RNA–Protein interactions for RNA: ENST00000455069.1

HDAC9-217, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-217ENST00000455069 HDAC1Q13547 482 aaPredicted RBP13.79□□□□□ -0.2
HDAC9-217ENST00000455069 NAA16Q6N069 864 aaPredicted RBP13.79□□□□□ -0.2
HDAC9-217ENST00000455069 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.79□□□□□ -0.2
HDAC9-217ENST00000455069 DNAJC2Q99543 621 aaKnown RBP13.79□□□□□ -0.2
HDAC9-217ENST00000455069 DOCK1Q14185 1865 aa13.78□□□□□ -0.2
HDAC9-217ENST00000455069 ENTPD3O75355 529 aa13.78□□□□□ -0.2
HDAC9-217ENST00000455069 LDHCP07864 332 aa13.78□□□□□ -0.2
HDAC9-217ENST00000455069 SLURP2P0DP57 97 aa13.78□□□□□ -0.2
HDAC9-217ENST00000455069 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.78□□□□□ -0.2
HDAC9-217ENST00000455069 SH3RF3Q8TEJ3 882 aaPredicted RBP13.78□□□□□ -0.2
HDAC9-217ENST00000455069 BOLA2Q9H3K6 86 aa13.78□□□□□ -0.2
HDAC9-217ENST00000455069 AATFQ9NY61 560 aaKnown RBP eCLIP13.78□□□□□ -0.2
HDAC9-217ENST00000455069 COL2A1P02458 1487 aaPredicted RBP13.78□□□□□ -0.2
HDAC9-217ENST00000455069 PHIPQ8WWQ0 1821 aa13.78□□□□□ -0.2
HDAC9-217ENST00000455069 DDTLA6NHG4 134 aaPredicted RBP13.77□□□□□ -0.21
HDAC9-217ENST00000455069 GOLIM4O00461 696 aa13.77□□□□□ -0.21
HDAC9-217ENST00000455069 IGSF3O75054 1194 aa13.77□□□□□ -0.21
HDAC9-217ENST00000455069 CYP7A1P22680 504 aa13.77□□□□□ -0.21
HDAC9-217ENST00000455069 GJA5P36382 358 aa13.77□□□□□ -0.21
HDAC9-217ENST00000455069 IREB2P48200 963 aaKnown RBP13.77□□□□□ -0.21
HDAC9-217ENST00000455069 IRX6P78412 446 aaPredicted RBP13.77□□□□□ -0.21
HDAC9-217ENST00000455069 MKRN3Q13064 507 aaKnown RBP13.77□□□□□ -0.21
HDAC9-217ENST00000455069 PICALMQ13492 652 aa13.77□□□□□ -0.21
HDAC9-217ENST00000455069 VGLL4Q14135 290 aa13.77□□□□□ -0.21
HDAC9-217ENST00000455069 TSHZ3Q63HK5 1081 aa13.77□□□□□ -0.21
HDAC9-217ENST00000455069 MAGEB6Q8N7X4 407 aa13.77□□□□□ -0.21
HDAC9-217ENST00000455069 OTUD7AQ8TE49 926 aaPredicted RBP13.77□□□□□ -0.21
HDAC9-217ENST00000455069 HAUS7Q99871 368 aa13.77□□□□□ -0.21
HDAC9-217ENST00000455069 PTPRFP10586 1907 aa13.76□□□□□ -0.21
HDAC9-217ENST00000455069 SALL3Q9BXA9 1300 aa13.76□□□□□ -0.21
HDAC9-217ENST00000455069 CHGBP05060 677 aa13.76□□□□□ -0.21
HDAC9-217ENST00000455069 PPP4CP60510 307 aa13.76□□□□□ -0.21
HDAC9-217ENST00000455069 DYNLL1P63167 89 aaKnown RBP13.76□□□□□ -0.21
HDAC9-217ENST00000455069 AAMPQ13685 434 aa13.76□□□□□ -0.21
HDAC9-217ENST00000455069 SPRYD7Q5W111 196 aa13.76□□□□□ -0.21
HDAC9-217ENST00000455069 MIGA2Q7L4E1 593 aa13.76□□□□□ -0.21
HDAC9-217ENST00000455069 ANKRD13AQ8IZ07 590 aa13.76□□□□□ -0.21
HDAC9-217ENST00000455069 WNK4Q96J92 1243 aa13.76□□□□□ -0.21
HDAC9-217ENST00000455069 CSRNP1Q96S65 589 aa13.76□□□□□ -0.21
HDAC9-217ENST00000455069 PAG1Q9NWQ8 432 aa13.76□□□□□ -0.21
HDAC9-217ENST00000455069 BAZ2AQ9UIF9 1905 aaKnown RBP13.75□□□□□ -0.21
HDAC9-217ENST00000455069 TCRBV5S4A2TA0A5A2 114 aa13.75□□□□□ -0.21
HDAC9-217ENST00000455069 UNCXA6NJT0 531 aa13.75□□□□□ -0.21
HDAC9-217ENST00000455069 IGHDP01880 384 aa13.75□□□□□ -0.21
HDAC9-217ENST00000455069 PDE6AP16499 860 aa13.75□□□□□ -0.21
HDAC9-217ENST00000455069 MAP3K12Q12852 859 aa13.75□□□□□ -0.21
HDAC9-217ENST00000455069 TTF1Q15361 905 aaPredicted RBP13.75□□□□□ -0.21
HDAC9-217ENST00000455069 SLFNL1Q499Z3 407 aa13.75□□□□□ -0.21
HDAC9-217ENST00000455069 TEX11Q8IYF3 940 aa13.75□□□□□ -0.21
HDAC9-217ENST00000455069 MIGA1Q8NAN2 632 aa13.75□□□□□ -0.21
HDAC9-217ENST00000455069 WRNIP1Q96S55 665 aa13.75□□□□□ -0.21
HDAC9-217ENST00000455069 OSBPL5Q9H0X9 879 aaPredicted RBP13.75□□□□□ -0.21
HDAC9-217ENST00000455069 ELP3Q9H9T3 547 aa13.75□□□□□ -0.21
HDAC9-217ENST00000455069 ECHDC1Q9NTX5 307 aa13.75□□□□□ -0.21
HDAC9-217ENST00000455069 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.75□□□□□ -0.21
HDAC9-217ENST00000455069 SNCAIPQ9Y6H5 919 aa13.75□□□□□ -0.21
HDAC9-217ENST00000455069 FLT1P17948 1338 aa13.74□□□□□ -0.21
HDAC9-217ENST00000455069 MAP4K4O95819 1239 aaPredicted RBP13.74□□□□□ -0.21
HDAC9-217ENST00000455069 INPP5BP32019 993 aa13.74□□□□□ -0.21
HDAC9-217ENST00000455069 ZKSCAN4Q969J2 545 aaPredicted RBP13.74□□□□□ -0.21
HDAC9-217ENST00000455069 SLC10A4Q96EP9 437 aa13.74□□□□□ -0.21
HDAC9-217ENST00000455069 RIOK1Q9BRS2 568 aaKnown RBP13.74□□□□□ -0.21
HDAC9-217ENST00000455069 ZNF112Q9UJU3 913 aa13.74□□□□□ -0.21
HDAC9-217ENST00000455069 ZNF532Q9HCE3 1301 aa13.73□□□□□ -0.21
HDAC9-217ENST00000455069 BAG3O95817 575 aa13.73□□□□□ -0.21
HDAC9-217ENST00000455069 MAP3K9P80192 1104 aa13.73□□□□□ -0.21
HDAC9-217ENST00000455069 MAP3K10Q02779 954 aa13.73□□□□□ -0.21
HDAC9-217ENST00000455069 SLC9C2Q5TAH2 1124 aa13.73□□□□□ -0.21
HDAC9-217ENST00000455069 DCAF15Q66K64 600 aa13.73□□□□□ -0.21
HDAC9-217ENST00000455069 SMC5Q8IY18 1101 aa13.73□□□□□ -0.21
HDAC9-217ENST00000455069 PI4K2BQ8TCG2 481 aa13.73□□□□□ -0.21
HDAC9-217ENST00000455069 TGFBRAP1Q8WUH2 860 aa13.73□□□□□ -0.21
HDAC9-217ENST00000455069 GCC1Q96CN9 775 aa13.73□□□□□ -0.21
HDAC9-217ENST00000455069 OPTNQ96CV9 577 aa13.73□□□□□ -0.21
HDAC9-217ENST00000455069 HOOK2Q96ED9 719 aa13.73□□□□□ -0.21
HDAC9-217ENST00000455069 NOL10Q9BSC4 688 aaKnown RBP13.73□□□□□ -0.21
HDAC9-217ENST00000455069 ZNF341Q9BYN7 854 aa13.73□□□□□ -0.21
HDAC9-217ENST00000455069 SAGE1Q9NXZ1 904 aa13.73□□□□□ -0.21
HDAC9-217ENST00000455069 FAM196BA6NMK8 535 aa13.72□□□□□ -0.21
HDAC9-217ENST00000455069 PHF20L1A8MW92 1017 aa13.72□□□□□ -0.21
HDAC9-217ENST00000455069 ZBTB48P10074 688 aaPredicted RBP13.72□□□□□ -0.21
HDAC9-217ENST00000455069 PLCG2P16885 1265 aa13.72□□□□□ -0.21
HDAC9-217ENST00000455069 ADD2P35612 726 aa13.72□□□□□ -0.21
HDAC9-217ENST00000455069 ANKRD45Q5TZF3 282 aa13.72□□□□□ -0.21
HDAC9-217ENST00000455069 TMED8Q6PL24 325 aaPredicted RBP13.72□□□□□ -0.21
HDAC9-217ENST00000455069 MAPKAPK5Q8IW41 473 aa13.72□□□□□ -0.21
HDAC9-217ENST00000455069 ZSCAN29Q8IWY8 852 aaPredicted RBP13.72□□□□□ -0.21
HDAC9-217ENST00000455069 MCOLN1Q9GZU1 580 aa13.72□□□□□ -0.21
HDAC9-217ENST00000455069 RNF186Q9NXI6 227 aa13.72□□□□□ -0.21
HDAC9-217ENST00000455069 TTC41PQ6P2S7 1318 aa13.71□□□□□ -0.21
HDAC9-217ENST00000455069 SPDYE5A6NIY4 337 aa13.71□□□□□ -0.21
HDAC9-217ENST00000455069 CCDC85CA6NKD9 419 aa13.71□□□□□ -0.21
HDAC9-217ENST00000455069 TM4SF4P48230 202 aa13.71□□□□□ -0.21
HDAC9-217ENST00000455069 OTUD5Q96G74 571 aa13.71□□□□□ -0.21
HDAC9-217ENST00000455069 MS4A4AQ96JQ5 239 aa13.71□□□□□ -0.21
HDAC9-217ENST00000455069 CSADQ9Y600 493 aa13.71□□□□□ -0.21
HDAC9-217ENST00000455069 MYH8P13535 1937 aa13.7□□□□□ -0.22
HDAC9-217ENST00000455069 MX1P20591 662 aa13.7□□□□□ -0.22
HDAC9-217ENST00000455069 RRP1BQ14684 758 aaKnown RBP13.7□□□□□ -0.22
HDAC9-217ENST00000455069 NOL9Q5SY16 702 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms