RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 GJB2P29033 226 aa8.02□□□□□ -1.13
ECHDC1-210ENST00000454859 KLHL40Q2TBA0 621 aa8.02□□□□□ -1.13
ECHDC1-210ENST00000454859 STRIP1Q5VSL9 837 aa8.02□□□□□ -1.13
ECHDC1-210ENST00000454859 IQCA1Q86XH1 822 aa8.02□□□□□ -1.13
ECHDC1-210ENST00000454859 CCDC83Q8IWF9 413 aa8.02□□□□□ -1.13
ECHDC1-210ENST00000454859 IGDCC4Q8TDY8 1250 aa8.02□□□□□ -1.13
ECHDC1-210ENST00000454859 ANO8Q9HCE9 1232 aaPredicted RBP8.02□□□□□ -1.13
ECHDC1-210ENST00000454859 RBM27Q9P2N5 1060 aaKnown RBP8.02□□□□□ -1.13
ECHDC1-210ENST00000454859 F13A1P00488 732 aa8.01□□□□□ -1.13
ECHDC1-210ENST00000454859 LARP1BQ659C4 914 aaKnown RBP8.01□□□□□ -1.13
ECHDC1-210ENST00000454859 NBPF3Q9H094 633 aa8.01□□□□□ -1.13
ECHDC1-210ENST00000454859 DCP1AQ9NPI6 582 aaPredicted RBP8.01□□□□□ -1.13
ECHDC1-210ENST00000454859 MKRN1Q9UHC7 482 aaKnown RBP8.01□□□□□ -1.13
ECHDC1-210ENST00000454859 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.01□□□□□ -1.13
ECHDC1-210ENST00000454859 ELP1O95163 1332 aa8.01□□□□□ -1.13
ECHDC1-210ENST00000454859 NCLP19338 710 aaKnown RBP8.01□□□□□ -1.13
ECHDC1-210ENST00000454859 TTLL5Q6EMB2 1281 aa8.01□□□□□ -1.13
ECHDC1-210ENST00000454859 TXNRD3Q86VQ6 643 aa8.01□□□□□ -1.13
ECHDC1-210ENST00000454859 TBC1D10CQ8IV04 446 aa8.01□□□□□ -1.13
ECHDC1-210ENST00000454859 TTLL6Q8N841 843 aa8.01□□□□□ -1.13
ECHDC1-210ENST00000454859 FAM184AQ8NB25 1140 aa8.01□□□□□ -1.13
ECHDC1-210ENST00000454859 SPRYD3Q8NCJ5 442 aa8.01□□□□□ -1.13
ECHDC1-210ENST00000454859 SYAP1Q96A49 352 aaPredicted RBP8.01□□□□□ -1.13
ECHDC1-210ENST00000454859 RBM28Q9NW13 759 aaKnown RBP8.01□□□□□ -1.13
ECHDC1-210ENST00000454859 ZDHHC9Q9Y397 364 aa8.01□□□□□ -1.13
ECHDC1-210ENST00000454859 DDAH1O94760 285 aa8□□□□□ -1.13
ECHDC1-210ENST00000454859 CHGBP05060 677 aa8□□□□□ -1.13
ECHDC1-210ENST00000454859 KLRK1P26718 216 aa8□□□□□ -1.13
ECHDC1-210ENST00000454859 POLD1P28340 1107 aa8□□□□□ -1.13
ECHDC1-210ENST00000454859 ANTXR2P58335 489 aa8□□□□□ -1.13
ECHDC1-210ENST00000454859 KIAA2012Q0VF49 1180 aa8□□□□□ -1.13
ECHDC1-210ENST00000454859 CHAF1AQ13111 956 aaPredicted RBP8□□□□□ -1.13
ECHDC1-210ENST00000454859 CCDC93Q567U6 631 aa8□□□□□ -1.13
ECHDC1-210ENST00000454859 MFSD14BQ5SR56 506 aa8□□□□□ -1.13
ECHDC1-210ENST00000454859 CTR9Q6PD62 1173 aa8□□□□□ -1.13
ECHDC1-210ENST00000454859 NSUN7Q8NE18 718 aaKnown RBP8□□□□□ -1.13
ECHDC1-210ENST00000454859 ZNF384Q8TF68 577 aa8□□□□□ -1.13
ECHDC1-210ENST00000454859 UBAC1Q9BSL1 405 aa8□□□□□ -1.13
ECHDC1-210ENST00000454859 SCAND2PQ9GZW5 306 aaPredicted RBP8□□□□□ -1.13
ECHDC1-210ENST00000454859 MTFR1LQ9H019 292 aa8□□□□□ -1.13
ECHDC1-210ENST00000454859 MTMR6Q9Y217 621 aa8□□□□□ -1.13
ECHDC1-210ENST00000454859 TAF6LQ9Y6J9 622 aa8□□□□□ -1.13
ECHDC1-210ENST00000454859 MYH6P13533 1939 aa8□□□□□ -1.13
ECHDC1-210ENST00000454859 MYH8P13535 1937 aa8□□□□□ -1.13
ECHDC1-210ENST00000454859 ARFGEF1Q9Y6D6 1849 aa8□□□□□ -1.13
ECHDC1-210ENST00000454859 CCDC69A6NI79 296 aa8□□□□□ -1.13
ECHDC1-210ENST00000454859 G3V3G9 751 aa8□□□□□ -1.13
ECHDC1-210ENST00000454859 ZBTB43O43298 467 aa8□□□□□ -1.13
ECHDC1-210ENST00000454859 TRAK2O60296 914 aa8□□□□□ -1.13
ECHDC1-210ENST00000454859 PRDX5P30044 214 aa8□□□□□ -1.13
ECHDC1-210ENST00000454859 ST3GAL1Q11201 340 aa8□□□□□ -1.13
ECHDC1-210ENST00000454859 SCRN1Q12765 414 aa8□□□□□ -1.13
ECHDC1-210ENST00000454859 TMEM67Q5HYA8 995 aa8□□□□□ -1.13
ECHDC1-210ENST00000454859 DCAF8Q5TAQ9 597 aa8□□□□□ -1.13
ECHDC1-210ENST00000454859 C12orf60Q5U649 245 aa8□□□□□ -1.13
ECHDC1-210ENST00000454859 DGKHQ86XP1 1220 aa8□□□□□ -1.13
ECHDC1-210ENST00000454859 CCDC24Q8N4L8 307 aa8□□□□□ -1.13
ECHDC1-210ENST00000454859 SP7Q8TDD2 431 aaPredicted RBP8□□□□□ -1.13
ECHDC1-210ENST00000454859 ZNF622Q969S3 477 aaKnown RBP eCLIP8□□□□□ -1.131e-7■□□□□ 9.8
ECHDC1-210ENST00000454859 LY9Q9HBG7 655 aa8□□□□□ -1.13
ECHDC1-210ENST00000454859 ZSWIM5Q9P217 1185 aa8□□□□□ -1.13
ECHDC1-210ENST00000454859 CFAP45Q9UL16 551 aa8□□□□□ -1.13
ECHDC1-210ENST00000454859 FER1L6Q2WGJ9 1857 aa8□□□□□ -1.13
ECHDC1-210ENST00000454859 TCHHQ07283 1943 aa7.99□□□□□ -1.13
ECHDC1-210ENST00000454859 KLF18A0A0U1RQI7 1052 aa7.99□□□□□ -1.13
ECHDC1-210ENST00000454859 CPLX1O14810 134 aa7.99□□□□□ -1.13
ECHDC1-210ENST00000454859 IFIT3O14879 490 aaKnown RBP7.99□□□□□ -1.13
ECHDC1-210ENST00000454859 LETM1O95202 739 aaPredicted RBP7.99□□□□□ -1.13
ECHDC1-210ENST00000454859 LARGE1O95461 756 aa7.99□□□□□ -1.13
ECHDC1-210ENST00000454859 CPA1P15085 419 aa7.99□□□□□ -1.13
ECHDC1-210ENST00000454859 SMARCA1P28370 1054 aa7.99□□□□□ -1.13
ECHDC1-210ENST00000454859 GNAQP50148 359 aa7.99□□□□□ -1.13
ECHDC1-210ENST00000454859 WTAPQ15007 396 aa7.99□□□□□ -1.13
ECHDC1-210ENST00000454859 SLFNL1Q499Z3 407 aa7.99□□□□□ -1.13
ECHDC1-210ENST00000454859 APOA5Q6Q788 366 aa7.99□□□□□ -1.13
ECHDC1-210ENST00000454859 BRAPQ7Z569 592 aa7.99□□□□□ -1.13
ECHDC1-210ENST00000454859 ADGRA1Q86SQ6 560 aa7.99□□□□□ -1.13
ECHDC1-210ENST00000454859 TTC6Q86TZ1 520 aa7.99□□□□□ -1.13
ECHDC1-210ENST00000454859 MIGA1Q8NAN2 632 aa7.99□□□□□ -1.13
ECHDC1-210ENST00000454859 LZTS2Q9BRK4 669 aa7.99□□□□□ -1.13
ECHDC1-210ENST00000454859 SWAP70Q9UH65 585 aa7.99□□□□□ -1.13
ECHDC1-210ENST00000454859 SERPINA10Q9UK55 444 aa7.99□□□□□ -1.13
ECHDC1-210ENST00000454859 CD2APQ9Y5K6 639 aa7.99□□□□□ -1.13
ECHDC1-210ENST00000454859 SLC12A7Q9Y666 1083 aa7.99□□□□□ -1.13
ECHDC1-210ENST00000454859 MORC2Q9Y6X9 1032 aaPredicted RBP7.99□□□□□ -1.13
ECHDC1-210ENST00000454859 PLIN4Q96Q06 1357 aa7.99□□□□□ -1.13
ECHDC1-210ENST00000454859 IFNAR1P17181 557 aa7.98□□□□□ -1.13
ECHDC1-210ENST00000454859 USP5P45974 858 aa7.98□□□□□ -1.13
ECHDC1-210ENST00000454859 METAP2P50579 478 aaKnown RBP eCLIP7.98□□□□□ -1.13
ECHDC1-210ENST00000454859 HAND2P61296 217 aa7.98□□□□□ -1.13
ECHDC1-210ENST00000454859 KRT85P78386 507 aa7.98□□□□□ -1.13
ECHDC1-210ENST00000454859 APOBRQ0VD83 1088 aa7.98□□□□□ -1.13
ECHDC1-210ENST00000454859 TEKT1Q969V4 418 aa7.98□□□□□ -1.13
ECHDC1-210ENST00000454859 ZDHHC15Q96MV8 337 aa7.98□□□□□ -1.13
ECHDC1-210ENST00000454859 EHD4Q9H223 541 aa7.98□□□□□ -1.13
ECHDC1-210ENST00000454859 IQSEC3Q9UPP2 1182 aaPredicted RBP7.98□□□□□ -1.13
ECHDC1-210ENST00000454859 LTBP3Q9NS15 1303 aa7.98□□□□□ -1.13
ECHDC1-210ENST00000454859 PTPDC1A2A3K4 754 aa7.98□□□□□ -1.13
ECHDC1-210ENST00000454859 USP17L3A6NCW0 530 aa7.98□□□□□ -1.13
ECHDC1-210ENST00000454859 USP17L4A6NCW7 530 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms