RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 SAP30BPQ9UHR5 308 aaKnown RBP16.96■□□□□ 0.31
TIMP1-205ENST00000456754 DDX60LQ5H9U9 1706 aaKnown RBP16.96■□□□□ 0.3
TIMP1-205ENST00000456754 FLT1P17948 1338 aa16.96■□□□□ 0.3
TIMP1-205ENST00000456754 DDTLA6NHG4 134 aaPredicted RBP16.95■□□□□ 0.3
TIMP1-205ENST00000456754 SMIM22K7EJ46 135 aa16.95■□□□□ 0.3
TIMP1-205ENST00000456754 HTRA3P83110 453 aa16.95■□□□□ 0.3
TIMP1-205ENST00000456754 FSTL1Q12841 308 aa16.95■□□□□ 0.3
TIMP1-205ENST00000456754 PRKG1Q13976 671 aa16.95■□□□□ 0.3
TIMP1-205ENST00000456754 ZNF589Q86UQ0 364 aaPredicted RBP16.95■□□□□ 0.3
TIMP1-205ENST00000456754 GPAA1O43292 621 aa16.94■□□□□ 0.3
TIMP1-205ENST00000456754 IGSF3O75054 1194 aa16.94■□□□□ 0.3
TIMP1-205ENST00000456754 CELF2O95319 508 aaKnown RBP16.94■□□□□ 0.3
TIMP1-205ENST00000456754 ZFYP08048 801 aaPredicted RBP16.94■□□□□ 0.3
TIMP1-205ENST00000456754 AIDAQ96BJ3 306 aa16.94■□□□□ 0.3
TIMP1-205ENST00000456754 STRBPQ96SI9 672 aaKnown RBP16.94■□□□□ 0.3
TIMP1-205ENST00000456754 FOXP2O15409 715 aa16.93■□□□□ 0.3
TIMP1-205ENST00000456754 CYP2D6P10635 497 aa16.93■□□□□ 0.3
TIMP1-205ENST00000456754 C1QTNF8P60827 252 aa16.93■□□□□ 0.3
TIMP1-205ENST00000456754 VPS53Q5VIR6 699 aa16.93■□□□□ 0.3
TIMP1-205ENST00000456754 FKBP1CQ5VVH2 108 aa16.93■□□□□ 0.3
TIMP1-205ENST00000456754 CWC27Q6UX04 472 aaKnown RBP16.93■□□□□ 0.3
TIMP1-205ENST00000456754 FAM83AQ86UY5 434 aa16.93■□□□□ 0.3
TIMP1-205ENST00000456754 FAM151AQ8WW52 585 aa16.93■□□□□ 0.3
TIMP1-205ENST00000456754 OSBPL5Q9H0X9 879 aaPredicted RBP16.93■□□□□ 0.3
TIMP1-205ENST00000456754 PALD1Q9ULE6 856 aa16.93■□□□□ 0.3
TIMP1-205ENST00000456754 CYP2D7A0A087X1C5 515 aa16.92■□□□□ 0.3
TIMP1-205ENST00000456754 FAM196BA6NMK8 535 aa16.92■□□□□ 0.3
TIMP1-205ENST00000456754 ENTPD3O75355 529 aa16.92■□□□□ 0.3
TIMP1-205ENST00000456754 PLCG2P16885 1265 aa16.92■□□□□ 0.3
TIMP1-205ENST00000456754 CHMLP26374 656 aa16.92■□□□□ 0.3
TIMP1-205ENST00000456754 USP5P45974 858 aa16.92■□□□□ 0.3
TIMP1-205ENST00000456754 TNFAIP1Q13829 316 aa16.92■□□□□ 0.3
TIMP1-205ENST00000456754 BMP2KLQ5H9B9 411 aa16.92■□□□□ 0.3
TIMP1-205ENST00000456754 MIGA2Q7L4E1 593 aa16.92■□□□□ 0.3
TIMP1-205ENST00000456754 CRNKL1Q9BZJ0 848 aaKnown RBP16.92■□□□□ 0.3
TIMP1-205ENST00000456754 EPB41L4AQ9HCS5 686 aaPredicted RBP16.92■□□□□ 0.3
TIMP1-205ENST00000456754 MKRN1Q9UHC7 482 aaKnown RBP16.92■□□□□ 0.3
TIMP1-205ENST00000456754 SLC4A4Q9Y6R1 1079 aa16.92■□□□□ 0.3
TIMP1-205ENST00000456754 OTOFQ9HC10 1997 aa16.91■□□□□ 0.3
TIMP1-205ENST00000456754 GSG1L2A8MUP6 293 aa16.91■□□□□ 0.3
TIMP1-205ENST00000456754 TNNI2P48788 182 aa16.91■□□□□ 0.3
TIMP1-205ENST00000456754 ZSCAN29Q8IWY8 852 aaPredicted RBP16.91■□□□□ 0.3
TIMP1-205ENST00000456754 DCP1AQ9NPI6 582 aaPredicted RBP16.91■□□□□ 0.3
TIMP1-205ENST00000456754 DIAPH3Q9NSV4 1193 aa16.91■□□□□ 0.3
TIMP1-205ENST00000456754 ATRNL1Q5VV63 1379 aa16.9■□□□□ 0.3
TIMP1-205ENST00000456754 PAPPA2Q9BXP8 1791 aa16.9■□□□□ 0.3
TIMP1-205ENST00000456754 LRRFIP1Q32MZ4 808 aaKnown RBP16.9■□□□□ 0.3
TIMP1-205ENST00000456754 MCMDC2Q4G0Z9 681 aa16.9■□□□□ 0.3
TIMP1-205ENST00000456754 TMED8Q6PL24 325 aaPredicted RBP16.9■□□□□ 0.3
TIMP1-205ENST00000456754 HELLSQ9NRZ9 838 aa16.9■□□□□ 0.3
TIMP1-205ENST00000456754 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.9■□□□□ 0.3
TIMP1-205ENST00000456754 PPP2R3BQ9Y5P8 575 aa16.9■□□□□ 0.3
TIMP1-205ENST00000456754 RPAP1Q9BWH6 1393 aaPredicted RBP16.89■□□□□ 0.3
TIMP1-205ENST00000456754 PLCD1P51178 756 aa16.89■□□□□ 0.29
TIMP1-205ENST00000456754 CSRNP1Q96S65 589 aa16.89■□□□□ 0.29
TIMP1-205ENST00000456754 UBE2Q2LH0YL09 131 aa16.88■□□□□ 0.29
TIMP1-205ENST00000456754 USP2O75604 605 aaPredicted RBP16.88■□□□□ 0.29
TIMP1-205ENST00000456754 NPM3O75607 178 aaKnown RBP16.88■□□□□ 0.29
TIMP1-205ENST00000456754 APLP1P51693 650 aa16.88■□□□□ 0.29
TIMP1-205ENST00000456754 DNAJC18Q9H819 358 aa16.88■□□□□ 0.29
TIMP1-205ENST00000456754 GBA2Q9HCG7 927 aaPredicted RBP16.88■□□□□ 0.29
TIMP1-205ENST00000456754 MCM9Q9NXL9 1143 aa16.88■□□□□ 0.29
TIMP1-205ENST00000456754 CCDC171Q6TFL3 1326 aa16.88■□□□□ 0.29
TIMP1-205ENST00000456754 APPP05067 770 aa16.87■□□□□ 0.29
TIMP1-205ENST00000456754 TTLL12Q14166 644 aaPredicted RBP16.87■□□□□ 0.29
TIMP1-205ENST00000456754 RRP1BQ14684 758 aaKnown RBP16.87■□□□□ 0.29
TIMP1-205ENST00000456754 SHROOM1Q2M3G4 852 aaPredicted RBP16.87■□□□□ 0.29
TIMP1-205ENST00000456754 STK11IPQ8N1F8 1099 aa16.87■□□□□ 0.29
TIMP1-205ENST00000456754 ANGEL1Q9UNK9 670 aaKnown RBP16.87■□□□□ 0.29
TIMP1-205ENST00000456754 LAMB1P07942 1786 aa16.87■□□□□ 0.29
TIMP1-205ENST00000456754 COL2A1P02458 1487 aaPredicted RBP16.86■□□□□ 0.29
TIMP1-205ENST00000456754 TMEM88BA6NKF7 163 aa16.86■□□□□ 0.29
TIMP1-205ENST00000456754 USP17L12C9JPN9 530 aa16.86■□□□□ 0.29
TIMP1-205ENST00000456754 USP17L21D6R901 530 aa16.86■□□□□ 0.29
TIMP1-205ENST00000456754 SUPT20HL1Q3ZLR7 823 aa16.86■□□□□ 0.29
TIMP1-205ENST00000456754 CTR9Q6PD62 1173 aa16.86■□□□□ 0.29
TIMP1-205ENST00000456754 IFNL3Q8IZI9 196 aa16.86■□□□□ 0.29
TIMP1-205ENST00000456754 DYNLL2Q96FJ2 89 aa16.86■□□□□ 0.29
TIMP1-205ENST00000456754 CLMNQ96JQ2 1002 aa16.86■□□□□ 0.29
TIMP1-205ENST00000456754 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.86■□□□□ 0.29
TIMP1-205ENST00000456754 PATL2C9JE40 543 aaKnown RBP16.85■□□□□ 0.29
TIMP1-205ENST00000456754 HIP1O00291 1037 aa16.85■□□□□ 0.29
TIMP1-205ENST00000456754 HSPD1P10809 573 aaKnown RBP16.85■□□□□ 0.29
TIMP1-205ENST00000456754 INPP5BP32019 993 aa16.85■□□□□ 0.29
TIMP1-205ENST00000456754 CERS3Q8IU89 383 aa16.85■□□□□ 0.29
TIMP1-205ENST00000456754 SLC44A5Q8NCS7 719 aa16.85■□□□□ 0.29
TIMP1-205ENST00000456754 ATP8A2Q9NTI2 1148 aa16.85■□□□□ 0.29
TIMP1-205ENST00000456754 ABT1Q9ULW3 272 aaKnown RBP16.85■□□□□ 0.29
TIMP1-205ENST00000456754 TACC3Q9Y6A5 838 aa16.85■□□□□ 0.29
TIMP1-205ENST00000456754 SGSM2O43147 1006 aa16.84■□□□□ 0.29
TIMP1-205ENST00000456754 POLR3DP05423 398 aaPredicted RBP16.84■□□□□ 0.29
TIMP1-205ENST00000456754 HSPA6P17066 643 aa16.84■□□□□ 0.29
TIMP1-205ENST00000456754 NF2P35240 595 aa16.84■□□□□ 0.29
TIMP1-205ENST00000456754 JAG1P78504 1218 aa16.84■□□□□ 0.29
TIMP1-205ENST00000456754 PTH1RQ03431 593 aa16.84■□□□□ 0.29
TIMP1-205ENST00000456754 SAPCD2Q86UD0 394 aa16.84■□□□□ 0.29
TIMP1-205ENST00000456754 ESYT1Q9BSJ8 1104 aa16.84■□□□□ 0.29
TIMP1-205ENST00000456754 TLL2Q9Y6L7 1015 aa16.84■□□□□ 0.29
TIMP1-205ENST00000456754 PHF20L1A8MW92 1017 aa16.83■□□□□ 0.28
TIMP1-205ENST00000456754 MINDY4BA8MYZ0 360 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms