RNA–Protein interactions for RNA: ENST00000447696.5

MRPL28-205, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 3

Gene MRPL28, Length 722 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-205ENST00000447696 RAB11FIP3O75154 756 aa29.35■■■□□ 2.29
MRPL28-205ENST00000447696 WDHD1O75717 1129 aaPredicted RBP29.35■■■□□ 2.29
MRPL28-205ENST00000447696 TBC1D8O95759 1140 aa29.35■■■□□ 2.29
MRPL28-205ENST00000447696 NPM3O75607 178 aaKnown RBP29.34■■■□□ 2.29
MRPL28-205ENST00000447696 CYP2E1P05181 493 aaPredicted RBP29.34■■■□□ 2.29
MRPL28-205ENST00000447696 RHBDL3P58872 404 aa29.34■■■□□ 2.29
MRPL28-205ENST00000447696 ZAP70P43403 619 aa29.33■■■□□ 2.29
MRPL28-205ENST00000447696 CLASRPQ8N2M8 674 aaKnown RBP29.33■■■□□ 2.29
MRPL28-205ENST00000447696 IL1RAPL2Q9NP60 686 aa29.33■■■□□ 2.29
MRPL28-205ENST00000447696 TESPA1A2RU30 521 aaPredicted RBP29.32■■■□□ 2.28
MRPL28-205ENST00000447696 SPDYE5A6NIY4 337 aa29.32■■■□□ 2.28
MRPL28-205ENST00000447696 IFNL1Q8IU54 200 aa29.32■■■□□ 2.28
MRPL28-205ENST00000447696 ZFPM1Q8IX07 1006 aa29.32■■■□□ 2.28
MRPL28-205ENST00000447696 ZNF112Q9UJU3 913 aa29.32■■■□□ 2.28
MRPL28-205ENST00000447696 SNCAIPQ9Y6H5 919 aa29.32■■■□□ 2.28
MRPL28-205ENST00000447696 ATRNL1Q5VV63 1379 aa29.31■■■□□ 2.28
MRPL28-205ENST00000447696 NAA16Q6N069 864 aaPredicted RBP29.31■■■□□ 2.28
MRPL28-205ENST00000447696 MIGA2Q7L4E1 593 aa29.31■■■□□ 2.28
MRPL28-205ENST00000447696 FKTNO75072 461 aa29.3■■■□□ 2.28
MRPL28-205ENST00000447696 ERO1BQ86YB8 467 aa29.3■■■□□ 2.28
MRPL28-205ENST00000447696 NOL10Q9BSC4 688 aaKnown RBP29.3■■■□□ 2.28
MRPL28-205ENST00000447696 DDX4Q9NQI0 724 aaKnown RBP29.3■■■□□ 2.28
MRPL28-205ENST00000447696 OTUD7BQ6GQQ9 843 aa29.29■■■□□ 2.28
MRPL28-205ENST00000447696 ZKSCAN4Q969J2 545 aaPredicted RBP29.29■■■□□ 2.28
MRPL28-205ENST00000447696 PIH1D3Q9NQM4 214 aaKnown RBP29.29■■■□□ 2.28
MRPL28-205ENST00000447696 DOCK2Q92608 1830 aa29.29■■■□□ 2.28
MRPL28-205ENST00000447696 COL2A1P02458 1487 aaPredicted RBP29.29■■■□□ 2.28
MRPL28-205ENST00000447696 APBB1O00213 710 aa29.28■■■□□ 2.28
MRPL28-205ENST00000447696 IGF2BP3O00425 579 aaKnown RBP eCLIP29.28■■■□□ 2.28
MRPL28-205ENST00000447696 BAG3O95817 575 aa29.28■■■□□ 2.28
MRPL28-205ENST00000447696 PLCG2P16885 1265 aa29.28■■■□□ 2.28
MRPL28-205ENST00000447696 GTF2A2P52657 109 aa29.28■■■□□ 2.28
MRPL28-205ENST00000447696 PICALMQ13492 652 aa29.28■■■□□ 2.28
MRPL28-205ENST00000447696 TMED8Q6PL24 325 aaPredicted RBP29.28■■■□□ 2.28
MRPL28-205ENST00000447696 SH3BP5LQ7L8J4 393 aa29.28■■■□□ 2.28
MRPL28-205ENST00000447696 ZSCAN29Q8IWY8 852 aaPredicted RBP29.28■■■□□ 2.28
MRPL28-205ENST00000447696 CNKSR2Q8WXI2 1034 aa29.28■■■□□ 2.28
MRPL28-205ENST00000447696 OTUD5Q96G74 571 aa29.28■■■□□ 2.28
MRPL28-205ENST00000447696 MS4A4AQ96JQ5 239 aa29.28■■■□□ 2.28
MRPL28-205ENST00000447696 IFIT2P09913 472 aaKnown RBP29.27■■■□□ 2.28
MRPL28-205ENST00000447696 NOL9Q5SY16 702 aaKnown RBP29.27■■■□□ 2.28
MRPL28-205ENST00000447696 YTHDC1Q96MU7 727 aaKnown RBP29.27■■■□□ 2.28
MRPL28-205ENST00000447696 AK9Q5TCS8 1911 aa29.26■■■□□ 2.27
MRPL28-205ENST00000447696 INPP5BP32019 993 aa29.26■■■□□ 2.27
MRPL28-205ENST00000447696 RRP1P56182 461 aaKnown RBP29.26■■■□□ 2.27
MRPL28-205ENST00000447696 PPP4CP60510 307 aa29.26■■■□□ 2.27
MRPL28-205ENST00000447696 MAP3K10Q02779 954 aa29.26■■■□□ 2.27
MRPL28-205ENST00000447696 PPIL2Q13356 520 aa29.26■■■□□ 2.27
MRPL28-205ENST00000447696 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.26■■■□□ 2.27
MRPL28-205ENST00000447696 DDTLA6NHG4 134 aaPredicted RBP29.25■■■□□ 2.27
MRPL28-205ENST00000447696 PPATQ06203 517 aa29.25■■■□□ 2.27
MRPL28-205ENST00000447696 TEX11Q8IYF3 940 aa29.25■■■□□ 2.27
MRPL28-205ENST00000447696 PTPN18Q99952 460 aa29.24■■■□□ 2.27
MRPL28-205ENST00000447696 IDH1O75874 414 aaKnown RBP29.23■■■□□ 2.27
MRPL28-205ENST00000447696 ADGRA1Q86SQ6 560 aa29.23■■■□□ 2.27
MRPL28-205ENST00000447696 SH3RF3Q8TEJ3 882 aaPredicted RBP29.23■■■□□ 2.27
MRPL28-205ENST00000447696 BRI3BPQ8WY22 251 aa29.23■■■□□ 2.27
MRPL28-205ENST00000447696 OSBPL5Q9H0X9 879 aaPredicted RBP29.23■■■□□ 2.27
MRPL28-205ENST00000447696 AATFQ9NY61 560 aaKnown RBP eCLIP29.23■■■□□ 2.27
MRPL28-205ENST00000447696 CCL15-CCL14A0A0B4J2E2 113 aa29.22■■■□□ 2.27
MRPL28-205ENST00000447696 PHF20L1A8MW92 1017 aa29.22■■■□□ 2.27
MRPL28-205ENST00000447696 CETPP11597 493 aa29.22■■■□□ 2.27
MRPL28-205ENST00000447696 SNAPC2Q13487 334 aa29.22■■■□□ 2.27
MRPL28-205ENST00000447696 TTF1Q15361 905 aaPredicted RBP29.22■■■□□ 2.27
MRPL28-205ENST00000447696 CCL15Q16663 113 aa29.22■■■□□ 2.27
MRPL28-205ENST00000447696 CERS3Q8IU89 383 aa29.22■■■□□ 2.27
MRPL28-205ENST00000447696 LRRCC1Q9C099 1032 aa29.22■■■□□ 2.27
MRPL28-205ENST00000447696 IRF6O14896 467 aa29.21■■■□□ 2.27
MRPL28-205ENST00000447696 TBC1D12O60347 775 aa29.21■■■□□ 2.27
MRPL28-205ENST00000447696 MAP3K12Q12852 859 aa29.21■■■□□ 2.27
MRPL28-205ENST00000447696 R3HDMLQ9H3Y0 253 aa29.21■■■□□ 2.27
MRPL28-205ENST00000447696 CYP7A1P22680 504 aa29.2■■■□□ 2.26
MRPL28-205ENST00000447696 ANTXR1Q9H6X2 564 aa29.2■■■□□ 2.26
MRPL28-205ENST00000447696 NDUFB9Q9Y6M9 179 aa29.2■■■□□ 2.26
MRPL28-205ENST00000447696 MYO5AQ9Y4I1 1855 aaKnown RBP29.2■■■□□ 2.26
MRPL28-205ENST00000447696 SCYL3Q8IZE3 742 aa29.19■■■□□ 2.26
MRPL28-205ENST00000447696 ZCCHC17Q9NP64 241 aaKnown RBP29.19■■■□□ 2.26
MRPL28-205ENST00000447696 MAGEB6Q8N7X4 407 aa29.18■■■□□ 2.26
MRPL28-205ENST00000447696 DHX36Q9H2U1 1008 aaKnown RBP29.18■■■□□ 2.26
MRPL28-205ENST00000447696 DCTPP1Q9H773 170 aa29.18■■■□□ 2.26
MRPL28-205ENST00000447696 KCNH4Q9UQ05 1017 aa29.18■■■□□ 2.26
MRPL28-205ENST00000447696 CTNND1O60716 968 aaKnown RBP29.17■■■□□ 2.26
MRPL28-205ENST00000447696 CRHR2Q13324 411 aa29.17■■■□□ 2.26
MRPL28-205ENST00000447696 ATP5JP18859 108 aa29.16■■■□□ 2.26
MRPL28-205ENST00000447696 PICK1Q9NRD5 415 aa29.16■■■□□ 2.26
MRPL28-205ENST00000447696 FLT1P17948 1338 aa29.16■■■□□ 2.26
MRPL28-205ENST00000447696 TGFBRAP1Q8WUH2 860 aa29.15■■■□□ 2.26
MRPL28-205ENST00000447696 XPO5Q9HAV4 1204 aaKnown RBP eCLIP29.15■■■□□ 2.26
MRPL28-205ENST00000447696 HERC5Q9UII4 1024 aaKnown RBP29.15■■■□□ 2.26
MRPL28-205ENST00000447696 FAM43AQ8N2R8 423 aa29.14■■■□□ 2.26
MRPL28-205ENST00000447696 DNAJC2Q99543 621 aaKnown RBP29.14■■■□□ 2.26
MRPL28-205ENST00000447696 PI4KBQ9UBF8 816 aa29.14■■■□□ 2.26
MRPL28-205ENST00000447696 TRIM17Q9Y577 477 aa29.14■■■□□ 2.26
MRPL28-205ENST00000447696 FOCADQ5VW36 1801 aa29.14■■■□□ 2.26
MRPL28-205ENST00000447696 GOLIM4O00461 696 aa29.13■■■□□ 2.25
MRPL28-205ENST00000447696 CXCL11O14625 94 aa29.13■■■□□ 2.25
MRPL28-205ENST00000447696 PTPRAP18433 802 aa29.13■■■□□ 2.25
MRPL28-205ENST00000447696 DYNLL1P63167 89 aaKnown RBP29.13■■■□□ 2.25
MRPL28-205ENST00000447696 TAF1CQ15572 869 aaPredicted RBP29.13■■■□□ 2.25
MRPL28-205ENST00000447696 MAPKAPK5Q8IW41 473 aa29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms