RNA–Protein interactions for RNA: ENST00000446646.1

HDAC9-216, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-216ENST00000446646 ADGRA2Q96PE1 1338 aa9.19□□□□□ -0.94
HDAC9-216ENST00000446646 UNCXA6NJT0 531 aa9.18□□□□□ -0.94
HDAC9-216ENST00000446646 FMNL1O95466 1100 aaPredicted RBP9.18□□□□□ -0.94
HDAC9-216ENST00000446646 PLA2G5P39877 138 aa9.18□□□□□ -0.94
HDAC9-216ENST00000446646 GTF2A2P52657 109 aa9.18□□□□□ -0.94
HDAC9-216ENST00000446646 KIF22Q14807 665 aa9.18□□□□□ -0.94
HDAC9-216ENST00000446646 SUPT20HL1Q3ZLR7 823 aa9.18□□□□□ -0.94
HDAC9-216ENST00000446646 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.18□□□□□ -0.94
HDAC9-216ENST00000446646 DLG5Q8TDM6 1919 aa9.18□□□□□ -0.94
HDAC9-216ENST00000446646 MYO3BQ8WXR4 1341 aa9.18□□□□□ -0.94
HDAC9-216ENST00000446646 PLEKHF1Q96S99 279 aa9.18□□□□□ -0.94
HDAC9-216ENST00000446646 COA1Q9GZY4 146 aa9.18□□□□□ -0.94
HDAC9-216ENST00000446646 SNCAIPQ9Y6H5 919 aa9.18□□□□□ -0.94
HDAC9-216ENST00000446646 SOWAHBA6NEL2 793 aa9.17□□□□□ -0.94
HDAC9-216ENST00000446646 SMAPO00193 183 aa9.17□□□□□ -0.94
HDAC9-216ENST00000446646 IRF6O14896 467 aa9.17□□□□□ -0.94
HDAC9-216ENST00000446646 EIF5BO60841 1220 aaKnown RBP9.17□□□□□ -0.94
HDAC9-216ENST00000446646 TFRCP02786 760 aaKnown RBP9.17□□□□□ -0.94
HDAC9-216ENST00000446646 INHAP05111 366 aa9.17□□□□□ -0.94
HDAC9-216ENST00000446646 CCT4P50991 539 aaKnown RBP9.17□□□□□ -0.94
HDAC9-216ENST00000446646 NFE2L2Q16236 605 aa9.17□□□□□ -0.94
HDAC9-216ENST00000446646 ANKRD18AQ8IVF6 992 aa9.17□□□□□ -0.94
HDAC9-216ENST00000446646 ZBTB38Q8NAP3 1195 aaPredicted RBP9.17□□□□□ -0.94
HDAC9-216ENST00000446646 MTMR14Q8NCE2 650 aa9.17□□□□□ -0.94
HDAC9-216ENST00000446646 TMEM39BQ9GZU3 492 aa9.17□□□□□ -0.94
HDAC9-216ENST00000446646 FAM198AQ9UFP1 575 aa9.17□□□□□ -0.94
HDAC9-216ENST00000446646 NUDCQ9Y266 331 aa9.17□□□□□ -0.94
HDAC9-216ENST00000446646 PPP2R3BQ9Y5P8 575 aa9.17□□□□□ -0.94
HDAC9-216ENST00000446646 GNRH1P01148 92 aa9.16□□□□□ -0.94
HDAC9-216ENST00000446646 PPP2R1AP30153 589 aa9.16□□□□□ -0.94
HDAC9-216ENST00000446646 PRMT2P55345 433 aa9.16□□□□□ -0.94
HDAC9-216ENST00000446646 TRIM28Q13263 835 aaKnown RBP9.16□□□□□ -0.94
HDAC9-216ENST00000446646 MOGSQ13724 837 aa9.16□□□□□ -0.94
HDAC9-216ENST00000446646 CCDC152Q4G0S7 254 aa9.16□□□□□ -0.94
HDAC9-216ENST00000446646 GPIHBP1Q8IV16 184 aa9.16□□□□□ -0.94
HDAC9-216ENST00000446646 ZKSCAN4Q969J2 545 aaPredicted RBP9.16□□□□□ -0.94
HDAC9-216ENST00000446646 CFAP53Q96M91 514 aa9.16□□□□□ -0.94
HDAC9-216ENST00000446646 CDX2Q99626 313 aaPredicted RBP9.16□□□□□ -0.94
HDAC9-216ENST00000446646 UBE2OQ9C0C9 1292 aaKnown RBP9.16□□□□□ -0.94
HDAC9-216ENST00000446646 GREM2Q9H772 168 aa9.16□□□□□ -0.94
HDAC9-216ENST00000446646 SLC24A3Q9HC58 644 aa9.16□□□□□ -0.94
HDAC9-216ENST00000446646 SPDYE5A6NIY4 337 aa9.15□□□□□ -0.94
HDAC9-216ENST00000446646 ZMYND10O75800 440 aa9.15□□□□□ -0.94
HDAC9-216ENST00000446646 MAFAQ8NHW3 353 aaPredicted RBP9.15□□□□□ -0.94
HDAC9-216ENST00000446646 PAK6Q9NQU5 681 aaPredicted RBP9.15□□□□□ -0.94
HDAC9-216ENST00000446646 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.15□□□□□ -0.94
HDAC9-216ENST00000446646 PNMA3Q9UL41 463 aa9.15□□□□□ -0.94
HDAC9-216ENST00000446646 CACNA1AO00555 2505 aa9.15□□□□□ -0.94
HDAC9-216ENST00000446646 REV3LO60673 3130 aa9.15□□□□□ -0.95
HDAC9-216ENST00000446646 TCP10L2B9ZVM9 353 aa9.14□□□□□ -0.95
HDAC9-216ENST00000446646 ADCY3O60266 1144 aa9.14□□□□□ -0.95
HDAC9-216ENST00000446646 PDE8AO60658 829 aa9.14□□□□□ -0.95
HDAC9-216ENST00000446646 CYP2C8P10632 490 aa9.14□□□□□ -0.95
HDAC9-216ENST00000446646 CETPP11597 493 aa9.14□□□□□ -0.95
HDAC9-216ENST00000446646 FLT3LGP49771 235 aa9.14□□□□□ -0.95
HDAC9-216ENST00000446646 UBXN2AP68543 259 aa9.14□□□□□ -0.95
HDAC9-216ENST00000446646 MDM2Q00987 491 aaPredicted RBP9.14□□□□□ -0.95
HDAC9-216ENST00000446646 USP38Q8NB14 1042 aa9.14□□□□□ -0.95
HDAC9-216ENST00000446646 TATDN2Q93075 761 aa9.14□□□□□ -0.95
HDAC9-216ENST00000446646 MYD88Q99836 296 aa9.14□□□□□ -0.95
HDAC9-216ENST00000446646 TDRD3Q9H7E2 651 aaKnown RBP9.14□□□□□ -0.95
HDAC9-216ENST00000446646 CD209Q9NNX6 404 aa9.14□□□□□ -0.95
HDAC9-216ENST00000446646 BSDC1Q9NW68 430 aaPredicted RBP9.14□□□□□ -0.95
HDAC9-216ENST00000446646 ZNF70Q9UC06 446 aaPredicted RBP9.14□□□□□ -0.95
HDAC9-216ENST00000446646 MUC6Q6W4X9 2439 aa9.14□□□□□ -0.95
HDAC9-216ENST00000446646 CHD9Q3L8U1 2897 aa9.13□□□□□ -0.95
HDAC9-216ENST00000446646 PDHXO00330 501 aa9.13□□□□□ -0.95
HDAC9-216ENST00000446646 PCCAP05165 728 aaPredicted RBP9.13□□□□□ -0.95
HDAC9-216ENST00000446646 BCRP11274 1271 aa9.13□□□□□ -0.95
HDAC9-216ENST00000446646 CACNB3P54284 484 aa9.13□□□□□ -0.95
HDAC9-216ENST00000446646 CTSWP56202 376 aa9.13□□□□□ -0.95
HDAC9-216ENST00000446646 TRIM32Q13049 653 aa9.13□□□□□ -0.95
HDAC9-216ENST00000446646 FAM109BQ6ICB4 259 aaPredicted RBP9.13□□□□□ -0.95
HDAC9-216ENST00000446646 PADI6Q6TGC4 694 aa9.13□□□□□ -0.95
HDAC9-216ENST00000446646 NECAB2Q7Z6G3 386 aa9.13□□□□□ -0.95
HDAC9-216ENST00000446646 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.13□□□□□ -0.95
HDAC9-216ENST00000446646 MYLIPQ8WY64 445 aa9.13□□□□□ -0.95
HDAC9-216ENST00000446646 FAM122AQ96E09 287 aa9.13□□□□□ -0.95
HDAC9-216ENST00000446646 PHAXQ9H814 394 aaKnown RBP9.13□□□□□ -0.95
HDAC9-216ENST00000446646 NPDC1Q9NQX5 325 aaPredicted RBP9.13□□□□□ -0.95
HDAC9-216ENST00000446646 COL2A1P02458 1487 aaPredicted RBP9.13□□□□□ -0.95
HDAC9-216ENST00000446646 PFASO15067 1338 aa9.12□□□□□ -0.95
HDAC9-216ENST00000446646 TMEM265A0A087WTH1 108 aa9.12□□□□□ -0.95
HDAC9-216ENST00000446646 C3orf80F5H4A9 247 aa9.12□□□□□ -0.95
HDAC9-216ENST00000446646 HOXD10P28358 340 aa9.12□□□□□ -0.95
HDAC9-216ENST00000446646 MMP14P50281 582 aa9.12□□□□□ -0.95
HDAC9-216ENST00000446646 RBM5P52756 815 aaKnown RBP eCLIP9.12□□□□□ -0.95
HDAC9-216ENST00000446646 SNAPC2Q13487 334 aa9.12□□□□□ -0.95
HDAC9-216ENST00000446646 GRIK5Q16478 980 aa9.12□□□□□ -0.95
HDAC9-216ENST00000446646 HDGFL1Q5TGJ6 251 aa9.12□□□□□ -0.95
HDAC9-216ENST00000446646 NUDT18Q6ZVK8 323 aa9.12□□□□□ -0.95
HDAC9-216ENST00000446646 TTLL11Q8NHH1 800 aa9.12□□□□□ -0.95
HDAC9-216ENST00000446646 TTYH1Q9H313 450 aaPredicted RBP9.12□□□□□ -0.95
HDAC9-216ENST00000446646 CSADQ9Y600 493 aa9.12□□□□□ -0.95
HDAC9-216ENST00000446646 SPEF2Q9C093 1822 aa9.12□□□□□ -0.95
HDAC9-216ENST00000446646 CHD7Q9P2D1 2997 aa9.11□□□□□ -0.95
HDAC9-216ENST00000446646 TNFRSF10AO00220 468 aa9.11□□□□□ -0.95
HDAC9-216ENST00000446646 MYO1BO43795 1136 aa9.11□□□□□ -0.95
HDAC9-216ENST00000446646 PPIL2Q13356 520 aa9.11□□□□□ -0.95
HDAC9-216ENST00000446646 GPAT2Q6NUI2 795 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms