RNA–Protein interactions for RNA: ENST00000454181.6

LYSMD2-202, Transcript of LysM domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LYSMD2, Length 1,228 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-202ENST00000454181 CYP2C8P10632 490 aa29.39■■■□□ 2.3
LYSMD2-202ENST00000454181 RASGRF1Q13972 1273 aa29.39■■■□□ 2.3
LYSMD2-202ENST00000454181 MVPQ14764 893 aaKnown RBP29.39■■■□□ 2.3
LYSMD2-202ENST00000454181 PHF20L1A8MW92 1017 aa29.38■■■□□ 2.29
LYSMD2-202ENST00000454181 SRGAP3O43295 1099 aa29.38■■■□□ 2.29
LYSMD2-202ENST00000454181 GNAI3P08754 354 aa29.38■■■□□ 2.29
LYSMD2-202ENST00000454181 PICALMQ13492 652 aa29.38■■■□□ 2.29
LYSMD2-202ENST00000454181 MTFR1Q15390 333 aa29.38■■■□□ 2.29
LYSMD2-202ENST00000454181 GPAT2Q6NUI2 795 aa29.38■■■□□ 2.29
LYSMD2-202ENST00000454181 GADL1Q6ZQY3 521 aa29.38■■■□□ 2.29
LYSMD2-202ENST00000454181 PDS5AQ29RF7 1337 aaKnown RBP29.38■■■□□ 2.29
LYSMD2-202ENST00000454181 ZSWIM8A7E2V4 1837 aa29.38■■■□□ 2.29
LYSMD2-202ENST00000454181 A0A1B0GUL7 405 aa29.37■■■□□ 2.29
LYSMD2-202ENST00000454181 PTPRAP18433 802 aa29.37■■■□□ 2.29
LYSMD2-202ENST00000454181 BTDP43251 543 aa29.37■■■□□ 2.29
LYSMD2-202ENST00000454181 UBXN2AP68543 259 aa29.37■■■□□ 2.29
LYSMD2-202ENST00000454181 ERICH6Q7L0X2 663 aa29.37■■■□□ 2.29
LYSMD2-202ENST00000454181 FAM163AQ96GL9 167 aaPredicted RBP29.37■■■□□ 2.29
LYSMD2-202ENST00000454181 XAGE2Q96GT9 111 aa29.37■■■□□ 2.29
LYSMD2-202ENST00000454181 NEUROD6Q96NK8 337 aa29.37■■■□□ 2.29
LYSMD2-202ENST00000454181 A0A0G2JLL6 359 aaPredicted RBP29.36■■■□□ 2.29
LYSMD2-202ENST00000454181 CTNND1O60716 968 aaKnown RBP29.36■■■□□ 2.29
LYSMD2-202ENST00000454181 TFCP2Q12800 502 aa29.36■■■□□ 2.29
LYSMD2-202ENST00000454181 GORABQ5T7V8 394 aa29.36■■■□□ 2.29
LYSMD2-202ENST00000454181 PRRT2Q7Z6L0 340 aaPredicted RBP29.36■■■□□ 2.29
LYSMD2-202ENST00000454181 BCRP11274 1271 aa29.35■■■□□ 2.29
LYSMD2-202ENST00000454181 SH3BP5LQ7L8J4 393 aa29.35■■■□□ 2.29
LYSMD2-202ENST00000454181 DPF3Q92784 378 aa29.35■■■□□ 2.29
LYSMD2-202ENST00000454181 AFG3L2Q9Y4W6 797 aa29.35■■■□□ 2.29
LYSMD2-202ENST00000454181 ATRNL1Q5VV63 1379 aa29.35■■■□□ 2.29
LYSMD2-202ENST00000454181 BRCA2P51587 3418 aa29.34■■■□□ 2.29
LYSMD2-202ENST00000454181 DDTLA6NHG4 134 aaPredicted RBP29.34■■■□□ 2.29
LYSMD2-202ENST00000454181 H0YGN5 161 aa29.34■■■□□ 2.29
LYSMD2-202ENST00000454181 PRKCZQ05513 592 aa29.34■■■□□ 2.29
LYSMD2-202ENST00000454181 SMCR8Q8TEV9 937 aaPredicted RBP29.34■■■□□ 2.29
LYSMD2-202ENST00000454181 ARHGAP45Q92619 1136 aa29.34■■■□□ 2.29
LYSMD2-202ENST00000454181 RNF208Q9H0X6 261 aa29.34■■■□□ 2.29
LYSMD2-202ENST00000454181 COLQQ9Y215 455 aaPredicted RBP29.34■■■□□ 2.29
LYSMD2-202ENST00000454181 MROH7-TTC4A0A0A0MT08 1334 aa29.34■■■□□ 2.29
LYSMD2-202ENST00000454181 CCL5P13501 91 aa29.33■■■□□ 2.29
LYSMD2-202ENST00000454181 RARSP54136 660 aaKnown RBP29.33■■■□□ 2.29
LYSMD2-202ENST00000454181 GSTO1P78417 241 aa29.33■■■□□ 2.29
LYSMD2-202ENST00000454181 MAP3K10Q02779 954 aa29.33■■■□□ 2.29
LYSMD2-202ENST00000454181 SLC45A1Q9Y2W3 748 aa29.33■■■□□ 2.29
LYSMD2-202ENST00000454181 MYH2Q9UKX2 1941 aa29.32■■■□□ 2.28
LYSMD2-202ENST00000454181 LDHCP07864 332 aa29.32■■■□□ 2.28
LYSMD2-202ENST00000454181 GJB1P08034 283 aa29.32■■■□□ 2.28
LYSMD2-202ENST00000454181 MECOMQ03112 1051 aa29.32■■■□□ 2.28
LYSMD2-202ENST00000454181 SLAIN1Q8ND83 568 aa29.32■■■□□ 2.28
LYSMD2-202ENST00000454181 DDX4Q9NQI0 724 aaKnown RBP29.32■■■□□ 2.28
LYSMD2-202ENST00000454181 TRIM75PA6NK02 468 aa29.31■■■□□ 2.28
LYSMD2-202ENST00000454181 GPR75-ASB3A0A0A6YYF3 556 aa29.3■■■□□ 2.28
LYSMD2-202ENST00000454181 IPO8O15397 1037 aaKnown RBP29.3■■■□□ 2.28
LYSMD2-202ENST00000454181 GJA8P48165 433 aa29.3■■■□□ 2.28
LYSMD2-202ENST00000454181 SHISA4Q96DD7 197 aa29.3■■■□□ 2.28
LYSMD2-202ENST00000454181 DOCK2Q92608 1830 aa29.29■■■□□ 2.28
LYSMD2-202ENST00000454181 RFX7Q2KHR2 1363 aa29.29■■■□□ 2.28
LYSMD2-202ENST00000454181 FXR1P51114 621 aaKnown RBP eCLIP29.29■■■□□ 2.28
LYSMD2-202ENST00000454181 MTX1Q13505 466 aa29.29■■■□□ 2.28
LYSMD2-202ENST00000454181 SPATA5Q8NB90 893 aa29.29■■■□□ 2.28
LYSMD2-202ENST00000454181 HTATIP2Q9BUP3 242 aa29.29■■■□□ 2.28
LYSMD2-202ENST00000454181 XPO5Q9HAV4 1204 aaKnown RBP eCLIP29.29■■■□□ 2.28
LYSMD2-202ENST00000454181 TNPO2O14787 897 aaKnown RBP29.28■■■□□ 2.28
LYSMD2-202ENST00000454181 ADCY3O60266 1144 aa29.28■■■□□ 2.28
LYSMD2-202ENST00000454181 MAP4K4O95819 1239 aaPredicted RBP29.28■■■□□ 2.28
LYSMD2-202ENST00000454181 RAI14Q9P0K7 980 aa29.28■■■□□ 2.28
LYSMD2-202ENST00000454181 HMG20BQ9P0W2 317 aa29.28■■■□□ 2.28
LYSMD2-202ENST00000454181 GABRQQ9UN88 632 aa29.28■■■□□ 2.28
LYSMD2-202ENST00000454181 TBC1D12O60347 775 aa29.27■■■□□ 2.28
LYSMD2-202ENST00000454181 NPM3O75607 178 aaKnown RBP29.27■■■□□ 2.28
LYSMD2-202ENST00000454181 SLURP2P0DP57 97 aa29.27■■■□□ 2.28
LYSMD2-202ENST00000454181 G3BP1Q13283 466 aaKnown RBP eCLIP29.27■■■□□ 2.28
LYSMD2-202ENST00000454181 PNMA3Q9UL41 463 aa29.27■■■□□ 2.28
LYSMD2-202ENST00000454181 CEP290O15078 2479 aa29.26■■■□□ 2.27
LYSMD2-202ENST00000454181 GNAI2P04899 355 aa29.26■■■□□ 2.27
LYSMD2-202ENST00000454181 FLT3LGP49771 235 aa29.26■■■□□ 2.27
LYSMD2-202ENST00000454181 RHBDL3P58872 404 aa29.26■■■□□ 2.27
LYSMD2-202ENST00000454181 NOL10Q9BSC4 688 aaKnown RBP29.26■■■□□ 2.27
LYSMD2-202ENST00000454181 AGTPBP1Q9UPW5 1226 aa29.26■■■□□ 2.27
LYSMD2-202ENST00000454181 TBC1D9Q6ZT07 1266 aa29.25■■■□□ 2.27
LYSMD2-202ENST00000454181 U2AF1L4Q8WU68 220 aaKnown RBP29.25■■■□□ 2.27
LYSMD2-202ENST00000454181 COA7Q96BR5 231 aa29.25■■■□□ 2.27
LYSMD2-202ENST00000454181 OSBPL5Q9H0X9 879 aaPredicted RBP29.25■■■□□ 2.27
LYSMD2-202ENST00000454181 LRP2BPQ9P2M1 347 aa29.25■■■□□ 2.27
LYSMD2-202ENST00000454181 TAOK2Q9UL54 1235 aa29.25■■■□□ 2.27
LYSMD2-202ENST00000454181 CCDC84Q86UT8 332 aaPredicted RBP29.24■■■□□ 2.27
LYSMD2-202ENST00000454181 NSUN4Q96CB9 384 aaKnown RBP29.24■■■□□ 2.27
LYSMD2-202ENST00000454181 UNC93B1Q9H1C4 597 aa29.24■■■□□ 2.27
LYSMD2-202ENST00000454181 FRMD4AQ9P2Q2 1039 aaPredicted RBP29.24■■■□□ 2.27
LYSMD2-202ENST00000454181 UQCRFS1P1P0C7P4 283 aa29.23■■■□□ 2.27
LYSMD2-202ENST00000454181 CHRDL2Q6WN34 429 aa29.23■■■□□ 2.27
LYSMD2-202ENST00000454181 ANKRD13CQ8N6S4 541 aa29.23■■■□□ 2.27
LYSMD2-202ENST00000454181 PXYLP1Q8TE99 480 aa29.23■■■□□ 2.27
LYSMD2-202ENST00000454181 FRAT1Q92837 279 aaPredicted RBP29.23■■■□□ 2.27
LYSMD2-202ENST00000454181 NR2E3Q9Y5X4 410 aa29.23■■■□□ 2.27
LYSMD2-202ENST00000454181 FAM196BA6NMK8 535 aa29.22■■■□□ 2.27
LYSMD2-202ENST00000454181 FARP2O94887 1054 aaPredicted RBP29.22■■■□□ 2.27
LYSMD2-202ENST00000454181 ELNP15502 786 aa29.22■■■□□ 2.27
LYSMD2-202ENST00000454181 SPP2Q13103 211 aa29.22■■■□□ 2.27
LYSMD2-202ENST00000454181 PABPC4Q13310 644 aaKnown RBP eCLIP29.22■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms