RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 ZSCAN29Q8IWY8 852 aaPredicted RBP20.77■□□□□ 0.92
SGCE-206ENST00000445866 DCPSQ96C86 337 aaKnown RBP20.77■□□□□ 0.92
SGCE-206ENST00000445866 FLT1P17948 1338 aa20.77■□□□□ 0.92
SGCE-206ENST00000445866 ENTPD3O75355 529 aa20.77■□□□□ 0.91
SGCE-206ENST00000445866 NPM3O75607 178 aaKnown RBP20.77■□□□□ 0.91
SGCE-206ENST00000445866 TNNI2P48788 182 aa20.77■□□□□ 0.91
SGCE-206ENST00000445866 TNFAIP1Q13829 316 aa20.77■□□□□ 0.91
SGCE-206ENST00000445866 RASA3Q14644 834 aa20.77■□□□□ 0.91
SGCE-206ENST00000445866 PALD1Q9ULE6 856 aa20.77■□□□□ 0.91
SGCE-206ENST00000445866 RBM8AQ9Y5S9 174 aaKnown RBP20.77■□□□□ 0.91
SGCE-206ENST00000445866 MINDY4BA8MYZ0 360 aa20.76■□□□□ 0.91
SGCE-206ENST00000445866 CTR9Q6PD62 1173 aa20.76■□□□□ 0.91
SGCE-206ENST00000445866 APOBEC3FQ8IUX4 373 aaKnown RBP20.76■□□□□ 0.91
SGCE-206ENST00000445866 AMOTL1Q8IY63 956 aa20.76■□□□□ 0.91
SGCE-206ENST00000445866 FAM151AQ8WW52 585 aa20.76■□□□□ 0.91
SGCE-206ENST00000445866 OSBPL5Q9H0X9 879 aaPredicted RBP20.76■□□□□ 0.91
SGCE-206ENST00000445866 DEFB129Q9H1M3 183 aa20.76■□□□□ 0.91
SGCE-206ENST00000445866 GPBP1L1Q9HC44 474 aaPredicted RBP20.76■□□□□ 0.91
SGCE-206ENST00000445866 SLC4A8Q2Y0W8 1093 aa20.75■□□□□ 0.91
SGCE-206ENST00000445866 FAM83AQ86UY5 434 aa20.75■□□□□ 0.91
SGCE-206ENST00000445866 UPF2Q9HAU5 1272 aaKnown RBP20.75■□□□□ 0.91
SGCE-206ENST00000445866 PGAP2Q9UHJ9 254 aa20.75■□□□□ 0.91
SGCE-206ENST00000445866 ZNF213O14771 459 aa20.74■□□□□ 0.91
SGCE-206ENST00000445866 YY1P25490 414 aa20.74■□□□□ 0.91
SGCE-206ENST00000445866 TMEM39BQ9GZU3 492 aa20.74■□□□□ 0.91
SGCE-206ENST00000445866 CCDC88AQ3V6T2 1871 aa20.74■□□□□ 0.91
SGCE-206ENST00000445866 CYP2D7A0A087X1C5 515 aa20.73■□□□□ 0.91
SGCE-206ENST00000445866 EPB41L2O43491 1005 aaKnown RBP20.73■□□□□ 0.91
SGCE-206ENST00000445866 TTC6Q86TZ1 520 aa20.73■□□□□ 0.91
SGCE-206ENST00000445866 SULF1Q8IWU6 871 aa20.73■□□□□ 0.91
SGCE-206ENST00000445866 DHX36Q9H2U1 1008 aaKnown RBP20.73■□□□□ 0.91
SGCE-206ENST00000445866 POTEIP0CG38 1075 aa20.73■□□□□ 0.91
SGCE-206ENST00000445866 POTEJP0CG39 1038 aa20.73■□□□□ 0.91
SGCE-206ENST00000445866 CYP2D6P10635 497 aa20.73■□□□□ 0.91
SGCE-206ENST00000445866 HAND2P61296 217 aa20.73■□□□□ 0.91
SGCE-206ENST00000445866 NECTIN1Q15223 517 aa20.73■□□□□ 0.91
SGCE-206ENST00000445866 IMMTQ16891 758 aaKnown RBP20.73■□□□□ 0.91
SGCE-206ENST00000445866 SBK1Q52WX2 424 aa20.73■□□□□ 0.91
SGCE-206ENST00000445866 C12orf60Q5U649 245 aa20.73■□□□□ 0.91
SGCE-206ENST00000445866 KRT26Q7Z3Y9 468 aa20.73■□□□□ 0.91
SGCE-206ENST00000445866 USP48Q86UV5 1035 aa20.73■□□□□ 0.91
SGCE-206ENST00000445866 DICER1Q9UPY3 1922 aaKnown RBP20.73■□□□□ 0.91
SGCE-206ENST00000445866 PITPNM2Q9BZ72 1349 aa20.72■□□□□ 0.91
SGCE-206ENST00000445866 DDTLA6NHG4 134 aaPredicted RBP20.72■□□□□ 0.91
SGCE-206ENST00000445866 PLCD1P51178 756 aa20.72■□□□□ 0.91
SGCE-206ENST00000445866 SH3BP5LQ7L8J4 393 aa20.72■□□□□ 0.91
SGCE-206ENST00000445866 ARPP21Q9UBL0 812 aaPredicted RBP20.72■□□□□ 0.91
SGCE-206ENST00000445866 CNTNAP1P78357 1384 aa20.72■□□□□ 0.91
SGCE-206ENST00000445866 MCCP23508 829 aa20.71■□□□□ 0.91
SGCE-206ENST00000445866 PRAMEF18Q5VWM3 479 aa20.71■□□□□ 0.91
SGCE-206ENST00000445866 CREB3L3Q68CJ9 461 aa20.71■□□□□ 0.91
SGCE-206ENST00000445866 STK11IPQ8N1F8 1099 aa20.71■□□□□ 0.91
SGCE-206ENST00000445866 PI4KBQ9UBF8 816 aa20.71■□□□□ 0.91
SGCE-206ENST00000445866 HLA-DOAP06340 250 aa20.7■□□□□ 0.91
SGCE-206ENST00000445866 PPARAQ07869 468 aa20.7■□□□□ 0.91
SGCE-206ENST00000445866 RNF20Q5VTR2 975 aa20.7■□□□□ 0.91
SGCE-206ENST00000445866 LDHDQ86WU2 507 aa20.7■□□□□ 0.91
SGCE-206ENST00000445866 CSRNP1Q96S65 589 aa20.7■□□□□ 0.91
SGCE-206ENST00000445866 TIAM2Q8IVF5 1701 aa20.7■□□□□ 0.9
SGCE-206ENST00000445866 SMIM22K7EJ46 135 aa20.7■□□□□ 0.9
SGCE-206ENST00000445866 SLC27A2O14975 620 aa20.7■□□□□ 0.9
SGCE-206ENST00000445866 CTDSPL2Q05D32 466 aa20.7■□□□□ 0.9
SGCE-206ENST00000445866 MAP1SQ66K74 1059 aaPredicted RBP20.7■□□□□ 0.9
SGCE-206ENST00000445866 CDC37L1Q7L3B6 337 aa20.7■□□□□ 0.9
SGCE-206ENST00000445866 ZMYM6O95789 1325 aa20.69■□□□□ 0.9
SGCE-206ENST00000445866 SLC3A2P08195 630 aaKnown RBP20.69■□□□□ 0.9
SGCE-206ENST00000445866 CYP21A2P08686 494 aa20.69■□□□□ 0.9
SGCE-206ENST00000445866 ZKSCAN1P17029 563 aaPredicted RBP20.69■□□□□ 0.9
SGCE-206ENST00000445866 HSPA4P34932 840 aa20.69■□□□□ 0.9
SGCE-206ENST00000445866 EVX2Q03828 476 aa20.69■□□□□ 0.9
SGCE-206ENST00000445866 FOXP4Q8IVH2 680 aaPredicted RBP20.69■□□□□ 0.9
SGCE-206ENST00000445866 C22orf23Q9BZE7 217 aa20.69■□□□□ 0.9
SGCE-206ENST00000445866 DOCK2Q92608 1830 aa20.69■□□□□ 0.9
SGCE-206ENST00000445866 ADM5C9JUS6 153 aa20.68■□□□□ 0.9
SGCE-206ENST00000445866 DLK2Q6UY11 383 aa20.68■□□□□ 0.9
SGCE-206ENST00000445866 CDAN1Q8IWY9 1227 aa20.68■□□□□ 0.9
SGCE-206ENST00000445866 DYNLL2Q96FJ2 89 aa20.68■□□□□ 0.9
SGCE-206ENST00000445866 TEPSINQ96N21 525 aa20.68■□□□□ 0.9
SGCE-206ENST00000445866 ANAPC4Q9UJX5 808 aa20.68■□□□□ 0.9
SGCE-206ENST00000445866 PPP2R3BQ9Y5P8 575 aa20.68■□□□□ 0.9
SGCE-206ENST00000445866 MYH13Q9UKX3 1938 aa20.68■□□□□ 0.9
SGCE-206ENST00000445866 NBPF12Q5TAG4 269 aaPredicted RBP20.67■□□□□ 0.9
SGCE-206ENST00000445866 CRACR2BQ8N4Y2 399 aaPredicted RBP20.67■□□□□ 0.9
SGCE-206ENST00000445866 TRIM34Q9BYJ4 488 aa20.67■□□□□ 0.9
SGCE-206ENST00000445866 GLIS2Q9BZE0 524 aaPredicted RBP20.67■□□□□ 0.9
SGCE-206ENST00000445866 ZNF646O15015 1829 aaPredicted RBP20.67■□□□□ 0.9
SGCE-206ENST00000445866 SUPT20HL1Q3ZLR7 823 aa20.67■□□□□ 0.9
SGCE-206ENST00000445866 MIGA2Q7L4E1 593 aa20.67■□□□□ 0.9
SGCE-206ENST00000445866 RASEFQ8IZ41 740 aa20.67■□□□□ 0.9
SGCE-206ENST00000445866 INCENPQ9NQS7 918 aa20.67■□□□□ 0.9
SGCE-206ENST00000445866 SERPINB13Q9UIV8 391 aa20.67■□□□□ 0.9
SGCE-206ENST00000445866 TAF6LQ9Y6J9 622 aa20.67■□□□□ 0.9
SGCE-206ENST00000445866 PSME4Q14997 1843 aa20.67■□□□□ 0.9
SGCE-206ENST00000445866 MFSD6Q6ZSS7 791 aa20.66■□□□□ 0.9
SGCE-206ENST00000445866 MKNK2Q9HBH9 465 aa20.66■□□□□ 0.9
SGCE-206ENST00000445866 MYO5AQ9Y4I1 1855 aaKnown RBP20.65■□□□□ 0.9
SGCE-206ENST00000445866 SLURP2P0DP57 97 aa20.65■□□□□ 0.9
SGCE-206ENST00000445866 PDE4BQ07343 736 aa20.65■□□□□ 0.9
SGCE-206ENST00000445866 AKNAD1Q5T1N1 836 aa20.65■□□□□ 0.9
SGCE-206ENST00000445866 KCNB2Q92953 911 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms