RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 PRKG1Q13976 671 aa17.21■□□□□ 0.35
HDAC4-205ENST00000454542 TSHZ3Q63HK5 1081 aa17.21■□□□□ 0.35
HDAC4-205ENST00000454542 TEX11Q8IYF3 940 aa17.21■□□□□ 0.35
HDAC4-205ENST00000454542 SH3RF3Q8TEJ3 882 aaPredicted RBP17.21■□□□□ 0.35
HDAC4-205ENST00000454542 RIOK1Q9BRS2 568 aaKnown RBP17.21■□□□□ 0.35
HDAC4-205ENST00000454542 FLT1P17948 1338 aa17.21■□□□□ 0.34
HDAC4-205ENST00000454542 DOCK1Q14185 1865 aa17.2■□□□□ 0.34
HDAC4-205ENST00000454542 HSPA1AP0DMV8 641 aaKnown RBP17.2■□□□□ 0.34
HDAC4-205ENST00000454542 HSPA1BP0DMV9 641 aaKnown RBP17.2■□□□□ 0.34
HDAC4-205ENST00000454542 MX1P20591 662 aa17.2■□□□□ 0.34
HDAC4-205ENST00000454542 ADD2P35612 726 aa17.2■□□□□ 0.34
HDAC4-205ENST00000454542 MAP3K10Q02779 954 aa17.2■□□□□ 0.34
HDAC4-205ENST00000454542 ANKRD45Q5TZF3 282 aa17.2■□□□□ 0.34
HDAC4-205ENST00000454542 DCAF15Q66K64 600 aa17.2■□□□□ 0.34
HDAC4-205ENST00000454542 ANKRD13AQ8IZ07 590 aa17.2■□□□□ 0.34
HDAC4-205ENST00000454542 ZIC5Q96T25 663 aa17.2■□□□□ 0.34
HDAC4-205ENST00000454542 NOL10Q9BSC4 688 aaKnown RBP17.2■□□□□ 0.34
HDAC4-205ENST00000454542 OSBPL5Q9H0X9 879 aaPredicted RBP17.2■□□□□ 0.34
HDAC4-205ENST00000454542 WBP1LQ9NX94 342 aa17.2■□□□□ 0.34
HDAC4-205ENST00000454542 STAP2Q9UGK3 403 aa17.2■□□□□ 0.34
HDAC4-205ENST00000454542 DDTLA6NHG4 134 aaPredicted RBP17.19■□□□□ 0.34
HDAC4-205ENST00000454542 GLRX3O76003 335 aaKnown RBP17.19■□□□□ 0.34
HDAC4-205ENST00000454542 DYNLL1P63167 89 aaKnown RBP17.19■□□□□ 0.34
HDAC4-205ENST00000454542 PICALMQ13492 652 aa17.19■□□□□ 0.34
HDAC4-205ENST00000454542 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.19■□□□□ 0.34
HDAC4-205ENST00000454542 CLMNQ96JQ2 1002 aa17.19■□□□□ 0.34
HDAC4-205ENST00000454542 BCL11AQ9H165 835 aa17.19■□□□□ 0.34
HDAC4-205ENST00000454542 ZNF112Q9UJU3 913 aa17.19■□□□□ 0.34
HDAC4-205ENST00000454542 MYH1P12882 1939 aa17.19■□□□□ 0.34
HDAC4-205ENST00000454542 AK9Q5TCS8 1911 aa17.19■□□□□ 0.34
HDAC4-205ENST00000454542 ZNF532Q9HCE3 1301 aa17.19■□□□□ 0.34
HDAC4-205ENST00000454542 MAP2K1Q02750 393 aaPredicted RBP17.18■□□□□ 0.34
HDAC4-205ENST00000454542 NUCB1Q02818 461 aa17.18■□□□□ 0.34
HDAC4-205ENST00000454542 GRM1Q13255 1194 aa17.18■□□□□ 0.34
HDAC4-205ENST00000454542 SLC9C2Q5TAH2 1124 aa17.18■□□□□ 0.34
HDAC4-205ENST00000454542 KBTBD3Q8NAB2 608 aa17.18■□□□□ 0.34
HDAC4-205ENST00000454542 CSRNP1Q96S65 589 aa17.18■□□□□ 0.34
HDAC4-205ENST00000454542 ZNF341Q9BYN7 854 aa17.18■□□□□ 0.34
HDAC4-205ENST00000454542 ERC2O15083 957 aa17.17■□□□□ 0.34
HDAC4-205ENST00000454542 ZBTB48P10074 688 aaPredicted RBP17.17■□□□□ 0.34
HDAC4-205ENST00000454542 VGLL4Q14135 290 aa17.17■□□□□ 0.34
HDAC4-205ENST00000454542 UBE3CQ15386 1083 aa17.17■□□□□ 0.34
HDAC4-205ENST00000454542 NOL9Q5SY16 702 aaKnown RBP17.17■□□□□ 0.34
HDAC4-205ENST00000454542 SPRYD7Q5W111 196 aa17.17■□□□□ 0.34
HDAC4-205ENST00000454542 MIGA1Q8NAN2 632 aa17.17■□□□□ 0.34
HDAC4-205ENST00000454542 WNK4Q96J92 1243 aa17.17■□□□□ 0.34
HDAC4-205ENST00000454542 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.17■□□□□ 0.345e-6■■■■■ 34.6
HDAC4-205ENST00000454542 SNCAIPQ9Y6H5 919 aa17.17■□□□□ 0.34
HDAC4-205ENST00000454542 ATAD5Q96QE3 1844 aa17.17■□□□□ 0.34
HDAC4-205ENST00000454542 TBC1D12O60347 775 aa17.16■□□□□ 0.34
HDAC4-205ENST00000454542 GJA5P36382 358 aa17.16■□□□□ 0.34
HDAC4-205ENST00000454542 PDE1AP54750 535 aa17.16■□□□□ 0.34
HDAC4-205ENST00000454542 MAP3K9P80192 1104 aa17.16■□□□□ 0.34
HDAC4-205ENST00000454542 KIF23Q02241 960 aaPredicted RBP17.16■□□□□ 0.34
HDAC4-205ENST00000454542 CHD1LQ86WJ1 897 aa17.16■□□□□ 0.34
HDAC4-205ENST00000454542 WRNIP1Q96S55 665 aa17.16■□□□□ 0.34
HDAC4-205ENST00000454542 LNPKQ9C0E8 428 aa17.16■□□□□ 0.34
HDAC4-205ENST00000454542 PHIPQ8WWQ0 1821 aa17.16■□□□□ 0.34
HDAC4-205ENST00000454542 SPDYE5A6NIY4 337 aa17.15■□□□□ 0.34
HDAC4-205ENST00000454542 PHF20L1A8MW92 1017 aa17.15■□□□□ 0.34
HDAC4-205ENST00000454542 CHGBP05060 677 aa17.15■□□□□ 0.34
HDAC4-205ENST00000454542 METTL16Q86W50 562 aaKnown RBP17.15■□□□□ 0.34
HDAC4-205ENST00000454542 REM2Q8IYK8 340 aaPredicted RBP17.15■□□□□ 0.34
HDAC4-205ENST00000454542 TGFBRAP1Q8WUH2 860 aa17.15■□□□□ 0.34
HDAC4-205ENST00000454542 MAGEB6P1A0A0J9YX57 407 aa17.14■□□□□ 0.33
HDAC4-205ENST00000454542 SLFNL1Q499Z3 407 aa17.14■□□□□ 0.33
HDAC4-205ENST00000454542 ZSCAN25Q6NSZ9 544 aa17.14■□□□□ 0.33
HDAC4-205ENST00000454542 MIGA2Q7L4E1 593 aa17.14■□□□□ 0.33
HDAC4-205ENST00000454542 MAPKAPK5Q8IW41 473 aa17.14■□□□□ 0.33
HDAC4-205ENST00000454542 LCORLQ8N3X6 602 aa17.14■□□□□ 0.33
HDAC4-205ENST00000454542 DHX36Q9H2U1 1008 aaKnown RBP17.14■□□□□ 0.33
HDAC4-205ENST00000454542 ZBTB47Q9UFB7 747 aaPredicted RBP17.14■□□□□ 0.33
HDAC4-205ENST00000454542 CSADQ9Y600 493 aa17.14■□□□□ 0.33
HDAC4-205ENST00000454542 FOXN1O15353 648 aa17.13■□□□□ 0.33
HDAC4-205ENST00000454542 INPP5BP32019 993 aa17.13■□□□□ 0.33
HDAC4-205ENST00000454542 ZSCAN29Q8IWY8 852 aaPredicted RBP17.13■□□□□ 0.33
HDAC4-205ENST00000454542 SLC10A4Q96EP9 437 aa17.13■□□□□ 0.33
HDAC4-205ENST00000454542 OSBPL3Q9H4L5 887 aa17.13■□□□□ 0.33
HDAC4-205ENST00000454542 DNAJC18Q9H819 358 aa17.13■□□□□ 0.33
HDAC4-205ENST00000454542 ELP3Q9H9T3 547 aa17.13■□□□□ 0.33
HDAC4-205ENST00000454542 PTPRFP10586 1907 aa17.13■□□□□ 0.33
HDAC4-205ENST00000454542 CA12O43570 354 aa17.12■□□□□ 0.33
HDAC4-205ENST00000454542 SLURP2P0DP57 97 aa17.12■□□□□ 0.33
HDAC4-205ENST00000454542 B4GALNT3Q6L9W6 998 aa17.12■□□□□ 0.33
HDAC4-205ENST00000454542 APPBP2Q92624 585 aa17.12■□□□□ 0.33
HDAC4-205ENST00000454542 ZKSCAN4Q969J2 545 aaPredicted RBP17.12■□□□□ 0.33
HDAC4-205ENST00000454542 OPTNQ96CV9 577 aa17.12■□□□□ 0.33
HDAC4-205ENST00000454542 CRNKL1Q9BZJ0 848 aaKnown RBP17.12■□□□□ 0.33
HDAC4-205ENST00000454542 SAGE1Q9NXZ1 904 aa17.12■□□□□ 0.33
HDAC4-205ENST00000454542 HERC5Q9UII4 1024 aaKnown RBP17.12■□□□□ 0.33
HDAC4-205ENST00000454542 TESPA1A2RU30 521 aaPredicted RBP17.11■□□□□ 0.33
HDAC4-205ENST00000454542 MBD4O95243 580 aa17.11■□□□□ 0.33
HDAC4-205ENST00000454542 ZFYP08048 801 aaPredicted RBP17.11■□□□□ 0.33
HDAC4-205ENST00000454542 HSPA8P11142 646 aaKnown RBP17.11■□□□□ 0.33
HDAC4-205ENST00000454542 TM4SF4P48230 202 aa17.11■□□□□ 0.33
HDAC4-205ENST00000454542 SREBF2Q12772 1141 aa17.11■□□□□ 0.33
HDAC4-205ENST00000454542 ERO1BQ86YB8 467 aa17.11■□□□□ 0.33
HDAC4-205ENST00000454542 PLEKHM2Q8IWE5 1019 aa17.11■□□□□ 0.33
HDAC4-205ENST00000454542 CNKSR2Q8WXI2 1034 aa17.11■□□□□ 0.33
HDAC4-205ENST00000454542 AIDAQ96BJ3 306 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms