RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 ZSWIM8A7E2V4 1837 aa30.31■■■□□ 2.44
PMS1-214ENST00000446877 A0A0G2JLL6 359 aaPredicted RBP30.3■■■□□ 2.44
PMS1-214ENST00000446877 PHF20L1A8MW92 1017 aa30.3■■■□□ 2.44
PMS1-214ENST00000446877 GADL1Q6ZQY3 521 aa30.3■■■□□ 2.44
PMS1-214ENST00000446877 PRRT2Q7Z6L0 340 aaPredicted RBP30.3■■■□□ 2.44
PMS1-214ENST00000446877 DZIP1Q86YF9 867 aaKnown RBP30.3■■■□□ 2.44
PMS1-214ENST00000446877 PTPRAP18433 802 aa30.29■■■□□ 2.44
PMS1-214ENST00000446877 TRIOBPQ9H2D6 2365 aa30.29■■■□□ 2.44
PMS1-214ENST00000446877 SLFN5Q08AF3 891 aa30.28■■■□□ 2.44
PMS1-214ENST00000446877 NR2E3Q9Y5X4 410 aa30.28■■■□□ 2.44
PMS1-214ENST00000446877 CCDC102BQ68D86 513 aa30.27■■■□□ 2.44
PMS1-214ENST00000446877 ABCF2Q9UG63 623 aa30.27■■■□□ 2.44
PMS1-214ENST00000446877 SLC45A1Q9Y2W3 748 aa30.27■■■□□ 2.44
PMS1-214ENST00000446877 AFG3L2Q9Y4W6 797 aa30.27■■■□□ 2.44
PMS1-214ENST00000446877 SPTY2D1Q68D10 685 aaPredicted RBP30.26■■■□□ 2.43
PMS1-214ENST00000446877 SMCR8Q8TEV9 937 aaPredicted RBP30.26■■■□□ 2.43
PMS1-214ENST00000446877 U2AF1L4Q8WU68 220 aaKnown RBP30.26■■■□□ 2.43
PMS1-214ENST00000446877 GABRQQ9UN88 632 aa30.26■■■□□ 2.43
PMS1-214ENST00000446877 GAKO14976 1311 aa30.25■■■□□ 2.43
PMS1-214ENST00000446877 ADCY3O60266 1144 aa30.25■■■□□ 2.43
PMS1-214ENST00000446877 CTNND1O60716 968 aaKnown RBP30.25■■■□□ 2.43
PMS1-214ENST00000446877 ADORA1P30542 326 aa30.25■■■□□ 2.43
PMS1-214ENST00000446877 UBE2Q1Q7Z7E8 422 aa30.25■■■□□ 2.43
PMS1-214ENST00000446877 PA2G4Q9UQ80 394 aaKnown RBP30.25■■■□□ 2.43
PMS1-214ENST00000446877 AK9Q5TCS8 1911 aa30.25■■■□□ 2.43
PMS1-214ENST00000446877 ATRNL1Q5VV63 1379 aa30.25■■■□□ 2.43
PMS1-214ENST00000446877 TNPO2O14787 897 aaKnown RBP30.24■■■□□ 2.43
PMS1-214ENST00000446877 ZBTB22O15209 634 aa30.24■■■□□ 2.43
PMS1-214ENST00000446877 FLT3LGP49771 235 aa30.24■■■□□ 2.43
PMS1-214ENST00000446877 MAP3K10Q02779 954 aa30.24■■■□□ 2.43
PMS1-214ENST00000446877 SH3BP5LQ7L8J4 393 aa30.24■■■□□ 2.43
PMS1-214ENST00000446877 UNC93B1Q9H1C4 597 aa30.24■■■□□ 2.43
PMS1-214ENST00000446877 RBM27Q9P2N5 1060 aaKnown RBP30.24■■■□□ 2.43
PMS1-214ENST00000446877 FARP2O94887 1054 aaPredicted RBP30.23■■■□□ 2.43
PMS1-214ENST00000446877 PICALMQ13492 652 aa30.23■■■□□ 2.43
PMS1-214ENST00000446877 FAM163AQ96GL9 167 aaPredicted RBP30.23■■■□□ 2.43
PMS1-214ENST00000446877 COPRSQ9NQ92 184 aa30.23■■■□□ 2.43
PMS1-214ENST00000446877 DDTLA6NHG4 134 aaPredicted RBP30.22■■■□□ 2.43
PMS1-214ENST00000446877 TRIM75PA6NK02 468 aa30.22■■■□□ 2.43
PMS1-214ENST00000446877 SGPL1O95470 568 aa30.22■■■□□ 2.43
PMS1-214ENST00000446877 TIMM10P62072 90 aa30.22■■■□□ 2.43
PMS1-214ENST00000446877 RASGRF1Q13972 1273 aa30.22■■■□□ 2.43
PMS1-214ENST00000446877 API5Q9BZZ5 524 aaKnown RBP30.22■■■□□ 2.43
PMS1-214ENST00000446877 NOB1Q9ULX3 412 aaKnown RBP30.22■■■□□ 2.43
PMS1-214ENST00000446877 BTDP43251 543 aa30.21■■■□□ 2.43
PMS1-214ENST00000446877 PXYLP1Q8TE99 480 aa30.21■■■□□ 2.43
PMS1-214ENST00000446877 RANBP2P49792 3224 aaKnown RBP30.2■■■□□ 2.43
PMS1-214ENST00000446877 TFRCP02786 760 aaKnown RBP30.2■■■□□ 2.43
PMS1-214ENST00000446877 CAPN2P17655 700 aa30.2■■■□□ 2.43
PMS1-214ENST00000446877 PDS5AQ29RF7 1337 aaKnown RBP30.2■■■□□ 2.42
PMS1-214ENST00000446877 INHAP05111 366 aa30.19■■■□□ 2.42
PMS1-214ENST00000446877 ELNP15502 786 aa30.19■■■□□ 2.42
PMS1-214ENST00000446877 IRF5Q13568 498 aa30.19■■■□□ 2.42
PMS1-214ENST00000446877 ERICH6Q7L0X2 663 aa30.19■■■□□ 2.42
PMS1-214ENST00000446877 COA7Q96BR5 231 aa30.19■■■□□ 2.42
PMS1-214ENST00000446877 DDX4Q9NQI0 724 aaKnown RBP30.19■■■□□ 2.42
PMS1-214ENST00000446877 TAOK2Q9UL54 1235 aa30.19■■■□□ 2.42
PMS1-214ENST00000446877 AKAP2Q9Y2D5 859 aa30.19■■■□□ 2.42
PMS1-214ENST00000446877 MYH13Q9UKX3 1938 aa30.18■■■□□ 2.42
PMS1-214ENST00000446877 MVPQ14764 893 aaKnown RBP30.18■■■□□ 2.42
PMS1-214ENST00000446877 CDCA7LQ96GN5 454 aa30.18■■■□□ 2.42
PMS1-214ENST00000446877 PNMA3Q9UL41 463 aa30.18■■■□□ 2.42
PMS1-214ENST00000446877 AGTPBP1Q9UPW5 1226 aa30.18■■■□□ 2.42
PMS1-214ENST00000446877 MROH7-TTC4A0A0A0MT08 1334 aa30.18■■■□□ 2.42
PMS1-214ENST00000446877 SZT2Q5T011 3432 aa30.17■■■□□ 2.42
PMS1-214ENST00000446877 SLURP2P0DP57 97 aa30.17■■■□□ 2.42
PMS1-214ENST00000446877 DEFB118Q96PH6 123 aa30.17■■■□□ 2.42
PMS1-214ENST00000446877 RFX7Q2KHR2 1363 aa30.16■■■□□ 2.42
PMS1-214ENST00000446877 A0A1B0GUL7 405 aa30.16■■■□□ 2.42
PMS1-214ENST00000446877 TBC1D12O60347 775 aa30.16■■■□□ 2.42
PMS1-214ENST00000446877 EVI5O60447 810 aa30.16■■■□□ 2.42
PMS1-214ENST00000446877 CT47B1P0C2W7 299 aaPredicted RBP30.16■■■□□ 2.42
PMS1-214ENST00000446877 MECOMQ03112 1051 aa30.16■■■□□ 2.42
PMS1-214ENST00000446877 ANKRD13CQ8N6S4 541 aa30.16■■■□□ 2.42
PMS1-214ENST00000446877 XAGE2Q96GT9 111 aa30.16■■■□□ 2.42
PMS1-214ENST00000446877 XPO5Q9HAV4 1204 aaKnown RBP eCLIP30.16■■■□□ 2.42
PMS1-214ENST00000446877 GPR75-ASB3A0A0A6YYF3 556 aa30.15■■■□□ 2.42
PMS1-214ENST00000446877 ZBTB7BO15156 539 aaPredicted RBP30.15■■■□□ 2.42
PMS1-214ENST00000446877 LDHCP07864 332 aa30.14■■■□□ 2.42
PMS1-214ENST00000446877 GSTO1P78417 241 aa30.14■■■□□ 2.42
PMS1-214ENST00000446877 CCDC84Q86UT8 332 aaPredicted RBP30.14■■■□□ 2.42
PMS1-214ENST00000446877 MEIS3Q99687 375 aa30.14■■■□□ 2.42
PMS1-214ENST00000446877 SRGAP3O43295 1099 aa30.13■■■□□ 2.41
PMS1-214ENST00000446877 NPM3O75607 178 aaKnown RBP30.13■■■□□ 2.41
PMS1-214ENST00000446877 TFCP2Q12800 502 aa30.13■■■□□ 2.41
PMS1-214ENST00000446877 GORABQ5T7V8 394 aa30.13■■■□□ 2.41
PMS1-214ENST00000446877 NEUROD6Q96NK8 337 aa30.13■■■□□ 2.41
PMS1-214ENST00000446877 FRMD4AQ9P2Q2 1039 aaPredicted RBP30.13■■■□□ 2.41
PMS1-214ENST00000446877 MAP4K4O95819 1239 aaPredicted RBP30.12■■■□□ 2.41
PMS1-214ENST00000446877 RHBDL3P58872 404 aa30.12■■■□□ 2.41
PMS1-214ENST00000446877 SPP2Q13103 211 aa30.12■■■□□ 2.41
PMS1-214ENST00000446877 TREML2Q5T2D2 321 aa30.12■■■□□ 2.41
PMS1-214ENST00000446877 OSBPL5Q9H0X9 879 aaPredicted RBP30.12■■■□□ 2.41
PMS1-214ENST00000446877 PRO3102Q9H379 93 aa30.12■■■□□ 2.41
PMS1-214ENST00000446877 GNAI3P08754 354 aa30.11■■■□□ 2.41
PMS1-214ENST00000446877 PABPC4Q13310 644 aaKnown RBP eCLIP30.11■■■□□ 2.41
PMS1-214ENST00000446877 FAM110CQ1W6H9 321 aa30.11■■■□□ 2.41
PMS1-214ENST00000446877 PROCA1Q8NCQ7 364 aaPredicted RBP30.11■■■□□ 2.41
PMS1-214ENST00000446877 ZNF280CQ8ND82 737 aa30.11■■■□□ 2.41
PMS1-214ENST00000446877 PAK6Q9NQU5 681 aaPredicted RBP30.11■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms