RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 USP5P45974 858 aa10.72□□□□□ -0.69
COL8A1-203ENST00000452013 DYNLL1P63167 89 aaKnown RBP10.72□□□□□ -0.69
COL8A1-203ENST00000452013 MAP2K1Q02750 393 aaPredicted RBP10.72□□□□□ -0.69
COL8A1-203ENST00000452013 TSHZ3Q63HK5 1081 aa10.72□□□□□ -0.69
COL8A1-203ENST00000452013 MIGA2Q7L4E1 593 aa10.72□□□□□ -0.69
COL8A1-203ENST00000452013 ADGRA1Q86SQ6 560 aa10.72□□□□□ -0.69
COL8A1-203ENST00000452013 MIGA1Q8NAN2 632 aa10.72□□□□□ -0.69
COL8A1-203ENST00000452013 PI4K2BQ8TCG2 481 aa10.72□□□□□ -0.69
COL8A1-203ENST00000452013 CSRNP1Q96S65 589 aa10.72□□□□□ -0.69
COL8A1-203ENST00000452013 CRNKL1Q9BZJ0 848 aaKnown RBP10.72□□□□□ -0.69
COL8A1-203ENST00000452013 CSADQ9Y600 493 aa10.72□□□□□ -0.69
COL8A1-203ENST00000452013 PSME4Q14997 1843 aa10.72□□□□□ -0.69
COL8A1-203ENST00000452013 TCRBV5S4A2TA0A5A2 114 aa10.71□□□□□ -0.69
COL8A1-203ENST00000452013 RNF113AO15541 343 aaKnown RBP10.71□□□□□ -0.69
COL8A1-203ENST00000452013 TBC1D12O60347 775 aa10.71□□□□□ -0.69
COL8A1-203ENST00000452013 TICAM2Q86XR7 235 aa10.71□□□□□ -0.69
COL8A1-203ENST00000452013 FOXP4Q8IVH2 680 aaPredicted RBP10.71□□□□□ -0.69
COL8A1-203ENST00000452013 CDAN1Q8IWY9 1227 aa10.71□□□□□ -0.69
COL8A1-203ENST00000452013 EVI5LQ96CN4 794 aa10.71□□□□□ -0.69
COL8A1-203ENST00000452013 RIOK1Q9BRS2 568 aaKnown RBP10.71□□□□□ -0.69
COL8A1-203ENST00000452013 BEGAINQ9BUH8 593 aa10.71□□□□□ -0.69
COL8A1-203ENST00000452013 RPAP1Q9BWH6 1393 aaPredicted RBP10.71□□□□□ -0.69
COL8A1-203ENST00000452013 SALL3Q9BXA9 1300 aa10.71□□□□□ -0.69
COL8A1-203ENST00000452013 OSBPL5Q9H0X9 879 aaPredicted RBP10.71□□□□□ -0.69
COL8A1-203ENST00000452013 DDX4Q9NQI0 724 aaKnown RBP10.71□□□□□ -0.69
COL8A1-203ENST00000452013 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.71□□□□□ -0.69
COL8A1-203ENST00000452013 PI4KBQ9UBF8 816 aa10.71□□□□□ -0.69
COL8A1-203ENST00000452013 FZD1Q9UP38 647 aa10.71□□□□□ -0.69
COL8A1-203ENST00000452013 ARAP2Q8WZ64 1704 aa10.7□□□□□ -0.7
COL8A1-203ENST00000452013 DDTLA6NHG4 134 aaPredicted RBP10.7□□□□□ -0.7
COL8A1-203ENST00000452013 FAM155AB1AL88 458 aaPredicted RBP10.7□□□□□ -0.7
COL8A1-203ENST00000452013 AOC2O75106 756 aa10.7□□□□□ -0.7
COL8A1-203ENST00000452013 HLA-DOAP06340 250 aa10.7□□□□□ -0.7
COL8A1-203ENST00000452013 SLC10A3P09131 477 aa10.7□□□□□ -0.7
COL8A1-203ENST00000452013 INHBEP58166 350 aa10.7□□□□□ -0.7
COL8A1-203ENST00000452013 KIF23Q02241 960 aaPredicted RBP10.7□□□□□ -0.7
COL8A1-203ENST00000452013 MAP3K10Q02779 954 aa10.7□□□□□ -0.7
COL8A1-203ENST00000452013 SH3BP5LQ7L8J4 393 aa10.7□□□□□ -0.7
COL8A1-203ENST00000452013 TTC6Q86TZ1 520 aa10.7□□□□□ -0.7
COL8A1-203ENST00000452013 RASAL3Q86YV0 1011 aa10.7□□□□□ -0.7
COL8A1-203ENST00000452013 MAPKAPK5Q8IW41 473 aa10.7□□□□□ -0.7
COL8A1-203ENST00000452013 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.7□□□□□ -0.7
COL8A1-203ENST00000452013 AIDAQ96BJ3 306 aa10.7□□□□□ -0.7
COL8A1-203ENST00000452013 DDRGK1Q96HY6 314 aa10.7□□□□□ -0.7
COL8A1-203ENST00000452013 WRNIP1Q96S55 665 aa10.7□□□□□ -0.7
COL8A1-203ENST00000452013 FSD1Q9BTV5 496 aa10.7□□□□□ -0.7
COL8A1-203ENST00000452013 OSBPL3Q9H4L5 887 aa10.7□□□□□ -0.7
COL8A1-203ENST00000452013 TSHZ2Q9NRE2 1034 aa10.7□□□□□ -0.7
COL8A1-203ENST00000452013 ZNF112Q9UJU3 913 aa10.7□□□□□ -0.7
COL8A1-203ENST00000452013 TRIM6-TRIM34B2RNG4 842 aa10.69□□□□□ -0.7
COL8A1-203ENST00000452013 SPRYD7Q5W111 196 aa10.69□□□□□ -0.7
COL8A1-203ENST00000452013 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.69□□□□□ -0.7
COL8A1-203ENST00000452013 PLEKHM2Q8IWE5 1019 aa10.69□□□□□ -0.7
COL8A1-203ENST00000452013 APPBP2Q92624 585 aa10.69□□□□□ -0.7
COL8A1-203ENST00000452013 TRIM34Q9BYJ4 488 aa10.69□□□□□ -0.7
COL8A1-203ENST00000452013 ARMT1Q9H993 441 aa10.69□□□□□ -0.7
COL8A1-203ENST00000452013 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.69□□□□□ -0.7
COL8A1-203ENST00000452013 ATP8A2Q9NTI2 1148 aa10.69□□□□□ -0.7
COL8A1-203ENST00000452013 HERC5Q9UII4 1024 aaKnown RBP10.69□□□□□ -0.7
COL8A1-203ENST00000452013 ATRNL1Q5VV63 1379 aa10.68□□□□□ -0.7
COL8A1-203ENST00000452013 ZNF646O15015 1829 aaPredicted RBP10.68□□□□□ -0.7
COL8A1-203ENST00000452013 FLT1P17948 1338 aa10.68□□□□□ -0.7
COL8A1-203ENST00000452013 MBD4O95243 580 aa10.68□□□□□ -0.7
COL8A1-203ENST00000452013 POLR3DP05423 398 aaPredicted RBP10.68□□□□□ -0.7
COL8A1-203ENST00000452013 ZBTB48P10074 688 aaPredicted RBP10.68□□□□□ -0.7
COL8A1-203ENST00000452013 CENPQQ7L2Z9 268 aaPredicted RBP10.68□□□□□ -0.7
COL8A1-203ENST00000452013 ERO1BQ86YB8 467 aa10.68□□□□□ -0.7
COL8A1-203ENST00000452013 AMOTL1Q8IY63 956 aa10.68□□□□□ -0.7
COL8A1-203ENST00000452013 LCORLQ8N3X6 602 aa10.68□□□□□ -0.7
COL8A1-203ENST00000452013 CRACR2BQ8N4Y2 399 aaPredicted RBP10.68□□□□□ -0.7
COL8A1-203ENST00000452013 ZKSCAN4Q969J2 545 aaPredicted RBP10.68□□□□□ -0.7
COL8A1-203ENST00000452013 WNK4Q96J92 1243 aa10.68□□□□□ -0.7
COL8A1-203ENST00000452013 CLMNQ96JQ2 1002 aa10.68□□□□□ -0.7
COL8A1-203ENST00000452013 ELP3Q9H9T3 547 aa10.68□□□□□ -0.7
COL8A1-203ENST00000452013 WBP1LQ9NX94 342 aa10.68□□□□□ -0.7
COL8A1-203ENST00000452013 SAP30BPQ9UHR5 308 aaKnown RBP10.68□□□□□ -0.7
COL8A1-203ENST00000452013 PALD1Q9ULE6 856 aa10.68□□□□□ -0.7
COL8A1-203ENST00000452013 RFX7Q2KHR2 1363 aa10.67□□□□□ -0.7
COL8A1-203ENST00000452013 MANSC4A6NHS7 340 aaPredicted RBP10.67□□□□□ -0.7
COL8A1-203ENST00000452013 PHF20L1A8MW92 1017 aa10.67□□□□□ -0.7
COL8A1-203ENST00000452013 CA12O43570 354 aa10.67□□□□□ -0.7
COL8A1-203ENST00000452013 CTNND1O60716 968 aaKnown RBP10.67□□□□□ -0.7
COL8A1-203ENST00000452013 GNAT2P19087 354 aa10.67□□□□□ -0.7
COL8A1-203ENST00000452013 TM4SF4P48230 202 aa10.67□□□□□ -0.7
COL8A1-203ENST00000452013 PPATQ06203 517 aa10.67□□□□□ -0.7
COL8A1-203ENST00000452013 SREBF2Q12772 1141 aa10.67□□□□□ -0.7
COL8A1-203ENST00000452013 VGLL4Q14135 290 aa10.67□□□□□ -0.7
COL8A1-203ENST00000452013 RILPL2Q969X0 211 aa10.67□□□□□ -0.7
COL8A1-203ENST00000452013 OPTNQ96CV9 577 aa10.67□□□□□ -0.7
COL8A1-203ENST00000452013 CCDC136Q96JN2 1154 aa10.67□□□□□ -0.7
COL8A1-203ENST00000452013 STRBPQ96SI9 672 aaKnown RBP10.67□□□□□ -0.7
COL8A1-203ENST00000452013 PUS7LQ9H0K6 701 aaKnown RBP10.67□□□□□ -0.7
COL8A1-203ENST00000452013 PICK1Q9NRD5 415 aa10.67□□□□□ -0.7
COL8A1-203ENST00000452013 MCM9Q9NXL9 1143 aa10.67□□□□□ -0.7
COL8A1-203ENST00000452013 TAOK2Q9UL54 1235 aa10.67□□□□□ -0.7
COL8A1-203ENST00000452013 SLC4A4Q9Y6R1 1079 aa10.67□□□□□ -0.7
COL8A1-203ENST00000452013 SSC5DA1L4H1 1573 aa10.66□□□□□ -0.7
COL8A1-203ENST00000452013 SPDYE5A6NIY4 337 aa10.66□□□□□ -0.7
COL8A1-203ENST00000452013 PATL2C9JE40 543 aaKnown RBP10.66□□□□□ -0.7
COL8A1-203ENST00000452013 HSPA1AP0DMV8 641 aaKnown RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms