST00000458038 RAET1EQ8TD07 263 aa26.6■■□□□ 1.85
CPNE1-220ENST00000458038 AFG3L2Q9Y4W6 797 aa26.6■■□□□ 1.85
CPNE1-220ENST00000458038 GPR75-ASB3A0A0A6YYF3 556 aa26.59■■□□□ 1.85
CPNE1-220ENST00000458038 BCRP11274 1271 aa26.59■■□□□ 1.85
CPNE1-220ENST00000458038 OSBPP22059 807 aa26.59■■□□□ 1.85
CPNE1-220ENST00000458038 BTDP43251 543 aa26.59■■□□□ 1.85
CPNE1-220ENST00000458038 GSTO1P78417 241 aa26.59■■□□□ 1.85
CPNE1-220ENST00000458038 GORABQ5T7V8 394 aa26.59■■□□□ 1.85
CPNE1-220ENST00000458038 NKX2-3Q8TAU0 364 aa26.59■■□□□ 1.85
CPNE1-220ENST00000458038 TBC1D12O60347 775 aa26.58■■□□□ 1.85
CPNE1-220ENST00000458038 GNAI2P04899 355 aa26.58■■□□□ 1.85
CPNE1-220ENST00000458038 GRK4P32298 578 aa26.58■■□□□ 1.85
CPNE1-220ENST00000458038 FCGRTP55899 365 aa26.58■■□□□ 1.85
CPNE1-220ENST00000458038 MECOMQ03112 1051 aa26.58■■□□□ 1.85
CPNE1-220ENST00000458038 SH3BP5LQ7L8J4 393 aa26.58■■□□□ 1.85
CPNE1-220ENST00000458038 NEUROD6Q96NK8 337 aa26.58■■□□□ 1.85
CPNE1-220ENST00000458038 DDTLA6NHG4 134 aaPredicted RBP26.57■■□□□ 1.84
CPNE1-220ENST00000458038 CTGFP29279 349 aa26.57■■□□□ 1.84
CPNE1-220ENST00000458038 MYPNQ86TC9 1320 aa26.57■■□□□ 1.84
CPNE1-220ENST00000458038 MGAMO43451 1857 aa26.57■■□□□ 1.84
CPNE1-220ENST00000458038 DOCK1Q14185 1865 aa26.56■■□□□ 1.84
CPNE1-220ENST00000458038 MYCP01106 439 aaPredicted RBP26.56■■□□□ 1.84
CPNE1-220ENST00000458038 ATF7IPQ6VMQ6 1270 aa26.56■■□□□ 1.84
CPNE1-220ENST00000458038 SPATA5Q8NB90 893 aa26.56■■□□□ 1.84
CPNE1-220ENST00000458038 DDX4Q9NQI0 724 aaKnown RBP26.56■■□□□ 1.84
CPNE1-220ENST00000458038 PTPRFP10586 1907 aa26.56■■□□□ 1.84
CPNE1-220ENST00000458038 RHBDL3P58872 404 aa26.55■■□□□ 1.84
CPNE1-220ENST00000458038 G3BP1Q13283 466 aaKnown RBP eCLIP26.55■■□□□ 1.847e-8■□□□□ 11.2
CPNE1-220ENST00000458038 PICALMQ13492 652 aa26.55■■□□□ 1.84
CPNE1-220ENST00000458038 HMG20BQ9P0W2 317 aa26.55■■□□□ 1.84
CPNE1-220ENST00000458038 CYP2C8P10632 490 aa26.54■■□□□ 1.84
CPNE1-220ENST00000458038 TRIM27P14373 513 aa26.54■■□□□ 1.84
CPNE1-220ENST00000458038 ARID4AP29374 1257 aaPredicted RBP26.54■■□□□ 1.84
CPNE1-220ENST00000458038 UBXN2AP68543 259 aa26.54■■□□□ 1.84
CPNE1-220ENST00000458038 GADL1Q6ZQY3 521 aa26.54■■□□□ 1.84
CPNE1-220ENST00000458038 PHIPQ8WWQ0 1821 aa26.53■■□□□ 1.84
CPNE1-220ENST00000458038 UQCRFS1P1P0C7P4 283 aa26.53■■□□□ 1.84
CPNE1-220ENST00000458038 SLAIN1Q8ND83 568 aa26.53■■□□□ 1.84
CPNE1-220ENST00000458038 NSUN4Q96CB9 384 aaKnown RBP26.53■■□□□ 1.84
CPNE1-220ENST00000458038 TBC1D2Q9BYX2 928 aa26.53■■□□□ 1.84
CPNE1-220ENST00000458038 OSBPL5Q9H0X9 879 aaPredicted RBP26.53■■□□□ 1.84
CPNE1-220ENST00000458038 COL2A1P02458 1487 aaPredicted RBP26.53■■□□□ 1.84
CPNE1-220ENST00000458038 GJB1P08034 283 aa26.52■■□□□ 1.84
CPNE1-220ENST00000458038 CAPN2P17655 700 aa26.52■■□□□ 1.84
CPNE1-220ENST00000458038 MTFR1Q15390 333 aa26.52■■□□□ 1.84
CPNE1-220ENST00000458038 BIN2Q9UBW5 565 aaPredicted RBP26.52■■□□□ 1.84
CPNE1-220ENST00000458038 ECM2O94769 699 aaPredicted RBP26.51■■□□□ 1.83
CPNE1-220ENST00000458038 SMCR8Q8TEV9 937 aaPredicted RBP26.51■■□□□ 1.83
CPNE1-220ENST00000458038 ZNF384Q8TF68 577 aa26.51■■□□□ 1.83
CPNE1-220ENST00000458038 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.51■■□□□ 1.839e-8■■■■■ 116.8
CPNE1-220ENST00000458038 IGSF3O75054 1194 aa26.5■■□□□ 1.83
CPNE1-220ENST00000458038 GJA8P48165 433 aa26.5■■□□□ 1.83
CPNE1-220ENST00000458038 PRKCZQ05513 592 aa26.5■■□□□ 1.83
CPNE1-220ENST00000458038 FRAT1Q92837 279 aaPredicted RBP26.5■■□□□ 1.83
CPNE1-220ENST00000458038 RAI14Q9P0K7 980 aa26.5■■□□□ 1.83
CPNE1-220ENST00000458038 PNMA3Q9UL41 463 aa26.5■■□□□ 1.83
CPNE1-220ENST00000458038 AGTPBP1Q9UPW5 1226 aa26.5■■□□□ 1.83
CPNE1-220ENST00000458038 TRIM75PA6NK02 468 aa26.49■■□□□ 1.83
CPNE1-220ENST00000458038 CCL5P13501 91 aa26.49■■□□□ 1.83
CPNE1-220ENST00000458038 PROCA1Q8NCQ7 364 aaPredicted RBP26.49■■□□□ 1.83
CPNE1-220ENST00000458038 NOL10Q9BSC4 688 aaKnown RBP26.49■■□□□ 1.83
CPNE1-220ENST00000458038 RNF208Q9H0X6 261 aa26.49■■□□□ 1.83
CPNE1-220ENST00000458038 GPR108Q9NPR9 543 aa26.49■■□□□ 1.83
CPNE1-220ENST00000458038 LRP2BPQ9P2M1 347 aa26.49■■□□□ 1.83
CPNE1-220ENST00000458038 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.49■■□□□ 1.83
CPNE1-220ENST00000458038 TBC1D9Q6ZT07 1266 aa26.48■■□□□ 1.83
CPNE1-220ENST00000458038 HERC5Q9UII4 1024 aaKnown RBP26.48■■□□□ 1.83
CPNE1-220ENST00000458038 PNMA6EA0A0J9YXQ4 647 aa26.47■■□□□ 1.83
CPNE1-220ENST00000458038 BCAR3O75815 825 aa26.47■■□□□ 1.83
CPNE1-220ENST00000458038 PLCG2P16885 1265 aa26.47■■□□□ 1.83
CPNE1-220ENST00000458038 IRF5Q13568 498 aa26.47■■□□□ 1.83
CPNE1-220ENST00000458038 PI16Q6UXB8 463 aa26.47■■□□□ 1.83
CPNE1-220ENST00000458038 PXYLP1Q8TE99 480 aa26.47■■□□□ 1.83
CPNE1-220ENST00000458038 SHISA4Q96DD7 197 aa26.47■■□□□ 1.83
CPNE1-220ENST00000458038 DOCK3Q8IZD9 2030 aa26.46■■□□□ 1.83
CPNE1-220ENST00000458038 BAG3O95817 575 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms