RNA–Protein interactions for RNA: ENST00000453536.5

RFTN1-207, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 5

Gene RFTN1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-207ENST00000453536 PDS5AQ29RF7 1337 aaKnown RBP17.35■□□□□ 0.37
RFTN1-207ENST00000453536 CYP2E1P05181 493 aaPredicted RBP17.34■□□□□ 0.37
RFTN1-207ENST00000453536 TTC39AQ5SRH9 613 aa17.34■□□□□ 0.37
RFTN1-207ENST00000453536 REM2Q8IYK8 340 aaPredicted RBP17.34■□□□□ 0.37
RFTN1-207ENST00000453536 CD99L2Q8TCZ2 262 aa17.34■□□□□ 0.37
RFTN1-207ENST00000453536 RCAN3Q9UKA8 241 aa17.34■□□□□ 0.37
RFTN1-207ENST00000453536 NOP58Q9Y2X3 529 aaKnown RBP17.34■□□□□ 0.37
RFTN1-207ENST00000453536 CSADQ9Y600 493 aa17.34■□□□□ 0.37
RFTN1-207ENST00000453536 TESPA1A2RU30 521 aaPredicted RBP17.33■□□□□ 0.36
RFTN1-207ENST00000453536 SHROOM1Q2M3G4 852 aaPredicted RBP17.33■□□□□ 0.36
RFTN1-207ENST00000453536 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.33■□□□□ 0.36
RFTN1-207ENST00000453536 SH3RF3Q8TEJ3 882 aaPredicted RBP17.33■□□□□ 0.36
RFTN1-207ENST00000453536 ZNF341Q9BYN7 854 aa17.33■□□□□ 0.36
RFTN1-207ENST00000453536 ANTXR1Q9H6X2 564 aa17.33■□□□□ 0.36
RFTN1-207ENST00000453536 HPS5Q9UPZ3 1129 aa17.33■□□□□ 0.36
RFTN1-207ENST00000453536 GPR75-ASB3A0A0A6YYF3 556 aa17.32■□□□□ 0.36
RFTN1-207ENST00000453536 FKTNO75072 461 aa17.32■□□□□ 0.36
RFTN1-207ENST00000453536 RRP1BQ14684 758 aaKnown RBP17.32■□□□□ 0.36
RFTN1-207ENST00000453536 SLC4A8Q2Y0W8 1093 aa17.32■□□□□ 0.36
RFTN1-207ENST00000453536 CFHR5Q9BXR6 569 aa17.32■□□□□ 0.36
RFTN1-207ENST00000453536 IDI2Q9BXS1 227 aa17.32■□□□□ 0.36
RFTN1-207ENST00000453536 MYH1P12882 1939 aa17.31■□□□□ 0.36
RFTN1-207ENST00000453536 PHF20L1A8MW92 1017 aa17.31■□□□□ 0.36
RFTN1-207ENST00000453536 BTBD19C9JJ37 291 aa17.31■□□□□ 0.36
RFTN1-207ENST00000453536 ZBTB22O15209 634 aa17.31■□□□□ 0.36
RFTN1-207ENST00000453536 DYNLL1P63167 89 aaKnown RBP17.31■□□□□ 0.36
RFTN1-207ENST00000453536 MOGSQ13724 837 aa17.31■□□□□ 0.36
RFTN1-207ENST00000453536 ZSCAN29Q8IWY8 852 aaPredicted RBP17.31■□□□□ 0.36
RFTN1-207ENST00000453536 ZGPATQ8N5A5 531 aaKnown RBP17.31■□□□□ 0.36
RFTN1-207ENST00000453536 ARHGAP39Q9C0H5 1083 aa17.31■□□□□ 0.36
RFTN1-207ENST00000453536 AATFQ9NY61 560 aaKnown RBP eCLIP17.31■□□□□ 0.36
RFTN1-207ENST00000453536 ZNF112Q9UJU3 913 aa17.31■□□□□ 0.36
RFTN1-207ENST00000453536 MKI67P46013 3256 aaKnown RBP17.3■□□□□ 0.36
RFTN1-207ENST00000453536 DCAF15Q66K64 600 aa17.3■□□□□ 0.36
RFTN1-207ENST00000453536 AACSQ86V21 672 aa17.3■□□□□ 0.36
RFTN1-207ENST00000453536 ERO1BQ86YB8 467 aa17.3■□□□□ 0.36
RFTN1-207ENST00000453536 FAM163AQ96GL9 167 aaPredicted RBP17.3■□□□□ 0.36
RFTN1-207ENST00000453536 GPR108Q9NPR9 543 aa17.3■□□□□ 0.36
RFTN1-207ENST00000453536 ZBTB40Q9NUA8 1239 aa17.3■□□□□ 0.36
RFTN1-207ENST00000453536 LRP2BPQ9P2M1 347 aa17.3■□□□□ 0.36
RFTN1-207ENST00000453536 UQCRFS1P1P0C7P4 283 aa17.29■□□□□ 0.36
RFTN1-207ENST00000453536 TAF1CQ15572 869 aaPredicted RBP17.29■□□□□ 0.36
RFTN1-207ENST00000453536 SLFNL1Q499Z3 407 aa17.29■□□□□ 0.36
RFTN1-207ENST00000453536 SPTY2D1Q68D10 685 aaPredicted RBP17.29■□□□□ 0.36
RFTN1-207ENST00000453536 OTOP1Q7RTM1 612 aa17.29■□□□□ 0.36
RFTN1-207ENST00000453536 EDC3Q96F86 508 aaKnown RBP17.29■□□□□ 0.36
RFTN1-207ENST00000453536 TRIM17Q9Y577 477 aa17.29■□□□□ 0.36
RFTN1-207ENST00000453536 DDX60LQ5H9U9 1706 aaKnown RBP17.28■□□□□ 0.36
RFTN1-207ENST00000453536 UNCXA6NJT0 531 aa17.28■□□□□ 0.36
RFTN1-207ENST00000453536 ENTPD3O75355 529 aa17.28■□□□□ 0.36
RFTN1-207ENST00000453536 CHGBP05060 677 aa17.28■□□□□ 0.36
RFTN1-207ENST00000453536 CTGFP29279 349 aa17.28■□□□□ 0.36
RFTN1-207ENST00000453536 GTF2A2P52657 109 aa17.28■□□□□ 0.36
RFTN1-207ENST00000453536 JAG1P78504 1218 aa17.28■□□□□ 0.36
RFTN1-207ENST00000453536 EVX2Q03828 476 aa17.28■□□□□ 0.36
RFTN1-207ENST00000453536 PPIL2Q13356 520 aa17.28■□□□□ 0.36
RFTN1-207ENST00000453536 MGAMO43451 1857 aa17.28■□□□□ 0.36
RFTN1-207ENST00000453536 NAV1Q8NEY1 1877 aa17.27■□□□□ 0.36
RFTN1-207ENST00000453536 ALDH1A1P00352 501 aa17.27■□□□□ 0.36
RFTN1-207ENST00000453536 INHBEP58166 350 aa17.27■□□□□ 0.36
RFTN1-207ENST00000453536 CCDC158Q5M9N0 1113 aa17.27■□□□□ 0.36
RFTN1-207ENST00000453536 NAA16Q6N069 864 aaPredicted RBP17.27■□□□□ 0.36
RFTN1-207ENST00000453536 MAPKAPK5Q8IW41 473 aa17.27■□□□□ 0.36
RFTN1-207ENST00000453536 TEX11Q8IYF3 940 aa17.27■□□□□ 0.36
RFTN1-207ENST00000453536 MIGA1Q8NAN2 632 aa17.27■□□□□ 0.36
RFTN1-207ENST00000453536 RHPN1Q8TCX5 695 aa17.27■□□□□ 0.36
RFTN1-207ENST00000453536 SMARCA5O60264 1052 aaPredicted RBP17.26■□□□□ 0.35
RFTN1-207ENST00000453536 NOL9Q5SY16 702 aaKnown RBP17.26■□□□□ 0.35
RFTN1-207ENST00000453536 OSBPL5Q9H0X9 879 aaPredicted RBP17.26■□□□□ 0.35
RFTN1-207ENST00000453536 DNAJC18Q9H819 358 aa17.26■□□□□ 0.35
RFTN1-207ENST00000453536 SAP30BPQ9UHR5 308 aaKnown RBP17.26■□□□□ 0.35
RFTN1-207ENST00000453536 CPA4Q9UI42 421 aa17.26■□□□□ 0.35
RFTN1-207ENST00000453536 MYH7P12883 1935 aa17.25■□□□□ 0.35
RFTN1-207ENST00000453536 LOC285556D6RIA3 1793 aa17.25■□□□□ 0.35
RFTN1-207ENST00000453536 PPATQ06203 517 aa17.25■□□□□ 0.35
RFTN1-207ENST00000453536 SNAPC2Q13487 334 aa17.25■□□□□ 0.35
RFTN1-207ENST00000453536 NOM1Q5C9Z4 860 aaKnown RBP17.25■□□□□ 0.35
RFTN1-207ENST00000453536 TGFBRAP1Q8WUH2 860 aa17.25■□□□□ 0.35
RFTN1-207ENST00000453536 YTHDC1Q96MU7 727 aaKnown RBP17.25■□□□□ 0.35
RFTN1-207ENST00000453536 BAZ2AQ9UIF9 1905 aaKnown RBP17.24■□□□□ 0.35
RFTN1-207ENST00000453536 IDH1O75874 414 aaKnown RBP17.24■□□□□ 0.35
RFTN1-207ENST00000453536 CYP2C8P10632 490 aa17.24■□□□□ 0.35
RFTN1-207ENST00000453536 CETPP11597 493 aa17.24■□□□□ 0.35
RFTN1-207ENST00000453536 PTPRAP18433 802 aa17.24■□□□□ 0.35
RFTN1-207ENST00000453536 SP3Q02447 781 aa17.24■□□□□ 0.35
RFTN1-207ENST00000453536 GPAT2Q6NUI2 795 aa17.24■□□□□ 0.35
RFTN1-207ENST00000453536 FBXO46Q6PJ61 603 aaPredicted RBP17.24■□□□□ 0.35
RFTN1-207ENST00000453536 SCYL3Q8IZE3 742 aa17.24■□□□□ 0.35
RFTN1-207ENST00000453536 MAGEB6Q8N7X4 407 aa17.24■□□□□ 0.35
RFTN1-207ENST00000453536 DDX19BQ9UMR2 479 aa17.24■□□□□ 0.35
RFTN1-207ENST00000453536 KCNH4Q9UQ05 1017 aa17.24■□□□□ 0.35
RFTN1-207ENST00000453536 ZHX2Q9Y6X8 837 aa17.24■□□□□ 0.35
RFTN1-207ENST00000453536 DOCK3Q8IZD9 2030 aa17.24■□□□□ 0.35
RFTN1-207ENST00000453536 FLT1P17948 1338 aa17.23■□□□□ 0.35
RFTN1-207ENST00000453536 ADGRA2Q96PE1 1338 aa17.23■□□□□ 0.35
RFTN1-207ENST00000453536 KIAA0100Q14667 2235 aaKnown RBP17.23■□□□□ 0.35
RFTN1-207ENST00000453536 PDHXO00330 501 aa17.23■□□□□ 0.35
RFTN1-207ENST00000453536 CYP7A1P22680 504 aa17.23■□□□□ 0.35
RFTN1-207ENST00000453536 MAP3K10Q02779 954 aa17.23■□□□□ 0.35
RFTN1-207ENST00000453536 SLF2Q8IX21 1173 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms