RNA–Protein interactions for RNA: ENST00000448497.1

RFC4-209, Transcript of replication factor C subunit 4, humanhuman

TSL 5

Gene RFC4, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-209ENST00000448497 KIAA1468Q9P260 1216 aa8.21□□□□□ -1.1
RFC4-209ENST00000448497 ZNF532Q9HCE3 1301 aa8.21□□□□□ -1.1
RFC4-209ENST00000448497 TCHHQ07283 1943 aa8.21□□□□□ -1.1
RFC4-209ENST00000448497 SNAP23O00161 211 aa8.2□□□□□ -1.1
RFC4-209ENST00000448497 IDH1O75874 414 aaKnown RBP8.2□□□□□ -1.1
RFC4-209ENST00000448497 APBA3O96018 575 aa8.2□□□□□ -1.1
RFC4-209ENST00000448497 FGAP02671 866 aa8.2□□□□□ -1.1
RFC4-209ENST00000448497 DDR1Q08345 913 aa8.2□□□□□ -1.1
RFC4-209ENST00000448497 TOB2Q14106 344 aaPredicted RBP8.2□□□□□ -1.1
RFC4-209ENST00000448497 IMMTQ16891 758 aaKnown RBP8.2□□□□□ -1.1
RFC4-209ENST00000448497 METTL3Q86U44 580 aaKnown RBP8.2□□□□□ -1.1
RFC4-209ENST00000448497 LAPTM4BQ86VI4 370 aa8.2□□□□□ -1.1
RFC4-209ENST00000448497 STRBPQ96SI9 672 aaKnown RBP8.2□□□□□ -1.1
RFC4-209ENST00000448497 KRTAP3-3Q9BYR6 98 aa8.2□□□□□ -1.1
RFC4-209ENST00000448497 KRTAP3-2Q9BYR7 98 aa8.2□□□□□ -1.1
RFC4-209ENST00000448497 RGS17Q9UGC6 210 aaPredicted RBP8.2□□□□□ -1.1
RFC4-209ENST00000448497 ZDHHC9Q9Y397 364 aa8.2□□□□□ -1.1
RFC4-209ENST00000448497 TAF6LQ9Y6J9 622 aa8.2□□□□□ -1.1
RFC4-209ENST00000448497 XDHP47989 1333 aa8.2□□□□□ -1.1
RFC4-209ENST00000448497 SALL1Q9NSC2 1324 aa8.2□□□□□ -1.1
RFC4-209ENST00000448497 COL1A1P02452 1464 aaPredicted RBP8.19□□□□□ -1.1
RFC4-209ENST00000448497 BHMG1C9JSJ3 638 aaPredicted RBP8.19□□□□□ -1.1
RFC4-209ENST00000448497 E7EWF7 191 aa8.19□□□□□ -1.1
RFC4-209ENST00000448497 ME3Q16798 604 aa8.19□□□□□ -1.1
RFC4-209ENST00000448497 ZNF827Q17R98 1081 aa8.19□□□□□ -1.1
RFC4-209ENST00000448497 SKOR2Q2VWA4 1001 aaPredicted RBP8.19□□□□□ -1.1
RFC4-209ENST00000448497 SLFNL1Q499Z3 407 aa8.19□□□□□ -1.1
RFC4-209ENST00000448497 STOX1Q6ZVD7 989 aa8.19□□□□□ -1.1
RFC4-209ENST00000448497 FBXO41Q8TF61 875 aa8.19□□□□□ -1.1
RFC4-209ENST00000448497 RBM17Q96I25 401 aaKnown RBP8.19□□□□□ -1.1
RFC4-209ENST00000448497 BRIP1Q9BX63 1249 aa8.19□□□□□ -1.1
RFC4-209ENST00000448497 PODXL2Q9NZ53 605 aa8.19□□□□□ -1.1
RFC4-209ENST00000448497 FAM198AQ9UFP1 575 aa8.19□□□□□ -1.1
RFC4-209ENST00000448497 PNMA3Q9UL41 463 aa8.19□□□□□ -1.1
RFC4-209ENST00000448497 WWC3Q9ULE0 1092 aa8.19□□□□□ -1.1
RFC4-209ENST00000448497 TPCN1Q9ULQ1 816 aa8.19□□□□□ -1.1
RFC4-209ENST00000448497 WDR33Q9C0J8 1336 aaKnown RBP8.19□□□□□ -1.1
RFC4-209ENST00000448497 LAMB1P07942 1786 aa8.19□□□□□ -1.1
RFC4-209ENST00000448497 COL11A2P13942 1736 aaPredicted RBP8.18□□□□□ -1.1
RFC4-209ENST00000448497 PATL2C9JE40 543 aaKnown RBP8.18□□□□□ -1.1
RFC4-209ENST00000448497 GOLGA6L22H0YM25 854 aa8.18□□□□□ -1.1
RFC4-209ENST00000448497 ZNF213O14771 459 aa8.18□□□□□ -1.1
RFC4-209ENST00000448497 NPHP1O15259 732 aa8.18□□□□□ -1.1
RFC4-209ENST00000448497 BAG4O95429 457 aaKnown RBP8.18□□□□□ -1.1
RFC4-209ENST00000448497 CPA1P15085 419 aa8.18□□□□□ -1.1
RFC4-209ENST00000448497 ATP2B4P23634 1241 aa8.18□□□□□ -1.1
RFC4-209ENST00000448497 HIBADHP31937 336 aaKnown RBP8.18□□□□□ -1.1
RFC4-209ENST00000448497 GYG1P46976 350 aa8.18□□□□□ -1.1
RFC4-209ENST00000448497 GIMAP6Q6P9H5 292 aa8.18□□□□□ -1.1
RFC4-209ENST00000448497 NUDT18Q6ZVK8 323 aa8.18□□□□□ -1.1
RFC4-209ENST00000448497 COL23A1Q86Y22 540 aaPredicted RBP8.18□□□□□ -1.1
RFC4-209ENST00000448497 MAGEB6Q8N7X4 407 aa8.18□□□□□ -1.1
RFC4-209ENST00000448497 RGS22Q8NE09 1264 aa8.18□□□□□ -1.1
RFC4-209ENST00000448497 PXYLP1Q8TE99 480 aa8.18□□□□□ -1.1
RFC4-209ENST00000448497 RPGRQ92834 1020 aaKnown RBP8.18□□□□□ -1.1
RFC4-209ENST00000448497 AIDAQ96BJ3 306 aa8.18□□□□□ -1.1
RFC4-209ENST00000448497 ZNF274Q96GC6 653 aaPredicted RBP8.18□□□□□ -1.1
RFC4-209ENST00000448497 LLPHQ9BRT6 129 aaKnown RBP8.18□□□□□ -1.1
RFC4-209ENST00000448497 MTA3Q9BTC8 594 aa8.18□□□□□ -1.1
RFC4-209ENST00000448497 TFCP2L1Q9NZI6 479 aa8.18□□□□□ -1.1
RFC4-209ENST00000448497 LRP2BPQ9P2M1 347 aa8.18□□□□□ -1.1
RFC4-209ENST00000448497 DLEC1Q9Y238 1755 aa8.17□□□□□ -1.1
RFC4-209ENST00000448497 CDK5RAP2Q96SN8 1893 aa8.17□□□□□ -1.1
RFC4-209ENST00000448497 MYH2Q9UKX2 1941 aa8.17□□□□□ -1.1
RFC4-209ENST00000448497 MYH15Q9Y2K3 1946 aa8.17□□□□□ -1.1
RFC4-209ENST00000448497 HRO43593 1189 aa8.17□□□□□ -1.1
RFC4-209ENST00000448497 PFKFB2O60825 505 aa8.17□□□□□ -1.1
RFC4-209ENST00000448497 LARGE1O95461 756 aa8.17□□□□□ -1.1
RFC4-209ENST00000448497 PDCP20941 246 aa8.17□□□□□ -1.1
RFC4-209ENST00000448497 NT5C2P49902 561 aa8.17□□□□□ -1.1
RFC4-209ENST00000448497 ST3GAL1Q11201 340 aa8.17□□□□□ -1.1
RFC4-209ENST00000448497 AMHR2Q16671 573 aa8.17□□□□□ -1.1
RFC4-209ENST00000448497 SPTY2D1Q68D10 685 aaPredicted RBP8.17□□□□□ -1.1
RFC4-209ENST00000448497 Q6ZUG5 572 aa8.17□□□□□ -1.1
RFC4-209ENST00000448497 VPS37DQ86XT2 251 aa8.17□□□□□ -1.1
RFC4-209ENST00000448497 SP8Q8IXZ3 490 aa8.17□□□□□ -1.1
RFC4-209ENST00000448497 MB21D2Q8IYB1 491 aaPredicted RBP8.17□□□□□ -1.1
RFC4-209ENST00000448497 TDRD7Q8NHU6 1098 aaKnown RBP8.17□□□□□ -1.1
RFC4-209ENST00000448497 NCOA7Q8NI08 942 aa8.17□□□□□ -1.1
RFC4-209ENST00000448497 WDR66Q8TBY9 1149 aa8.17□□□□□ -1.1
RFC4-209ENST00000448497 GTF3C6Q969F1 213 aa8.17□□□□□ -1.1
RFC4-209ENST00000448497 ANAPC4Q9UJX5 808 aa8.17□□□□□ -1.1
RFC4-209ENST00000448497 SMC3Q9UQE7 1217 aa8.17□□□□□ -1.1
RFC4-209ENST00000448497 FOCADQ5VW36 1801 aa8.17□□□□□ -1.1
RFC4-209ENST00000448497 BAZ2AQ9UIF9 1905 aaKnown RBP8.17□□□□□ -1.1
RFC4-209ENST00000448497 GSG1L2A8MUP6 293 aa8.16□□□□□ -1.1
RFC4-209ENST00000448497 TRIM66O15016 1216 aa8.16□□□□□ -1.1
RFC4-209ENST00000448497 MBD4O95243 580 aa8.16□□□□□ -1.1
RFC4-209ENST00000448497 PCP11498 1178 aaKnown RBP8.16□□□□□ -1.1
RFC4-209ENST00000448497 MCM5P33992 734 aa8.16□□□□□ -1.1
RFC4-209ENST00000448497 PDE6BP35913 854 aa8.16□□□□□ -1.1
RFC4-209ENST00000448497 PKP1Q13835 747 aa8.16□□□□□ -1.1
RFC4-209ENST00000448497 COL9A3Q14050 684 aaPredicted RBP8.16□□□□□ -1.1
RFC4-209ENST00000448497 TTLL5Q6EMB2 1281 aa8.16□□□□□ -1.1
RFC4-209ENST00000448497 POTEAQ6S8J7 498 aa8.16□□□□□ -1.1
RFC4-209ENST00000448497 ZNF804AQ7Z570 1209 aa8.16□□□□□ -1.1
RFC4-209ENST00000448497 CERS3Q8IU89 383 aa8.16□□□□□ -1.1
RFC4-209ENST00000448497 CCDC83Q8IWF9 413 aa8.16□□□□□ -1.1
RFC4-209ENST00000448497 IFNL3Q8IZI9 196 aa8.16□□□□□ -1.1
RFC4-209ENST00000448497 NSUN4Q96CB9 384 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms