RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 MLXIPQ9HAP2 919 aa6.52□□□□□ -1.37
CDC42BPA-209ENST00000448940 SLC12A7Q9Y666 1083 aa6.52□□□□□ -1.37
CDC42BPA-209ENST00000448940 ZHX2Q9Y6X8 837 aa6.52□□□□□ -1.37
CDC42BPA-209ENST00000448940 SPDYE3A6NKU9 549 aa6.51□□□□□ -1.37
CDC42BPA-209ENST00000448940 ELF1P32519 619 aa6.51□□□□□ -1.37
CDC42BPA-209ENST00000448940 SYCP1Q15431 976 aa6.51□□□□□ -1.37
CDC42BPA-209ENST00000448940 AAK1Q2M2I8 961 aa6.51□□□□□ -1.37
CDC42BPA-209ENST00000448940 SUGP1Q8IWZ8 645 aaKnown RBP6.51□□□□□ -1.37
CDC42BPA-209ENST00000448940 SPATA5Q8NB90 893 aa6.51□□□□□ -1.37
CDC42BPA-209ENST00000448940 EVI5LQ96CN4 794 aa6.51□□□□□ -1.37
CDC42BPA-209ENST00000448940 BICD1Q96G01 975 aa6.51□□□□□ -1.37
CDC42BPA-209ENST00000448940 ZBTB12Q9Y330 459 aaPredicted RBP6.51□□□□□ -1.37
CDC42BPA-209ENST00000448940 ATP6V1DQ9Y5K8 247 aa6.51□□□□□ -1.37
CDC42BPA-209ENST00000448940 CROCC2H7BZ55 1655 aa6.51□□□□□ -1.37
CDC42BPA-209ENST00000448940 NEURL4Q96JN8 1562 aa6.51□□□□□ -1.37
CDC42BPA-209ENST00000448940 PNPLA7Q6ZV29 1317 aa6.51□□□□□ -1.37
CDC42BPA-209ENST00000448940 KIF4AO95239 1232 aa6.51□□□□□ -1.37
CDC42BPA-209ENST00000448940 CCDC85BQ15834 202 aaPredicted RBP6.51□□□□□ -1.37
CDC42BPA-209ENST00000448940 BLOC1S2Q6QNY1 142 aa6.51□□□□□ -1.37
CDC42BPA-209ENST00000448940 NDUFB9Q9Y6M9 179 aa6.51□□□□□ -1.37
CDC42BPA-209ENST00000448940 DISP2A7MBM2 1401 aa6.51□□□□□ -1.37
CDC42BPA-209ENST00000448940 NEXMIFQ5QGS0 1516 aa6.51□□□□□ -1.37
CDC42BPA-209ENST00000448940 COL5A2P05997 1499 aaPredicted RBP6.51□□□□□ -1.37
CDC42BPA-209ENST00000448940 UPP2O95045 317 aa6.51□□□□□ -1.37
CDC42BPA-209ENST00000448940 BAG4O95429 457 aaKnown RBP6.51□□□□□ -1.37
CDC42BPA-209ENST00000448940 PSMD2Q13200 908 aa6.51□□□□□ -1.37
CDC42BPA-209ENST00000448940 GCNAQ96QF7 691 aa6.51□□□□□ -1.37
CDC42BPA-209ENST00000448940 CNNM2Q9H8M5 875 aa6.51□□□□□ -1.37
CDC42BPA-209ENST00000448940 TMEM39AQ9NV64 488 aa6.51□□□□□ -1.37
CDC42BPA-209ENST00000448940 PAG1Q9NWQ8 432 aa6.51□□□□□ -1.37
CDC42BPA-209ENST00000448940 PDE8BO95263 885 aa6.51□□□□□ -1.37
CDC42BPA-209ENST00000448940 MMP14P50281 582 aa6.51□□□□□ -1.37
CDC42BPA-209ENST00000448940 SCARF1Q14162 830 aa6.51□□□□□ -1.37
CDC42BPA-209ENST00000448940 STRIP1Q5VSL9 837 aa6.51□□□□□ -1.37
CDC42BPA-209ENST00000448940 SAMD7Q7Z3H4 446 aa6.51□□□□□ -1.37
CDC42BPA-209ENST00000448940 RNF180Q86T96 592 aa6.51□□□□□ -1.37
CDC42BPA-209ENST00000448940 C7orf61Q8IZ16 206 aa6.51□□□□□ -1.37
CDC42BPA-209ENST00000448940 CELF1Q92879 486 aaKnown RBP6.51□□□□□ -1.37
CDC42BPA-209ENST00000448940 CAMTA2O94983 1202 aa6.51□□□□□ -1.37
CDC42BPA-209ENST00000448940 ABCB5Q2M3G0 1257 aa6.51□□□□□ -1.37
CDC42BPA-209ENST00000448940 AXDND1Q5T1B0 1012 aaPredicted RBP6.51□□□□□ -1.37
CDC42BPA-209ENST00000448940 NLGN2Q8NFZ4 835 aa6.51□□□□□ -1.37
CDC42BPA-209ENST00000448940 CCDC17Q96LX7 622 aa6.51□□□□□ -1.37
CDC42BPA-209ENST00000448940 PUF60Q9UHX1 559 aaKnown RBP6.51□□□□□ -1.37
CDC42BPA-209ENST00000448940 MBD4O95243 580 aa6.51□□□□□ -1.37
CDC42BPA-209ENST00000448940 RSBN1LQ6PCB5 846 aaPredicted RBP6.51□□□□□ -1.37
CDC42BPA-209ENST00000448940 RAB34Q9BZG1 259 aa6.51□□□□□ -1.37
CDC42BPA-209ENST00000448940 CD209Q9NNX6 404 aa6.51□□□□□ -1.37
CDC42BPA-209ENST00000448940 ZBTB21Q9ULJ3 1066 aa6.51□□□□□ -1.37
CDC42BPA-209ENST00000448940 ICA1Q05084 483 aa6.5□□□□□ -1.37
CDC42BPA-209ENST00000448940 G2E3Q7L622 706 aa6.5□□□□□ -1.37
CDC42BPA-209ENST00000448940 TDRD3Q9H7E2 651 aaKnown RBP6.5□□□□□ -1.37
CDC42BPA-209ENST00000448940 CCDC194A0A1B0GVG4 234 aa6.5□□□□□ -1.37
CDC42BPA-209ENST00000448940 SRGNP10124 158 aa6.5□□□□□ -1.37
CDC42BPA-209ENST00000448940 RARBP10826 455 aa6.5□□□□□ -1.37
CDC42BPA-209ENST00000448940 GTF2A2P52657 109 aa6.5□□□□□ -1.37
CDC42BPA-209ENST00000448940 HTRA3P83110 453 aa6.5□□□□□ -1.37
CDC42BPA-209ENST00000448940 ATP8B2P98198 1209 aa6.5□□□□□ -1.37
CDC42BPA-209ENST00000448940 SP3Q02447 781 aa6.5□□□□□ -1.37
CDC42BPA-209ENST00000448940 PGBD3Q8N328 593 aa6.5□□□□□ -1.37
CDC42BPA-209ENST00000448940 PDILTQ8N807 584 aa6.5□□□□□ -1.37
CDC42BPA-209ENST00000448940 FAM212AQ96EL1 285 aa6.5□□□□□ -1.37
CDC42BPA-209ENST00000448940 HMX1Q9NP08 348 aaPredicted RBP6.5□□□□□ -1.37
CDC42BPA-209ENST00000448940 ATRNO75882 1429 aa6.5□□□□□ -1.37
CDC42BPA-209ENST00000448940 PSMD14O00487 310 aa6.5□□□□□ -1.37
CDC42BPA-209ENST00000448940 REM2Q8IYK8 340 aaPredicted RBP6.5□□□□□ -1.37
CDC42BPA-209ENST00000448940 CEP83Q9Y592 693 aa6.5□□□□□ -1.37
CDC42BPA-209ENST00000448940 SPHKAPQ2M3C7 1700 aa6.5□□□□□ -1.37
CDC42BPA-209ENST00000448940 PTPRZ1P23471 2315 aaPredicted RBP6.5□□□□□ -1.37
CDC42BPA-209ENST00000448940 DPYSL4O14531 572 aa6.5□□□□□ -1.37
CDC42BPA-209ENST00000448940 NBPF10Q6P3W6 841 aaKnown RBP6.5□□□□□ -1.37
CDC42BPA-209ENST00000448940 FOXP4Q8IVH2 680 aaPredicted RBP6.5□□□□□ -1.37
CDC42BPA-209ENST00000448940 TMTC2Q8N394 836 aa6.5□□□□□ -1.37
CDC42BPA-209ENST00000448940 METTL13Q8N6R0 699 aa6.5□□□□□ -1.37
CDC42BPA-209ENST00000448940 SUCLG2Q96I99 432 aa6.5□□□□□ -1.37
CDC42BPA-209ENST00000448940 NUDT12Q9BQG2 462 aa6.5□□□□□ -1.37
CDC42BPA-209ENST00000448940 HOOK1Q9UJC3 728 aaKnown RBP6.5□□□□□ -1.37
CDC42BPA-209ENST00000448940 CYP46A1Q9Y6A2 500 aa6.5□□□□□ -1.37
CDC42BPA-209ENST00000448940 PPFIA3O75145 1194 aa6.5□□□□□ -1.37
CDC42BPA-209ENST00000448940 KIF20AO95235 890 aa6.5□□□□□ -1.37
CDC42BPA-209ENST00000448940 CRKP46108 304 aa6.5□□□□□ -1.37
CDC42BPA-209ENST00000448940 ANKRD1Q15327 319 aa6.5□□□□□ -1.37
CDC42BPA-209ENST00000448940 PKN2Q16513 984 aaKnown RBP6.5□□□□□ -1.37
CDC42BPA-209ENST00000448940 GANCQ8TET4 914 aa6.5□□□□□ -1.37
CDC42BPA-209ENST00000448940 GLG1Q92896 1179 aa6.5□□□□□ -1.37
CDC42BPA-209ENST00000448940 SENP6Q9GZR1 1112 aaPredicted RBP6.5□□□□□ -1.37
CDC42BPA-209ENST00000448940 ADGRB2O60241 1585 aa6.5□□□□□ -1.37
CDC42BPA-209ENST00000448940 MROH2AA6NES4 1674 aa6.5□□□□□ -1.37
CDC42BPA-209ENST00000448940 ONECUT3O60422 494 aaPredicted RBP6.5□□□□□ -1.37
CDC42BPA-209ENST00000448940 RBM25P49756 843 aaKnown RBP6.5□□□□□ -1.37
CDC42BPA-209ENST00000448940 INHBEP58166 350 aa6.5□□□□□ -1.37
CDC42BPA-209ENST00000448940 RASA3Q14644 834 aa6.5□□□□□ -1.37
CDC42BPA-209ENST00000448940 TMEM67Q5HYA8 995 aa6.5□□□□□ -1.37
CDC42BPA-209ENST00000448940 IFIT1BQ5T764 474 aaKnown RBP6.5□□□□□ -1.37
CDC42BPA-209ENST00000448940 VPS33BQ9H267 617 aa6.5□□□□□ -1.37
CDC42BPA-209ENST00000448940 PI4KBQ9UBF8 816 aa6.5□□□□□ -1.37
CDC42BPA-209ENST00000448940 ADD3Q9UEY8 706 aaKnown RBP6.5□□□□□ -1.37
CDC42BPA-209ENST00000448940 TRIM27P14373 513 aa6.49□□□□□ -1.37
CDC42BPA-209ENST00000448940 ZSCAN20P17040 1043 aaPredicted RBP6.49□□□□□ -1.37
CDC42BPA-209ENST00000448940 PROSER3Q2NL68 480 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms