RNA–Protein interactions for RNA: ENST00000455144.6

XPC-204, Transcript of XPC complex subunit, DNA damage recognition and repair factor, humanhuman

TSL 4

Gene XPC, Length 958 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPC-204ENST00000455144 NBPF12Q5TAG4 269 aaPredicted RBP8.59□□□□□ -1.03
XPC-204ENST00000455144 PRAMEF18Q5VWM3 479 aa8.59□□□□□ -1.03
XPC-204ENST00000455144 APOBEC3HQ6NTF7 200 aaKnown RBP8.59□□□□□ -1.03
XPC-204ENST00000455144 RASAL3Q86YV0 1011 aa8.59□□□□□ -1.03
XPC-204ENST00000455144 TNS4Q8IZW8 715 aa8.59□□□□□ -1.03
XPC-204ENST00000455144 ZNF341Q9BYN7 854 aa8.59□□□□□ -1.03
XPC-204ENST00000455144 USP40Q9NVE5 1235 aa8.59□□□□□ -1.03
XPC-204ENST00000455144 RAI14Q9P0K7 980 aa8.59□□□□□ -1.03
XPC-204ENST00000455144 HMG20BQ9P0W2 317 aa8.59□□□□□ -1.03
XPC-204ENST00000455144 DAGLAQ9Y4D2 1042 aa8.59□□□□□ -1.03
XPC-204ENST00000455144 MROH7-TTC4A0A0A0MT08 1334 aa8.58□□□□□ -1.04
XPC-204ENST00000455144 GAKO14976 1311 aa8.58□□□□□ -1.04
XPC-204ENST00000455144 USP2O75604 605 aaPredicted RBP8.58□□□□□ -1.04
XPC-204ENST00000455144 IFIT2P09913 472 aaKnown RBP8.58□□□□□ -1.04
XPC-204ENST00000455144 HSPA8P11142 646 aaKnown RBP8.58□□□□□ -1.04
XPC-204ENST00000455144 LBX1P52954 281 aa8.58□□□□□ -1.04
XPC-204ENST00000455144 SPRYD7Q5W111 196 aa8.58□□□□□ -1.04
XPC-204ENST00000455144 CDC42EP5Q6NZY7 148 aa8.58□□□□□ -1.04
XPC-204ENST00000455144 DLK2Q6UY11 383 aa8.58□□□□□ -1.04
XPC-204ENST00000455144 RHPN1Q8TCX5 695 aa8.58□□□□□ -1.04
XPC-204ENST00000455144 CSRNP1Q96S65 589 aa8.58□□□□□ -1.04
XPC-204ENST00000455144 IDI2Q9BXS1 227 aa8.58□□□□□ -1.04
XPC-204ENST00000455144 MFRPQ9BY79 579 aa8.58□□□□□ -1.04
XPC-204ENST00000455144 MYO5AQ9Y4I1 1855 aaKnown RBP8.57□□□□□ -1.04
XPC-204ENST00000455144 OTOFQ9HC10 1997 aa8.57□□□□□ -1.04
XPC-204ENST00000455144 GPR75-ASB3A0A0A6YYF3 556 aa8.57□□□□□ -1.04
XPC-204ENST00000455144 MECOMQ03112 1051 aa8.57□□□□□ -1.04
XPC-204ENST00000455144 MAP3K12Q12852 859 aa8.57□□□□□ -1.04
XPC-204ENST00000455144 ARHGEF6Q15052 776 aa8.57□□□□□ -1.04
XPC-204ENST00000455144 DIXDC1Q155Q3 683 aa8.57□□□□□ -1.04
XPC-204ENST00000455144 GRIK5Q16478 980 aa8.57□□□□□ -1.04
XPC-204ENST00000455144 NOM1Q5C9Z4 860 aaKnown RBP8.57□□□□□ -1.04
XPC-204ENST00000455144 IFFO2Q5TF58 517 aa8.57□□□□□ -1.04
XPC-204ENST00000455144 NAA16Q6N069 864 aaPredicted RBP8.57□□□□□ -1.04
XPC-204ENST00000455144 AACSQ86V21 672 aa8.57□□□□□ -1.04
XPC-204ENST00000455144 ZSCAN29Q8IWY8 852 aaPredicted RBP8.57□□□□□ -1.04
XPC-204ENST00000455144 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.57□□□□□ -1.04
XPC-204ENST00000455144 TEPSINQ96N21 525 aa8.57□□□□□ -1.04
XPC-204ENST00000455144 DBNDD2Q9BQY9 259 aa8.57□□□□□ -1.04
XPC-204ENST00000455144 TMEM39BQ9GZU3 492 aa8.57□□□□□ -1.04
XPC-204ENST00000455144 SCAF8Q9UPN6 1271 aaKnown RBP8.57□□□□□ -1.04
XPC-204ENST00000455144 EXOC6BQ9Y2D4 811 aa8.57□□□□□ -1.04
XPC-204ENST00000455144 PCDHAC2Q9Y5I4 1007 aa8.57□□□□□ -1.04
XPC-204ENST00000455144 MYH7P12883 1935 aa8.56□□□□□ -1.04
XPC-204ENST00000455144 TRPA1O75762 1119 aa8.56□□□□□ -1.04
XPC-204ENST00000455144 MCAMP43121 646 aa8.56□□□□□ -1.04
XPC-204ENST00000455144 BTDP43251 543 aa8.56□□□□□ -1.04
XPC-204ENST00000455144 GTF2A2P52657 109 aa8.56□□□□□ -1.04
XPC-204ENST00000455144 COL13A1Q5TAT6 717 aaPredicted RBP8.56□□□□□ -1.04
XPC-204ENST00000455144 MOB2Q70IA6 237 aa8.56□□□□□ -1.04
XPC-204ENST00000455144 ERO1BQ86YB8 467 aa8.56□□□□□ -1.04
XPC-204ENST00000455144 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.56□□□□□ -1.04
XPC-204ENST00000455144 NSUN4Q96CB9 384 aaKnown RBP8.56□□□□□ -1.04
XPC-204ENST00000455144 EAF2Q96CJ1 260 aaPredicted RBP8.56□□□□□ -1.04
XPC-204ENST00000455144 GPATCH3Q96I76 525 aa8.56□□□□□ -1.04
XPC-204ENST00000455144 WNK4Q96J92 1243 aa8.56□□□□□ -1.04
XPC-204ENST00000455144 CFHR5Q9BXR6 569 aa8.56□□□□□ -1.04
XPC-204ENST00000455144 LRRCC1Q9C099 1032 aa8.56□□□□□ -1.04
XPC-204ENST00000455144 CCDC8Q9H0W5 538 aaPredicted RBP8.56□□□□□ -1.04
XPC-204ENST00000455144 RNF186Q9NXI6 227 aa8.56□□□□□ -1.04
XPC-204ENST00000455144 DBNLQ9UJU6 430 aaKnown RBP8.56□□□□□ -1.04
XPC-204ENST00000455144 FOCADQ5VW36 1801 aa8.56□□□□□ -1.04
XPC-204ENST00000455144 COL2A1P02458 1487 aaPredicted RBP8.56□□□□□ -1.04
XPC-204ENST00000455144 MYH1P12882 1939 aa8.56□□□□□ -1.04
XPC-204ENST00000455144 CDK5RAP2Q96SN8 1893 aa8.55□□□□□ -1.04
XPC-204ENST00000455144 RGS3P49796 1198 aa8.55□□□□□ -1.04
XPC-204ENST00000455144 PPP4CP60510 307 aa8.55□□□□□ -1.04
XPC-204ENST00000455144 PPATQ06203 517 aa8.55□□□□□ -1.04
XPC-204ENST00000455144 LRRFIP1Q32MZ4 808 aaKnown RBP8.55□□□□□ -1.04
XPC-204ENST00000455144 ZSCAN25Q6NSZ9 544 aa8.55□□□□□ -1.04
XPC-204ENST00000455144 WRNIP1Q96S55 665 aa8.55□□□□□ -1.04
XPC-204ENST00000455144 TBC1D2Q9BYX2 928 aa8.55□□□□□ -1.04
XPC-204ENST00000455144 DHX36Q9H2U1 1008 aaKnown RBP8.55□□□□□ -1.04
XPC-204ENST00000455144 ZCCHC17Q9NP64 241 aaKnown RBP8.55□□□□□ -1.04
XPC-204ENST00000455144 SSC5DA1L4H1 1573 aa8.54□□□□□ -1.04
XPC-204ENST00000455144 SPDYE5A6NIY4 337 aa8.54□□□□□ -1.04
XPC-204ENST00000455144 TBC1D12O60347 775 aa8.54□□□□□ -1.04
XPC-204ENST00000455144 CYP2E1P05181 493 aaPredicted RBP8.54□□□□□ -1.04
XPC-204ENST00000455144 CETPP11597 493 aa8.54□□□□□ -1.04
XPC-204ENST00000455144 ZAP70P43403 619 aa8.54□□□□□ -1.04
XPC-204ENST00000455144 CACNB3P54284 484 aa8.54□□□□□ -1.04
XPC-204ENST00000455144 RRP1P56182 461 aaKnown RBP8.54□□□□□ -1.04
XPC-204ENST00000455144 TCP10Q12799 353 aa8.54□□□□□ -1.04
XPC-204ENST00000455144 SNAPC2Q13487 334 aa8.54□□□□□ -1.04
XPC-204ENST00000455144 PKN2Q16513 984 aaKnown RBP8.54□□□□□ -1.04
XPC-204ENST00000455144 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.54□□□□□ -1.04
XPC-204ENST00000455144 TEX11Q8IYF3 940 aa8.54□□□□□ -1.04
XPC-204ENST00000455144 EFCAB3Q8N7B9 438 aa8.54□□□□□ -1.04
XPC-204ENST00000455144 OPTNQ96CV9 577 aa8.54□□□□□ -1.04
XPC-204ENST00000455144 YTHDC1Q96MU7 727 aaKnown RBP8.54□□□□□ -1.04
XPC-204ENST00000455144 TRIM34Q9BYJ4 488 aa8.54□□□□□ -1.04
XPC-204ENST00000455144 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.54□□□□□ -1.041e-6■■■□□ 17.9
XPC-204ENST00000455144 ELP3Q9H9T3 547 aa8.54□□□□□ -1.04
XPC-204ENST00000455144 IL1RAPL2Q9NP60 686 aa8.54□□□□□ -1.04
XPC-204ENST00000455144 SNRKQ9NRH2 765 aa8.54□□□□□ -1.04
XPC-204ENST00000455144 GINM1Q9NU53 330 aa8.54□□□□□ -1.04
XPC-204ENST00000455144 HERC5Q9UII4 1024 aaKnown RBP8.54□□□□□ -1.04
XPC-204ENST00000455144 ZNF112Q9UJU3 913 aa8.54□□□□□ -1.04
XPC-204ENST00000455144 DOCK1Q14185 1865 aa8.53□□□□□ -1.04
XPC-204ENST00000455144 ATRNL1Q5VV63 1379 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms