RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 OSBP2Q969R2 916 aa17.05■□□□□ 0.32
SMPD4-215ENST00000457039 OSBPL5Q9H0X9 879 aaPredicted RBP17.05■□□□□ 0.32
SMPD4-215ENST00000457039 GBA2Q9HCG7 927 aaPredicted RBP17.05■□□□□ 0.32
SMPD4-215ENST00000457039 PAPPA2Q9BXP8 1791 aa17.05■□□□□ 0.32
SMPD4-215ENST00000457039 MBD4O95243 580 aa17.04■□□□□ 0.32
SMPD4-215ENST00000457039 ZMYM1Q5SVZ6 1142 aa17.04■□□□□ 0.32
SMPD4-215ENST00000457039 RILPL2Q969X0 211 aa17.04■□□□□ 0.32
SMPD4-215ENST00000457039 ARMT1Q9H993 441 aa17.04■□□□□ 0.32
SMPD4-215ENST00000457039 MKRN1Q9UHC7 482 aaKnown RBP17.04■□□□□ 0.32
SMPD4-215ENST00000457039 TLL2Q9Y6L7 1015 aa17.04■□□□□ 0.32
SMPD4-215ENST00000457039 DDTLA6NHG4 134 aaPredicted RBP17.03■□□□□ 0.32
SMPD4-215ENST00000457039 NF2P35240 595 aa17.03■□□□□ 0.32
SMPD4-215ENST00000457039 FKBP1BP68106 108 aa17.03■□□□□ 0.32
SMPD4-215ENST00000457039 MAP3K11Q16584 847 aa17.03■□□□□ 0.32
SMPD4-215ENST00000457039 SAPCD2Q86UD0 394 aa17.03■□□□□ 0.32
SMPD4-215ENST00000457039 MAPKAPK5Q8IW41 473 aa17.03■□□□□ 0.32
SMPD4-215ENST00000457039 SEC62Q99442 399 aaKnown RBP17.03■□□□□ 0.32
SMPD4-215ENST00000457039 M0R2C6 588 aa17.02■□□□□ 0.32
SMPD4-215ENST00000457039 SDSP20132 328 aa17.02■□□□□ 0.32
SMPD4-215ENST00000457039 HTRA3P83110 453 aa17.02■□□□□ 0.32
SMPD4-215ENST00000457039 MOB2Q70IA6 237 aa17.02■□□□□ 0.32
SMPD4-215ENST00000457039 C2orf69Q8N8R5 385 aa17.02■□□□□ 0.32
SMPD4-215ENST00000457039 AIDAQ96BJ3 306 aa17.02■□□□□ 0.32
SMPD4-215ENST00000457039 STRBPQ96SI9 672 aaKnown RBP17.02■□□□□ 0.32
SMPD4-215ENST00000457039 CRNKL1Q9BZJ0 848 aaKnown RBP17.02■□□□□ 0.32
SMPD4-215ENST00000457039 DDX60LQ5H9U9 1706 aaKnown RBP17.01■□□□□ 0.31
SMPD4-215ENST00000457039 USP5P45974 858 aa17.01■□□□□ 0.31
SMPD4-215ENST00000457039 SDR42E1Q8WUS8 393 aa17.01■□□□□ 0.31
SMPD4-215ENST00000457039 CSRNP1Q96S65 589 aa17.01■□□□□ 0.31
SMPD4-215ENST00000457039 FZD1Q9UP38 647 aa17.01■□□□□ 0.31
SMPD4-215ENST00000457039 A0A0D9SFI3 127 aa17■□□□□ 0.31
SMPD4-215ENST00000457039 RASSF10A6NK89 507 aa17■□□□□ 0.31
SMPD4-215ENST00000457039 GPAA1O43292 621 aa17■□□□□ 0.31
SMPD4-215ENST00000457039 PRKAB2O43741 272 aa17■□□□□ 0.31
SMPD4-215ENST00000457039 USP2O75604 605 aaPredicted RBP17■□□□□ 0.31
SMPD4-215ENST00000457039 MAP3K10Q02779 954 aa17■□□□□ 0.31
SMPD4-215ENST00000457039 HOOK2Q96ED9 719 aa17■□□□□ 0.31
SMPD4-215ENST00000457039 HHIPL1Q96JK4 782 aa17■□□□□ 0.31
SMPD4-215ENST00000457039 FAM227BQ96M60 508 aa17■□□□□ 0.31
SMPD4-215ENST00000457039 DHX36Q9H2U1 1008 aaKnown RBP17■□□□□ 0.31
SMPD4-215ENST00000457039 DCP1AQ9NPI6 582 aaPredicted RBP17■□□□□ 0.31
SMPD4-215ENST00000457039 HELLSQ9NRZ9 838 aa17■□□□□ 0.31
SMPD4-215ENST00000457039 AK9Q5TCS8 1911 aa17■□□□□ 0.31
SMPD4-215ENST00000457039 SIPA1L1O43166 1804 aa16.99■□□□□ 0.31
SMPD4-215ENST00000457039 PPP1R12BO60237 982 aaPredicted RBP16.99■□□□□ 0.31
SMPD4-215ENST00000457039 HUNKP57058 714 aa16.99■□□□□ 0.31
SMPD4-215ENST00000457039 NMIQ13287 307 aaPredicted RBP16.99■□□□□ 0.31
SMPD4-215ENST00000457039 PRKG1Q13976 671 aa16.99■□□□□ 0.31
SMPD4-215ENST00000457039 LDLRAD1Q5T700 205 aa16.99■□□□□ 0.31
SMPD4-215ENST00000457039 ZSCAN29Q8IWY8 852 aaPredicted RBP16.99■□□□□ 0.31
SMPD4-215ENST00000457039 ATP8A2Q9NTI2 1148 aa16.99■□□□□ 0.31
SMPD4-215ENST00000457039 ABT1Q9ULW3 272 aaKnown RBP16.99■□□□□ 0.31
SMPD4-215ENST00000457039 ANGEL1Q9UNK9 670 aaKnown RBP16.99■□□□□ 0.31
SMPD4-215ENST00000457039 CEP350Q5VT06 3117 aa16.98■□□□□ 0.31
SMPD4-215ENST00000457039 UBE2Q2LH0YL09 131 aa16.98■□□□□ 0.31
SMPD4-215ENST00000457039 TBC1D12O60347 775 aa16.98■□□□□ 0.31
SMPD4-215ENST00000457039 SLURP2P0DP57 97 aa16.98■□□□□ 0.31
SMPD4-215ENST00000457039 DCAF15Q66K64 600 aa16.98■□□□□ 0.31
SMPD4-215ENST00000457039 MIGA2Q7L4E1 593 aa16.98■□□□□ 0.31
SMPD4-215ENST00000457039 ARMC9Q7Z3E5 817 aa16.98■□□□□ 0.31
SMPD4-215ENST00000457039 METTL16Q86W50 562 aaKnown RBP16.98■□□□□ 0.31
SMPD4-215ENST00000457039 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.98■□□□□ 0.31
SMPD4-215ENST00000457039 KLRG1Q96E93 195 aa16.98■□□□□ 0.31
SMPD4-215ENST00000457039 PALD1Q9ULE6 856 aa16.98■□□□□ 0.31
SMPD4-215ENST00000457039 SLC4A4Q9Y6R1 1079 aa16.98■□□□□ 0.31
SMPD4-215ENST00000457039 NAV1Q8NEY1 1877 aa16.98■□□□□ 0.31
SMPD4-215ENST00000457039 UNCXA6NJT0 531 aa16.97■□□□□ 0.31
SMPD4-215ENST00000457039 GSG1L2A8MUP6 293 aa16.97■□□□□ 0.31
SMPD4-215ENST00000457039 HIP1O00291 1037 aa16.97■□□□□ 0.31
SMPD4-215ENST00000457039 FOXP2O15409 715 aa16.97■□□□□ 0.31
SMPD4-215ENST00000457039 GNAT2P19087 354 aa16.97■□□□□ 0.31
SMPD4-215ENST00000457039 IREB2P48200 963 aaKnown RBP16.97■□□□□ 0.31
SMPD4-215ENST00000457039 TTLL12Q14166 644 aaPredicted RBP16.97■□□□□ 0.31
SMPD4-215ENST00000457039 MCMDC2Q4G0Z9 681 aa16.97■□□□□ 0.31
SMPD4-215ENST00000457039 BMP2KLQ5H9B9 411 aa16.97■□□□□ 0.31
SMPD4-215ENST00000457039 CCDC129Q6ZRS4 1044 aa16.97■□□□□ 0.31
SMPD4-215ENST00000457039 ZNF341Q9BYN7 854 aa16.97■□□□□ 0.31
SMPD4-215ENST00000457039 PI4KBQ9UBF8 816 aa16.97■□□□□ 0.31
SMPD4-215ENST00000457039 SAP30BPQ9UHR5 308 aaKnown RBP16.97■□□□□ 0.31
SMPD4-215ENST00000457039 ZNF112Q9UJU3 913 aa16.97■□□□□ 0.31
SMPD4-215ENST00000457039 MYH1P12882 1939 aa16.96■□□□□ 0.31
SMPD4-215ENST00000457039 PHF20L1A8MW92 1017 aa16.96■□□□□ 0.31
SMPD4-215ENST00000457039 PATL2C9JE40 543 aaKnown RBP16.96■□□□□ 0.31
SMPD4-215ENST00000457039 DEFB115Q30KQ5 88 aa16.96■□□□□ 0.31
SMPD4-215ENST00000457039 GIMAP6Q6P9H5 292 aa16.96■□□□□ 0.31
SMPD4-215ENST00000457039 DNAJC5GQ8N7S2 189 aa16.96■□□□□ 0.31
SMPD4-215ENST00000457039 EPB41L4AQ9HCS5 686 aaPredicted RBP16.96■□□□□ 0.31
SMPD4-215ENST00000457039 OTOFQ9HC10 1997 aa16.96■□□□□ 0.31
SMPD4-215ENST00000457039 RGMBQ6NW40 437 aa16.95■□□□□ 0.3
SMPD4-215ENST00000457039 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.95■□□□□ 0.3
SMPD4-215ENST00000457039 ZNF589Q86UQ0 364 aaPredicted RBP16.95■□□□□ 0.3
SMPD4-215ENST00000457039 EHD4Q9H223 541 aa16.95■□□□□ 0.3
SMPD4-215ENST00000457039 DNAJC18Q9H819 358 aa16.95■□□□□ 0.3
SMPD4-215ENST00000457039 DIAPH3Q9NSV4 1193 aa16.95■□□□□ 0.3
SMPD4-215ENST00000457039 MCM9Q9NXL9 1143 aa16.95■□□□□ 0.3
SMPD4-215ENST00000457039 HERC5Q9UII4 1024 aaKnown RBP16.95■□□□□ 0.3
SMPD4-215ENST00000457039 FAM196BA6NMK8 535 aa16.94■□□□□ 0.3
SMPD4-215ENST00000457039 HLA-DOAP06340 250 aa16.94■□□□□ 0.3
SMPD4-215ENST00000457039 CHMLP26374 656 aa16.94■□□□□ 0.3
SMPD4-215ENST00000457039 PLCD1P51178 756 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms