RNA–Protein interactions for RNA: ENST00000448087.5

GTF3C3-205, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 1,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-205ENST00000448087 ASPAP45381 313 aa7.43□□□□□ -1.22
GTF3C3-205ENST00000448087 USP11P51784 963 aa7.43□□□□□ -1.22
GTF3C3-205ENST00000448087 LMNB2Q03252 620 aa7.43□□□□□ -1.22
GTF3C3-205ENST00000448087 CDPF1Q6NVV7 123 aa7.43□□□□□ -1.22
GTF3C3-205ENST00000448087 PRR23CQ6ZRP0 262 aa7.43□□□□□ -1.22
GTF3C3-205ENST00000448087 RNF34Q969K3 372 aa7.43□□□□□ -1.22
GTF3C3-205ENST00000448087 FANCD2OSQ96PS1 177 aa7.43□□□□□ -1.22
GTF3C3-205ENST00000448087 DISC1Q9NRI5 854 aa7.43□□□□□ -1.22
GTF3C3-205ENST00000448087 DCDC2CA8MYV0 355 aa7.42□□□□□ -1.22
GTF3C3-205ENST00000448087 FURINP09958 794 aa7.42□□□□□ -1.22
GTF3C3-205ENST00000448087 FAM160A1Q05DH4 1040 aa7.42□□□□□ -1.22
GTF3C3-205ENST00000448087 INPP5AQ14642 412 aa7.42□□□□□ -1.22
GTF3C3-205ENST00000448087 KCNF1Q9H3M0 494 aa7.42□□□□□ -1.22
GTF3C3-205ENST00000448087 CSADQ9Y600 493 aa7.42□□□□□ -1.22
GTF3C3-205ENST00000448087 RAB6AP20340 208 aa7.41□□□□□ -1.22
GTF3C3-205ENST00000448087 MAP4P27816 1152 aaKnown RBP7.41□□□□□ -1.22
GTF3C3-205ENST00000448087 CDK8P49336 464 aa7.41□□□□□ -1.22
GTF3C3-205ENST00000448087 ERVK-24P63145 666 aa7.41□□□□□ -1.22
GTF3C3-205ENST00000448087 LRFN4Q6PJG9 635 aa7.41□□□□□ -1.22
GTF3C3-205ENST00000448087 FBLIM1Q8WUP2 373 aa7.41□□□□□ -1.22
GTF3C3-205ENST00000448087 JARID2Q92833 1246 aaPredicted RBP7.41□□□□□ -1.22
GTF3C3-205ENST00000448087 ATXN3LQ9H3M9 355 aa7.41□□□□□ -1.22
GTF3C3-205ENST00000448087 RAXQ9Y2V3 346 aa7.41□□□□□ -1.22
GTF3C3-205ENST00000448087 H2AFB1P0C5Y9 115 aa7.41□□□□□ -1.22
GTF3C3-205ENST00000448087 H2AFB2P0C5Z0 115 aa7.41□□□□□ -1.22
GTF3C3-205ENST00000448087 RXRBP28702 533 aa7.41□□□□□ -1.22
GTF3C3-205ENST00000448087 HDLBPQ00341 1268 aaKnown RBP7.41□□□□□ -1.22
GTF3C3-205ENST00000448087 BNC2Q6ZN30 1099 aaPredicted RBP7.41□□□□□ -1.22
GTF3C3-205ENST00000448087 BEND4Q6ZU67 534 aa7.41□□□□□ -1.22
GTF3C3-205ENST00000448087 METTL16Q86W50 562 aaKnown RBP7.41□□□□□ -1.22
GTF3C3-205ENST00000448087 C12orf40Q86WS4 652 aa7.41□□□□□ -1.22
GTF3C3-205ENST00000448087 ELMO3Q96BJ8 720 aa7.41□□□□□ -1.22
GTF3C3-205ENST00000448087 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.4□□□□□ -1.23
GTF3C3-205ENST00000448087 TTLL4Q14679 1199 aa7.4□□□□□ -1.23
GTF3C3-205ENST00000448087 ZNF394Q53GI3 561 aa7.4□□□□□ -1.23
GTF3C3-205ENST00000448087 WIPI1Q5MNZ9 446 aaPredicted RBP7.4□□□□□ -1.23
GTF3C3-205ENST00000448087 C9orf131Q5VYM1 1079 aa7.4□□□□□ -1.23
GTF3C3-205ENST00000448087 CCDC84Q86UT8 332 aaPredicted RBP7.4□□□□□ -1.23
GTF3C3-205ENST00000448087 PLPPR2Q96GM1 343 aa7.4□□□□□ -1.23
GTF3C3-205ENST00000448087 ACSS3Q9H6R3 686 aa7.4□□□□□ -1.23
GTF3C3-205ENST00000448087 STOML1Q9UBI4 398 aa7.4□□□□□ -1.23
GTF3C3-205ENST00000448087 HMX2A2RU54 273 aa7.39□□□□□ -1.23
GTF3C3-205ENST00000448087 DYRK3O43781 588 aa7.39□□□□□ -1.23
GTF3C3-205ENST00000448087 F13A1P00488 732 aa7.39□□□□□ -1.23
GTF3C3-205ENST00000448087 HCLS1P14317 486 aaPredicted RBP7.39□□□□□ -1.23
GTF3C3-205ENST00000448087 GARTP22102 1010 aa7.39□□□□□ -1.23
GTF3C3-205ENST00000448087 EIF4A3P38919 411 aaKnown RBP7.39□□□□□ -1.23
GTF3C3-205ENST00000448087 PPM1JQ5JR12 505 aa7.39□□□□□ -1.23
GTF3C3-205ENST00000448087 SNAP47Q5SQN1 464 aa7.39□□□□□ -1.23
GTF3C3-205ENST00000448087 FBXL19Q6PCT2 694 aa7.39□□□□□ -1.23
GTF3C3-205ENST00000448087 HDXQ7Z353 690 aa7.39□□□□□ -1.23
GTF3C3-205ENST00000448087 USP48Q86UV5 1035 aa7.39□□□□□ -1.23
GTF3C3-205ENST00000448087 CLEC10AQ8IUN9 316 aa7.39□□□□□ -1.23
GTF3C3-205ENST00000448087 GOLM1Q8NBJ4 401 aa7.39□□□□□ -1.23
GTF3C3-205ENST00000448087 EZH1Q92800 747 aaPredicted RBP7.39□□□□□ -1.23
GTF3C3-205ENST00000448087 FAM83CQ9BQN1 747 aa7.39□□□□□ -1.23
GTF3C3-205ENST00000448087 YIPF2Q9BWQ6 316 aa7.39□□□□□ -1.23
GTF3C3-205ENST00000448087 SEMA6CQ9H3T2 930 aa7.39□□□□□ -1.23
GTF3C3-205ENST00000448087 PIDD1Q9HB75 910 aa7.39□□□□□ -1.23
GTF3C3-205ENST00000448087 PCDHGB7Q9Y5F8 929 aa7.39□□□□□ -1.23
GTF3C3-205ENST00000448087 FAM95CA0A1B0GW59 222 aa7.38□□□□□ -1.23
GTF3C3-205ENST00000448087 E9PSI1 815 aa7.38□□□□□ -1.23
GTF3C3-205ENST00000448087 NEFMP07197 916 aa7.38□□□□□ -1.23
GTF3C3-205ENST00000448087 NFICP08651 508 aa7.38□□□□□ -1.23
GTF3C3-205ENST00000448087 RING1Q06587 406 aa7.38□□□□□ -1.23
GTF3C3-205ENST00000448087 C7orf69Q9H7B7 122 aa7.38□□□□□ -1.23
GTF3C3-205ENST00000448087 PICK1Q9NRD5 415 aa7.38□□□□□ -1.23
GTF3C3-205ENST00000448087 ADAMTS1Q9UHI8 967 aa7.38□□□□□ -1.23
GTF3C3-205ENST00000448087 SNCAIPQ9Y6H5 919 aa7.38□□□□□ -1.23
GTF3C3-205ENST00000448087 PRAMEF27A3QJZ7 478 aa7.38□□□□□ -1.23
GTF3C3-205ENST00000448087 FAM221AA4D161 298 aa7.38□□□□□ -1.23
GTF3C3-205ENST00000448087 RNGTTO60942 597 aaKnown RBP7.38□□□□□ -1.23
GTF3C3-205ENST00000448087 RPL6Q02878 288 aaKnown RBP7.38□□□□□ -1.23
GTF3C3-205ENST00000448087 CYFIP1Q7L576 1253 aa7.38□□□□□ -1.23
GTF3C3-205ENST00000448087 RNF214Q8ND24 703 aa7.38□□□□□ -1.23
GTF3C3-205ENST00000448087 GATAD2BQ8WXI9 593 aa7.38□□□□□ -1.23
GTF3C3-205ENST00000448087 KCNQ5Q9NR82 932 aa7.38□□□□□ -1.23
GTF3C3-205ENST00000448087 DAGLAQ9Y4D2 1042 aa7.38□□□□□ -1.23
GTF3C3-205ENST00000448087 GFRA2O00451 464 aa7.37□□□□□ -1.23
GTF3C3-205ENST00000448087 CILPO75339 1184 aa7.37□□□□□ -1.23
GTF3C3-205ENST00000448087 NTF4P34130 210 aa7.37□□□□□ -1.23
GTF3C3-205ENST00000448087 RACK1P63244 317 aaKnown RBP7.37□□□□□ -1.23
GTF3C3-205ENST00000448087 NFKBIBQ15653 356 aa7.37□□□□□ -1.23
GTF3C3-205ENST00000448087 ZBTB37Q5TC79 503 aa7.37□□□□□ -1.23
GTF3C3-205ENST00000448087 NT5DC4Q86YG4 428 aa7.37□□□□□ -1.23
GTF3C3-205ENST00000448087 SMYD4Q8IYR2 804 aaPredicted RBP7.37□□□□□ -1.23
GTF3C3-205ENST00000448087 ZNF296Q8WUU4 475 aaPredicted RBP7.37□□□□□ -1.23
GTF3C3-205ENST00000448087 SEMA6BQ9H3T3 888 aa7.37□□□□□ -1.23
GTF3C3-205ENST00000448087 LGR6Q9HBX8 967 aa7.37□□□□□ -1.23
GTF3C3-205ENST00000448087 DDX41Q9UJV9 622 aaKnown RBP7.37□□□□□ -1.23
GTF3C3-205ENST00000448087 BPNT1O95861 308 aa7.36□□□□□ -1.23
GTF3C3-205ENST00000448087 DIEXFQ68CQ4 756 aaKnown RBP7.36□□□□□ -1.23
GTF3C3-205ENST00000448087 FAM196AQ6ZSG2 479 aa7.36□□□□□ -1.23
GTF3C3-205ENST00000448087 FBXO27Q8NI29 283 aa7.36□□□□□ -1.23
GTF3C3-205ENST00000448087 ISL2Q96A47 359 aa7.36□□□□□ -1.23
GTF3C3-205ENST00000448087 SUPT16HQ9Y5B9 1047 aaKnown RBP7.36□□□□□ -1.23
GTF3C3-205ENST00000448087 FANCGO15287 622 aa7.35□□□□□ -1.23
GTF3C3-205ENST00000448087 DYNC1LI2O43237 492 aaPredicted RBP7.35□□□□□ -1.23
GTF3C3-205ENST00000448087 GREM1O60565 184 aa7.35□□□□□ -1.23
GTF3C3-205ENST00000448087 TCF3P15923 654 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms