RNA–Protein interactions for RNA: ENST00000448141.6

CCHCR1-206, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-206ENST00000448141 ZSCAN29Q8IWY8 852 aaPredicted RBP24.92■■□□□ 1.58
CCHCR1-206ENST00000448141 MAP2K2P36507 400 aa24.91■■□□□ 1.58
CCHCR1-206ENST00000448141 NOGQ13253 232 aa24.91■■□□□ 1.58
CCHCR1-206ENST00000448141 CLMNQ96JQ2 1002 aa24.91■■□□□ 1.58
CCHCR1-206ENST00000448141 LNPKQ9C0E8 428 aa24.91■■□□□ 1.58
CCHCR1-206ENST00000448141 PCNTO95613 3336 aa24.91■■□□□ 1.58
CCHCR1-206ENST00000448141 SALL3Q9BXA9 1300 aa24.9■■□□□ 1.58
CCHCR1-206ENST00000448141 ZNF532Q9HCE3 1301 aa24.9■■□□□ 1.58
CCHCR1-206ENST00000448141 DCAF15Q66K64 600 aa24.9■■□□□ 1.58
CCHCR1-206ENST00000448141 MIGA2Q7L4E1 593 aa24.9■■□□□ 1.58
CCHCR1-206ENST00000448141 SH3BP5LQ7L8J4 393 aa24.9■■□□□ 1.58
CCHCR1-206ENST00000448141 ZIC5Q96T25 663 aa24.9■■□□□ 1.58
CCHCR1-206ENST00000448141 ERC2O15083 957 aa24.89■■□□□ 1.58
CCHCR1-206ENST00000448141 NPM3O75607 178 aaKnown RBP24.89■■□□□ 1.58
CCHCR1-206ENST00000448141 ANKRD13AQ8IZ07 590 aa24.89■■□□□ 1.58
CCHCR1-206ENST00000448141 PI4K2BQ8TCG2 481 aa24.89■■□□□ 1.58
CCHCR1-206ENST00000448141 SLC10A4Q96EP9 437 aa24.89■■□□□ 1.58
CCHCR1-206ENST00000448141 CSRNP1Q96S65 589 aa24.89■■□□□ 1.58
CCHCR1-206ENST00000448141 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.89■■□□□ 1.582e-6■■■□□ 15.9
CCHCR1-206ENST00000448141 TCRBV5S4A2TA0A5A2 114 aa24.88■■□□□ 1.57
CCHCR1-206ENST00000448141 DDTLA6NHG4 134 aaPredicted RBP24.88■■□□□ 1.57
CCHCR1-206ENST00000448141 UNCXA6NJT0 531 aa24.88■■□□□ 1.57
CCHCR1-206ENST00000448141 GLRX3O76003 335 aaKnown RBP24.88■■□□□ 1.57
CCHCR1-206ENST00000448141 TGFBRAP1Q8WUH2 860 aa24.88■■□□□ 1.57
CCHCR1-206ENST00000448141 OSBPL5Q9H0X9 879 aaPredicted RBP24.88■■□□□ 1.57
CCHCR1-206ENST00000448141 MAGEB6P1A0A0J9YX57 407 aa24.87■■□□□ 1.57
CCHCR1-206ENST00000448141 ADD2P35612 726 aa24.87■■□□□ 1.57
CCHCR1-206ENST00000448141 NUCB1Q02818 461 aa24.87■■□□□ 1.57
CCHCR1-206ENST00000448141 SLFNL1Q499Z3 407 aa24.87■■□□□ 1.57
CCHCR1-206ENST00000448141 CHD1LQ86WJ1 897 aa24.87■■□□□ 1.57
CCHCR1-206ENST00000448141 CERS3Q8IU89 383 aa24.87■■□□□ 1.57
CCHCR1-206ENST00000448141 MAPKAPK5Q8IW41 473 aa24.87■■□□□ 1.57
CCHCR1-206ENST00000448141 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.87■■□□□ 1.57
CCHCR1-206ENST00000448141 ZNF341Q9BYN7 854 aa24.87■■□□□ 1.57
CCHCR1-206ENST00000448141 COL2A1P02458 1487 aaPredicted RBP24.87■■□□□ 1.57
CCHCR1-206ENST00000448141 ATRNL1Q5VV63 1379 aa24.86■■□□□ 1.57
CCHCR1-206ENST00000448141 HSPA1AP0DMV8 641 aaKnown RBP24.86■■□□□ 1.57
CCHCR1-206ENST00000448141 HSPA1BP0DMV9 641 aaKnown RBP24.86■■□□□ 1.57
CCHCR1-206ENST00000448141 MAP3K9P80192 1104 aa24.86■■□□□ 1.57
CCHCR1-206ENST00000448141 KIF23Q02241 960 aaPredicted RBP24.86■■□□□ 1.57
CCHCR1-206ENST00000448141 MAP2K1Q02750 393 aaPredicted RBP24.86■■□□□ 1.57
CCHCR1-206ENST00000448141 MKRN3Q13064 507 aaKnown RBP24.86■■□□□ 1.57
CCHCR1-206ENST00000448141 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.86■■□□□ 1.57
CCHCR1-206ENST00000448141 WRNIP1Q96S55 665 aa24.86■■□□□ 1.57
CCHCR1-206ENST00000448141 RIOK1Q9BRS2 568 aaKnown RBP24.86■■□□□ 1.57
CCHCR1-206ENST00000448141 STAP2Q9UGK3 403 aa24.86■■□□□ 1.57
CCHCR1-206ENST00000448141 FLT1P17948 1338 aa24.86■■□□□ 1.57
CCHCR1-206ENST00000448141 MYH1P12882 1939 aa24.85■■□□□ 1.57
CCHCR1-206ENST00000448141 CHGBP05060 677 aa24.85■■□□□ 1.57
CCHCR1-206ENST00000448141 CENPBP07199 599 aaPredicted RBP24.85■■□□□ 1.57
CCHCR1-206ENST00000448141 KBTBD3Q8NAB2 608 aa24.85■■□□□ 1.57
CCHCR1-206ENST00000448141 ELP3Q9H9T3 547 aa24.85■■□□□ 1.57
CCHCR1-206ENST00000448141 WBP1LQ9NX94 342 aa24.85■■□□□ 1.57
CCHCR1-206ENST00000448141 PDE1AP54750 535 aa24.84■■□□□ 1.57
CCHCR1-206ENST00000448141 VGLL4Q14135 290 aa24.84■■□□□ 1.57
CCHCR1-206ENST00000448141 ZSCAN25Q6NSZ9 544 aa24.84■■□□□ 1.57
CCHCR1-206ENST00000448141 ZKSCAN4Q969J2 545 aaPredicted RBP24.84■■□□□ 1.57
CCHCR1-206ENST00000448141 CSADQ9Y600 493 aa24.84■■□□□ 1.57
CCHCR1-206ENST00000448141 SPRYD7Q5W111 196 aa24.83■■□□□ 1.57
CCHCR1-206ENST00000448141 WNK4Q96J92 1243 aa24.83■■□□□ 1.57
CCHCR1-206ENST00000448141 SIPA1L1O43166 1804 aa24.83■■□□□ 1.57
CCHCR1-206ENST00000448141 SLURP2P0DP57 97 aa24.82■■□□□ 1.56
CCHCR1-206ENST00000448141 INPP5BP32019 993 aa24.82■■□□□ 1.56
CCHCR1-206ENST00000448141 USP5P45974 858 aa24.82■■□□□ 1.56
CCHCR1-206ENST00000448141 UBE3CQ15386 1083 aa24.82■■□□□ 1.56
CCHCR1-206ENST00000448141 NAV1Q8NEY1 1877 aa24.82■■□□□ 1.56
CCHCR1-206ENST00000448141 SAP30BPQ9UHR5 308 aaKnown RBP24.82■■□□□ 1.56
CCHCR1-206ENST00000448141 LAMB1P07942 1786 aa24.81■■□□□ 1.56
CCHCR1-206ENST00000448141 LCORLQ8N3X6 602 aa24.81■■□□□ 1.56
CCHCR1-206ENST00000448141 AIDAQ96BJ3 306 aa24.81■■□□□ 1.56
CCHCR1-206ENST00000448141 ARMT1Q9H993 441 aa24.81■■□□□ 1.56
CCHCR1-206ENST00000448141 ZNF112Q9UJU3 913 aa24.81■■□□□ 1.56
CCHCR1-206ENST00000448141 FAM196BA6NMK8 535 aa24.8■■□□□ 1.56
CCHCR1-206ENST00000448141 MBD4O95243 580 aa24.8■■□□□ 1.56
CCHCR1-206ENST00000448141 CNKSR2Q8WXI2 1034 aa24.8■■□□□ 1.56
CCHCR1-206ENST00000448141 OPTNQ96CV9 577 aa24.8■■□□□ 1.56
CCHCR1-206ENST00000448141 BEGAINQ9BUH8 593 aa24.8■■□□□ 1.56
CCHCR1-206ENST00000448141 CRNKL1Q9BZJ0 848 aaKnown RBP24.8■■□□□ 1.56
CCHCR1-206ENST00000448141 DHX36Q9H2U1 1008 aaKnown RBP24.8■■□□□ 1.56
CCHCR1-206ENST00000448141 PALD1Q9ULE6 856 aa24.8■■□□□ 1.56
CCHCR1-206ENST00000448141 SNCAIPQ9Y6H5 919 aa24.8■■□□□ 1.56
CCHCR1-206ENST00000448141 DDX60LQ5H9U9 1706 aaKnown RBP24.8■■□□□ 1.56
CCHCR1-206ENST00000448141 ZBTB48P10074 688 aaPredicted RBP24.79■■□□□ 1.56
CCHCR1-206ENST00000448141 GJA5P36382 358 aa24.79■■□□□ 1.56
CCHCR1-206ENST00000448141 MAP3K10Q02779 954 aa24.79■■□□□ 1.56
CCHCR1-206ENST00000448141 PHF20L1A8MW92 1017 aa24.78■■□□□ 1.56
CCHCR1-206ENST00000448141 FOXN1O15353 648 aa24.78■■□□□ 1.56
CCHCR1-206ENST00000448141 RNF113AO15541 343 aaKnown RBP24.78■■□□□ 1.56
CCHCR1-206ENST00000448141 SLC4A8Q2Y0W8 1093 aa24.78■■□□□ 1.56
CCHCR1-206ENST00000448141 PLEKHM2Q8IWE5 1019 aa24.78■■□□□ 1.56
CCHCR1-206ENST00000448141 FSD1Q9BTV5 496 aa24.78■■□□□ 1.56
CCHCR1-206ENST00000448141 PUS7LQ9H0K6 701 aaKnown RBP24.78■■□□□ 1.56
CCHCR1-206ENST00000448141 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.78■■□□□ 1.56
CCHCR1-206ENST00000448141 PI4KBQ9UBF8 816 aa24.78■■□□□ 1.56
CCHCR1-206ENST00000448141 DOCK1Q14185 1865 aa24.77■■□□□ 1.56
CCHCR1-206ENST00000448141 TBC1D12O60347 775 aa24.77■■□□□ 1.56
CCHCR1-206ENST00000448141 REM2Q8IYK8 340 aaPredicted RBP24.77■■□□□ 1.56
CCHCR1-206ENST00000448141 OTUD5Q96G74 571 aa24.77■■□□□ 1.56
CCHCR1-206ENST00000448141 SPDYE5A6NIY4 337 aa24.76■■□□□ 1.55
CCHCR1-206ENST00000448141 ZFYP08048 801 aaPredicted RBP24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms