RNA–Protein interactions for RNA: ENST00000453954.6

TCF3-204, Transcript of transcription factor 3, humanhuman

TSL 5 BASIC

Gene TCF3, Length 3,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-204ENST00000453954 SCARF1Q14162 830 aa19.71■□□□□ 0.75
TCF3-204ENST00000453954 SLC35F6Q8N357 371 aa19.71■□□□□ 0.75
TCF3-204ENST00000453954 BLZF1Q9H2G9 400 aa19.71■□□□□ 0.75
TCF3-204ENST00000453954 COPRSQ9NQ92 184 aa19.71■□□□□ 0.75
TCF3-204ENST00000453954 TATP17735 454 aaPredicted RBP19.7■□□□□ 0.74
TCF3-204ENST00000453954 DHX8Q14562 1220 aaKnown RBP19.7■□□□□ 0.74
TCF3-204ENST00000453954 USPL1Q5W0Q7 1092 aa19.7■□□□□ 0.74
TCF3-204ENST00000453954 MICALL1Q8N3F8 863 aa19.7■□□□□ 0.74
TCF3-204ENST00000453954 CTAGE15A4D2H0 777 aa19.7■□□□□ 0.74
TCF3-204ENST00000453954 CTAGE8P0CG41 777 aa19.7■□□□□ 0.74
TCF3-204ENST00000453954 SLC39A14Q15043 492 aa19.7■□□□□ 0.74
TCF3-204ENST00000453954 CTAGE6Q86UF2 777 aa19.7■□□□□ 0.74
TCF3-204ENST00000453954 CTAGE4Q8IX94 777 aa19.7■□□□□ 0.74
TCF3-204ENST00000453954 RIN2Q8WYP3 895 aaPredicted RBP19.7■□□□□ 0.74
TCF3-204ENST00000453954 EXOSC10Q01780 885 aaKnown RBP19.7■□□□□ 0.74
TCF3-204ENST00000453954 METTL16Q86W50 562 aaKnown RBP19.7■□□□□ 0.74
TCF3-204ENST00000453954 HELLSQ9NRZ9 838 aa19.7■□□□□ 0.74
TCF3-204ENST00000453954 CTAGE9A4FU28 777 aa19.69■□□□□ 0.74
TCF3-204ENST00000453954 POSTNQ15063 836 aa19.69■□□□□ 0.74
TCF3-204ENST00000453954 ZMYM1Q5SVZ6 1142 aa19.69■□□□□ 0.74
TCF3-204ENST00000453954 AIDAQ96BJ3 306 aa19.69■□□□□ 0.74
TCF3-204ENST00000453954 POLR3EQ9NVU0 708 aa19.69■□□□□ 0.74
TCF3-204ENST00000453954 AXIN2Q9Y2T1 843 aa19.69■□□□□ 0.74
TCF3-204ENST00000453954 TXLNAP40222 546 aa19.69■□□□□ 0.74
TCF3-204ENST00000453954 SSRP1Q08945 709 aaKnown RBP19.69■□□□□ 0.74
TCF3-204ENST00000453954 RBL2Q08999 1139 aa19.69■□□□□ 0.74
TCF3-204ENST00000453954 SART3Q15020 963 aaKnown RBP19.69■□□□□ 0.74
TCF3-204ENST00000453954 TSR1Q2NL82 804 aaKnown RBP19.69■□□□□ 0.74
TCF3-204ENST00000453954 CCDC93Q567U6 631 aa19.69■□□□□ 0.74
TCF3-204ENST00000453954 FOXP4Q8IVH2 680 aaPredicted RBP19.69■□□□□ 0.74
TCF3-204ENST00000453954 DIS3L2Q8IYB7 885 aaKnown RBP19.69■□□□□ 0.74
TCF3-204ENST00000453954 CASP14P31944 242 aa19.69■□□□□ 0.74
TCF3-204ENST00000453954 SNAP23O00161 211 aa19.68■□□□□ 0.74
TCF3-204ENST00000453954 SNRPA1P09661 255 aaKnown RBP19.68■□□□□ 0.74
TCF3-204ENST00000453954 KRI1Q8N9T8 703 aaKnown RBP19.68■□□□□ 0.74
TCF3-204ENST00000453954 XAGE2Q96GT9 111 aa19.68■□□□□ 0.74
TCF3-204ENST00000453954 DSCC1Q9BVC3 393 aa19.68■□□□□ 0.74
TCF3-204ENST00000453954 BABAM1Q9NWV8 329 aa19.68■□□□□ 0.74
TCF3-204ENST00000453954 TDO2P48775 406 aa19.68■□□□□ 0.74
TCF3-204ENST00000453954 TRIM22Q8IYM9 498 aa19.68■□□□□ 0.74
TCF3-204ENST00000453954 SMARCC1Q92922 1105 aaPredicted RBP19.68■□□□□ 0.74
TCF3-204ENST00000453954 FAM107BQ9H098 131 aa19.68■□□□□ 0.74
TCF3-204ENST00000453954 CWC25Q9NXE8 425 aaPredicted RBP19.68■□□□□ 0.74
TCF3-204ENST00000453954 NAP1L1P55209 391 aaKnown RBP19.68■□□□□ 0.74
TCF3-204ENST00000453954 IRX3P78415 501 aaPredicted RBP19.68■□□□□ 0.74
TCF3-204ENST00000453954 HDXQ7Z353 690 aa19.68■□□□□ 0.74
TCF3-204ENST00000453954 TAB2Q9NYJ8 693 aa19.68■□□□□ 0.74
TCF3-204ENST00000453954 TMEM2Q9UHN6 1383 aa19.67■□□□□ 0.74
TCF3-204ENST00000453954 TSGA10IPQ3SY00 556 aa19.67■□□□□ 0.74
TCF3-204ENST00000453954 ATL3Q6DD88 541 aa19.67■□□□□ 0.74
TCF3-204ENST00000453954 SYNE4Q8N205 404 aa19.67■□□□□ 0.74
TCF3-204ENST00000453954 CENPHQ9H3R5 247 aa19.67■□□□□ 0.74
TCF3-204ENST00000453954 MAN1B1Q9UKM7 699 aa19.67■□□□□ 0.74
TCF3-204ENST00000453954 SRGAP2O75044 1071 aa19.67■□□□□ 0.74
TCF3-204ENST00000453954 ZRANB2O95218 330 aaKnown RBP eCLIP19.67■□□□□ 0.742e-6■■■■■ 27.5
TCF3-204ENST00000453954 PNKPQ96T60 521 aa19.67■□□□□ 0.74
TCF3-204ENST00000453954 USP31Q70CQ4 1352 aa19.67■□□□□ 0.74
TCF3-204ENST00000453954 CDKL5O76039 1030 aa19.67■□□□□ 0.74
TCF3-204ENST00000453954 PAXIP1Q6ZW49 1069 aaPredicted RBP19.67■□□□□ 0.74
TCF3-204ENST00000453954 NAPBQ9H115 298 aa19.67■□□□□ 0.74
TCF3-204ENST00000453954 FAM170AA1A519 330 aa19.66■□□□□ 0.74
TCF3-204ENST00000453954 ERICH2A1L162 156 aa19.66■□□□□ 0.74
TCF3-204ENST00000453954 CTR9Q6PD62 1173 aa19.66■□□□□ 0.74
TCF3-204ENST00000453954 CRACR2AQ9BSW2 395 aa19.66■□□□□ 0.74
TCF3-204ENST00000453954 ANGEL1Q9UNK9 670 aaKnown RBP19.66■□□□□ 0.74
TCF3-204ENST00000453954 PRDM1O75626 825 aa19.66■□□□□ 0.74
TCF3-204ENST00000453954 ABL1P00519 1130 aa19.66■□□□□ 0.74
TCF3-204ENST00000453954 LDHAL6AQ6ZMR3 332 aa19.66■□□□□ 0.74
TCF3-204ENST00000453954 KIAA1328Q86T90 577 aa19.66■□□□□ 0.74
TCF3-204ENST00000453954 MIGA1Q8NAN2 632 aa19.66■□□□□ 0.74
TCF3-204ENST00000453954 FUT8Q9BYC5 575 aa19.66■□□□□ 0.74
TCF3-204ENST00000453954 TSPYL1Q9H0U9 437 aa19.66■□□□□ 0.74
TCF3-204ENST00000453954 FAM204AQ9H8W3 233 aa19.66■□□□□ 0.74
TCF3-204ENST00000453954 CTNND2Q9UQB3 1225 aa19.66■□□□□ 0.74
TCF3-204ENST00000453954 ACTN2P35609 894 aa19.65■□□□□ 0.74
TCF3-204ENST00000453954 TTC31Q49AM3 519 aaPredicted RBP19.65■□□□□ 0.74
TCF3-204ENST00000453954 RABGGTAQ92696 567 aa19.65■□□□□ 0.74
TCF3-204ENST00000453954 HDAC6Q9UBN7 1215 aa19.65■□□□□ 0.74
TCF3-204ENST00000453954 TRIM10Q9UDY6 481 aa19.65■□□□□ 0.74
TCF3-204ENST00000453954 MRFAP1Q9Y605 127 aa19.65■□□□□ 0.74
TCF3-204ENST00000453954 RICTORQ6R327 1708 aa19.65■□□□□ 0.74
TCF3-204ENST00000453954 H0YHG0 523 aa19.65■□□□□ 0.74
TCF3-204ENST00000453954 EYA2O00167 538 aa19.65■□□□□ 0.74
TCF3-204ENST00000453954 IL15P40933 162 aaPredicted RBP19.65■□□□□ 0.74
TCF3-204ENST00000453954 VSNL1P62760 191 aa19.65■□□□□ 0.74
TCF3-204ENST00000453954 RRAGBQ5VZM2 374 aa19.65■□□□□ 0.74
TCF3-204ENST00000453954 GUCY1A2P33402 732 aa19.65■□□□□ 0.74
TCF3-204ENST00000453954 PDIA6Q15084 440 aa19.65■□□□□ 0.74
TCF3-204ENST00000453954 ZNF174Q15697 407 aa19.65■□□□□ 0.74
TCF3-204ENST00000453954 NUTM2AQ8IVF1 878 aaPredicted RBP19.65■□□□□ 0.74
TCF3-204ENST00000453954 SF3A3Q12874 501 aaKnown RBP eCLIP19.64■□□□□ 0.747e-7■■■■■ 32.5
TCF3-204ENST00000453954 ENOX2Q16206 610 aaKnown RBP19.64■□□□□ 0.74
TCF3-204ENST00000453954 CYB5R4Q7L1T6 521 aa19.64■□□□□ 0.74
TCF3-204ENST00000453954 TC2NQ8N9U0 490 aa19.64■□□□□ 0.74
TCF3-204ENST00000453954 JADE2Q9NQC1 790 aa19.64■□□□□ 0.74
TCF3-204ENST00000453954 DACH1Q9UI36 760 aa19.64■□□□□ 0.74
TCF3-204ENST00000453954 PCDHB6Q9Y5E3 794 aa19.64■□□□□ 0.74
TCF3-204ENST00000453954 GOLGA6L9A6NEM1 432 aa19.64■□□□□ 0.73
TCF3-204ENST00000453954 IKBKBO14920 756 aa19.64■□□□□ 0.73
TCF3-204ENST00000453954 RAD9BQ6WBX8 426 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms