RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 TRMT44Q8IYL2 757 aaKnown RBP22■■□□□ 1.11
SNX27-204ENST00000458013 CCT6BQ92526 530 aa22■■□□□ 1.11
SNX27-204ENST00000458013 RIOK3O14730 519 aaKnown RBP22■■□□□ 1.11
SNX27-204ENST00000458013 TEX11Q8IYF3 940 aa22■■□□□ 1.11
SNX27-204ENST00000458013 KCNJ14Q9UNX9 436 aa22■■□□□ 1.11
SNX27-204ENST00000458013 RTCBQ9Y3I0 505 aaKnown RBP22■■□□□ 1.11
SNX27-204ENST00000458013 GNPATO15228 680 aa22■■□□□ 1.11
SNX27-204ENST00000458013 DAPK3O43293 454 aa22■■□□□ 1.11
SNX27-204ENST00000458013 TBC1D8BQ0IIM8 1120 aa22■■□□□ 1.11
SNX27-204ENST00000458013 ARHGAP45Q92619 1136 aa22■■□□□ 1.11
SNX27-204ENST00000458013 NYXQ9GZU5 481 aa22■■□□□ 1.11
SNX27-204ENST00000458013 ITGA6P23229 1130 aa21.99■■□□□ 1.11
SNX27-204ENST00000458013 GKAP1Q5VSY0 366 aaPredicted RBP21.99■■□□□ 1.11
SNX27-204ENST00000458013 IQUBQ8NA54 791 aa21.99■■□□□ 1.11
SNX27-204ENST00000458013 MYL5Q02045 173 aa21.99■■□□□ 1.11
SNX27-204ENST00000458013 MTUS1Q9ULD2 1270 aa21.99■■□□□ 1.11
SNX27-204ENST00000458013 CIB2O75838 187 aa21.99■■□□□ 1.11
SNX27-204ENST00000458013 UFL1O94874 794 aa21.99■■□□□ 1.11
SNX27-204ENST00000458013 RBM28Q9NW13 759 aaKnown RBP21.99■■□□□ 1.11
SNX27-204ENST00000458013 GNA11P29992 359 aa21.99■■□□□ 1.11
SNX27-204ENST00000458013 INF2Q27J81 1249 aa21.99■■□□□ 1.11
SNX27-204ENST00000458013 HINFPQ9BQA5 517 aa21.99■■□□□ 1.11
SNX27-204ENST00000458013 TTC41PQ6P2S7 1318 aa21.99■■□□□ 1.11
SNX27-204ENST00000458013 STMN2Q93045 179 aa21.99■■□□□ 1.11
SNX27-204ENST00000458013 NAPGQ99747 312 aaPredicted RBP21.98■■□□□ 1.11
SNX27-204ENST00000458013 FAM204AQ9H8W3 233 aa21.98■■□□□ 1.11
SNX27-204ENST00000458013 C8orf74Q6P047 294 aa21.98■■□□□ 1.11
SNX27-204ENST00000458013 UTP11Q9Y3A2 253 aaKnown RBP21.98■■□□□ 1.11
SNX27-204ENST00000458013 RALGAPBQ86X10 1494 aa21.98■■□□□ 1.11
SNX27-204ENST00000458013 BRAPQ7Z569 592 aa21.97■■□□□ 1.11
SNX27-204ENST00000458013 A0A1B0GUL7 405 aa21.97■■□□□ 1.11
SNX27-204ENST00000458013 VAMP4O75379 141 aa21.97■■□□□ 1.11
SNX27-204ENST00000458013 NKIRAS1Q9NYS0 192 aa21.97■■□□□ 1.11
SNX27-204ENST00000458013 POLKQ9UBT6 870 aa21.97■■□□□ 1.11
SNX27-204ENST00000458013 TTC36A6NLP5 189 aa21.97■■□□□ 1.11
SNX27-204ENST00000458013 KRT19P08727 400 aa21.97■■□□□ 1.11
SNX27-204ENST00000458013 IL2RBP14784 551 aa21.97■■□□□ 1.11
SNX27-204ENST00000458013 TRIM6Q9C030 488 aaPredicted RBP21.97■■□□□ 1.11
SNX27-204ENST00000458013 RDH13Q8NBN7 331 aa21.97■■□□□ 1.11
SNX27-204ENST00000458013 SNX14Q9Y5W7 946 aa21.97■■□□□ 1.11
SNX27-204ENST00000458013 MAP3K5Q99683 1374 aa21.97■■□□□ 1.11
SNX27-204ENST00000458013 VPS52Q8N1B4 723 aa21.96■■□□□ 1.11
SNX27-204ENST00000458013 CBX8Q9HC52 389 aa21.96■■□□□ 1.11
SNX27-204ENST00000458013 FANCCQ00597 558 aa21.96■■□□□ 1.11
SNX27-204ENST00000458013 TPTE2Q6XPS3 522 aa21.96■■□□□ 1.11
SNX27-204ENST00000458013 CNGA4Q8IV77 575 aa21.96■■□□□ 1.11
SNX27-204ENST00000458013 CCDC26Q8TAB7 109 aa21.96■■□□□ 1.11
SNX27-204ENST00000458013 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.96■■□□□ 1.11
SNX27-204ENST00000458013 PNOCQ13519 176 aa21.96■■□□□ 1.11
SNX27-204ENST00000458013 KCNH3Q9ULD8 1083 aa21.96■■□□□ 1.11
SNX27-204ENST00000458013 MTX1Q13505 466 aa21.95■■□□□ 1.1
SNX27-204ENST00000458013 COBLO75128 1261 aa21.95■■□□□ 1.1
SNX27-204ENST00000458013 FAM47AQ5JRC9 791 aa21.95■■□□□ 1.1
SNX27-204ENST00000458013 CYP26C1Q6V0L0 522 aa21.95■■□□□ 1.1
SNX27-204ENST00000458013 CSGALNACT2Q8N6G5 542 aa21.95■■□□□ 1.1
SNX27-204ENST00000458013 ARHGEF2Q92974 986 aaKnown RBP21.95■■□□□ 1.1
SNX27-204ENST00000458013 XAGE2Q96GT9 111 aa21.95■■□□□ 1.1
SNX27-204ENST00000458013 DCTPP1Q9H773 170 aa21.95■■□□□ 1.1
SNX27-204ENST00000458013 RBM17Q96I25 401 aaKnown RBP21.95■■□□□ 1.1
SNX27-204ENST00000458013 PPP1R12CQ9BZL4 782 aa21.95■■□□□ 1.1
SNX27-204ENST00000458013 WDR7Q9Y4E6 1490 aa21.95■■□□□ 1.1
SNX27-204ENST00000458013 ANO1Q5XXA6 986 aa21.95■■□□□ 1.1
SNX27-204ENST00000458013 CDC37L1Q7L3B6 337 aa21.95■■□□□ 1.1
SNX27-204ENST00000458013 TAB3Q8N5C8 712 aaPredicted RBP21.95■■□□□ 1.1
SNX27-204ENST00000458013 RNMTO43148 476 aaKnown RBP21.95■■□□□ 1.1
SNX27-204ENST00000458013 OGFRQ9NZT2 677 aa21.95■■□□□ 1.1
SNX27-204ENST00000458013 MSANTD4Q8NCY6 345 aa21.94■■□□□ 1.1
SNX27-204ENST00000458013 CALUO43852 315 aaPredicted RBP21.94■■□□□ 1.1
SNX27-204ENST00000458013 ATP11AP98196 1134 aa21.94■■□□□ 1.1
SNX27-204ENST00000458013 TRPC3Q13507 836 aa21.94■■□□□ 1.1
SNX27-204ENST00000458013 CCDC14Q49A88 953 aa21.94■■□□□ 1.1
SNX27-204ENST00000458013 BSPRYQ5W0U4 402 aa21.94■■□□□ 1.1
SNX27-204ENST00000458013 KIFAP3Q92845 792 aa21.94■■□□□ 1.1
SNX27-204ENST00000458013 DBNDD2Q9BQY9 259 aa21.94■■□□□ 1.1
SNX27-204ENST00000458013 STX10O60499 249 aa21.94■■□□□ 1.1
SNX27-204ENST00000458013 GAS8O95995 478 aa21.94■■□□□ 1.1
SNX27-204ENST00000458013 LACTBP83111 547 aaPredicted RBP21.94■■□□□ 1.1
SNX27-204ENST00000458013 RRAGDQ9NQL2 400 aaPredicted RBP21.94■■□□□ 1.1
SNX27-204ENST00000458013 BUB1BO60566 1050 aaPredicted RBP21.94■■□□□ 1.1
SNX27-204ENST00000458013 ARHGAP44Q17R89 818 aa21.94■■□□□ 1.1
SNX27-204ENST00000458013 SMC5Q8IY18 1101 aa21.94■■□□□ 1.1
SNX27-204ENST00000458013 CCDC110Q8TBZ0 833 aa21.94■■□□□ 1.1
SNX27-204ENST00000458013 UBAP1LF5GYI3 381 aa21.94■■□□□ 1.1
SNX27-204ENST00000458013 FANCAO15360 1455 aa21.93■■□□□ 1.1
SNX27-204ENST00000458013 ITIH3Q06033 890 aa21.93■■□□□ 1.1
SNX27-204ENST00000458013 CASC4Q6P4E1 433 aa21.93■■□□□ 1.1
SNX27-204ENST00000458013 GBP6Q6ZN66 633 aa21.93■■□□□ 1.1
SNX27-204ENST00000458013 CEP104O60308 925 aa21.93■■□□□ 1.1
SNX27-204ENST00000458013 TNNI3KQ59H18 835 aa21.93■■□□□ 1.1
SNX27-204ENST00000458013 FPGT-TNNI3KV9GXZ4 949 aa21.93■■□□□ 1.1
SNX27-204ENST00000458013 GCNT3O95395 438 aa21.93■■□□□ 1.1
SNX27-204ENST00000458013 EYA1Q99502 592 aa21.93■■□□□ 1.1
SNX27-204ENST00000458013 GTPBP4Q9BZE4 634 aaKnown RBP21.93■■□□□ 1.1
SNX27-204ENST00000458013 JAK2O60674 1132 aa21.93■■□□□ 1.1
SNX27-204ENST00000458013 CPXCR1Q8N123 301 aa21.93■■□□□ 1.1
SNX27-204ENST00000458013 MYCT1Q8N699 235 aa21.93■■□□□ 1.1
SNX27-204ENST00000458013 STIM2Q9P246 746 aa21.93■■□□□ 1.1
SNX27-204ENST00000458013 HELLSQ9NRZ9 838 aa21.93■■□□□ 1.1
SNX27-204ENST00000458013 CLGNO14967 610 aa21.92■■□□□ 1.1
SNX27-204ENST00000458013 SLF1Q9BQI6 1058 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms