RNA–Protein interactions for RNA: ENST00000445357.1

NCLP1-201, Transcript of nucleolin pseudogene 1, humanhuman

BASIC

Gene NCLP1, Length 1,963 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP1-201ENST00000445357 ANAPC4Q9UJX5 808 aa16.44■□□□□ 0.22
NCLP1-201ENST00000445357 MINPP1Q9UNW1 487 aa16.44■□□□□ 0.22
NCLP1-201ENST00000445357 SLC12A7Q9Y666 1083 aa16.44■□□□□ 0.22
NCLP1-201ENST00000445357 MYH6P13533 1939 aa16.43■□□□□ 0.22
NCLP1-201ENST00000445357 GOLGA6L6A8MZA4 724 aa16.43■□□□□ 0.22
NCLP1-201ENST00000445357 RANBP6O60518 1105 aaKnown RBP16.43■□□□□ 0.22
NCLP1-201ENST00000445357 RPS6KA4O75676 772 aa16.43■□□□□ 0.22
NCLP1-201ENST00000445357 RXRAP19793 462 aa16.43■□□□□ 0.22
NCLP1-201ENST00000445357 GYG1P46976 350 aa16.43■□□□□ 0.22
NCLP1-201ENST00000445357 SF3A1Q15459 793 aaKnown RBP16.43■□□□□ 0.22
NCLP1-201ENST00000445357 TBC1D9BQ66K14 1250 aa16.43■□□□□ 0.22
NCLP1-201ENST00000445357 MIGA1Q8NAN2 632 aa16.43■□□□□ 0.22
NCLP1-201ENST00000445357 KIAA1551Q9HCM1 1747 aa16.43■□□□□ 0.22
NCLP1-201ENST00000445357 BAZ2AQ9UIF9 1905 aaKnown RBP16.43■□□□□ 0.22
NCLP1-201ENST00000445357 DUOX1Q9NRD9 1551 aa16.43■□□□□ 0.22
NCLP1-201ENST00000445357 PDS5AQ29RF7 1337 aaKnown RBP16.42■□□□□ 0.22
NCLP1-201ENST00000445357 CCDC69A6NI79 296 aa16.42■□□□□ 0.22
NCLP1-201ENST00000445357 SEMA3EO15041 775 aa16.42■□□□□ 0.22
NCLP1-201ENST00000445357 IFNAR1P17181 557 aa16.42■□□□□ 0.22
NCLP1-201ENST00000445357 RBM6P78332 1123 aaKnown RBP16.42■□□□□ 0.22
NCLP1-201ENST00000445357 IQCB1Q15051 598 aa16.42■□□□□ 0.22
NCLP1-201ENST00000445357 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.42■□□□□ 0.22
NCLP1-201ENST00000445357 ADGRA1Q86SQ6 560 aa16.42■□□□□ 0.22
NCLP1-201ENST00000445357 PLA2G4DQ86XP0 818 aa16.42■□□□□ 0.22
NCLP1-201ENST00000445357 VPS37DQ86XT2 251 aa16.42■□□□□ 0.22
NCLP1-201ENST00000445357 AIFM3Q96NN9 605 aa16.42■□□□□ 0.22
NCLP1-201ENST00000445357 TTC12Q9H892 705 aaPredicted RBP16.42■□□□□ 0.22
NCLP1-201ENST00000445357 TRPC5Q9UL62 973 aaPredicted RBP16.42■□□□□ 0.22
NCLP1-201ENST00000445357 LAMB1P07942 1786 aa16.42■□□□□ 0.22
NCLP1-201ENST00000445357 MYH2Q9UKX2 1941 aa16.42■□□□□ 0.22
NCLP1-201ENST00000445357 CCDC88AQ3V6T2 1871 aa16.42■□□□□ 0.22
NCLP1-201ENST00000445357 MAGEB6P1A0A0J9YX57 407 aa16.42■□□□□ 0.22
NCLP1-201ENST00000445357 FMNL1O95466 1100 aaPredicted RBP16.42■□□□□ 0.22
NCLP1-201ENST00000445357 PPARAQ07869 468 aa16.42■□□□□ 0.22
NCLP1-201ENST00000445357 SART3Q15020 963 aaKnown RBP16.42■□□□□ 0.22
NCLP1-201ENST00000445357 SLC39A14Q15043 492 aa16.42■□□□□ 0.22
NCLP1-201ENST00000445357 CAVIN4Q5BKX8 364 aa16.42■□□□□ 0.22
NCLP1-201ENST00000445357 CELF1Q92879 486 aaKnown RBP16.42■□□□□ 0.22
NCLP1-201ENST00000445357 PHKBQ93100 1093 aa16.42■□□□□ 0.22
NCLP1-201ENST00000445357 RIOK1Q9BRS2 568 aaKnown RBP16.42■□□□□ 0.22
NCLP1-201ENST00000445357 SBF2Q86WG5 1849 aa16.41■□□□□ 0.22
NCLP1-201ENST00000445357 ZBTB22O15209 634 aa16.41■□□□□ 0.22
NCLP1-201ENST00000445357 U2AF2P26368 475 aaKnown RBP eCLIP16.41■□□□□ 0.22
NCLP1-201ENST00000445357 ZNF75DP51815 510 aa16.41■□□□□ 0.22
NCLP1-201ENST00000445357 AXDND1Q5T1B0 1012 aaPredicted RBP16.41■□□□□ 0.22
NCLP1-201ENST00000445357 SARM1Q6SZW1 724 aa16.41■□□□□ 0.22
NCLP1-201ENST00000445357 TMTC2Q8N394 836 aa16.41■□□□□ 0.22
NCLP1-201ENST00000445357 FAM84BQ96KN1 310 aaPredicted RBP16.41■□□□□ 0.22
NCLP1-201ENST00000445357 ZNF830Q96NB3 372 aaPredicted RBP16.41■□□□□ 0.22
NCLP1-201ENST00000445357 ANO10Q9NW15 660 aa16.41■□□□□ 0.22
NCLP1-201ENST00000445357 RAI14Q9P0K7 980 aa16.41■□□□□ 0.22
NCLP1-201ENST00000445357 NDUFA8P51970 172 aa16.4■□□□□ 0.22
NCLP1-201ENST00000445357 SSRP1Q08945 709 aaKnown RBP16.4■□□□□ 0.22
NCLP1-201ENST00000445357 WTAPQ15007 396 aa16.4■□□□□ 0.22
NCLP1-201ENST00000445357 C11orf57Q6ZUT1 292 aaPredicted RBP16.4■□□□□ 0.22
NCLP1-201ENST00000445357 FBXO33Q7Z6M2 555 aa16.4■□□□□ 0.22
NCLP1-201ENST00000445357 MPNDQ8N594 471 aa16.4■□□□□ 0.22
NCLP1-201ENST00000445357 WASF1Q92558 559 aa16.4■□□□□ 0.22
NCLP1-201ENST00000445357 MYL10Q9BUA6 226 aa16.4■□□□□ 0.22
NCLP1-201ENST00000445357 ABCF2Q9UG63 623 aa16.4■□□□□ 0.22
NCLP1-201ENST00000445357 IQSEC3Q9UPP2 1182 aaPredicted RBP16.4■□□□□ 0.22
NCLP1-201ENST00000445357 A0A1B0GVL5 298 aa16.4■□□□□ 0.22
NCLP1-201ENST00000445357 PPP6R2O75170 966 aa16.4■□□□□ 0.22
NCLP1-201ENST00000445357 CMA1P23946 247 aa16.4■□□□□ 0.22
NCLP1-201ENST00000445357 GTF2E1P29083 439 aaPredicted RBP16.4■□□□□ 0.22
NCLP1-201ENST00000445357 KCNQ4P56696 695 aa16.4■□□□□ 0.22
NCLP1-201ENST00000445357 TRIM29Q14134 588 aa16.4■□□□□ 0.22
NCLP1-201ENST00000445357 CCDC144CPQ8IYA2 1237 aa16.4■□□□□ 0.22
NCLP1-201ENST00000445357 KCNF1Q9H3M0 494 aa16.4■□□□□ 0.22
NCLP1-201ENST00000445357 SPTLC3Q9NUV7 552 aa16.4■□□□□ 0.22
NCLP1-201ENST00000445357 TNRC6CQ9HCJ0 1690 aaKnown RBP16.39■□□□□ 0.21
NCLP1-201ENST00000445357 CDC25BP30305 580 aa16.39■□□□□ 0.21
NCLP1-201ENST00000445357 BICDL1Q6ZP65 573 aa16.39■□□□□ 0.21
NCLP1-201ENST00000445357 PTF1AQ7RTS3 328 aa16.39■□□□□ 0.21
NCLP1-201ENST00000445357 SETDB2Q96T68 719 aa16.39■□□□□ 0.21
NCLP1-201ENST00000445357 BRIP1Q9BX63 1249 aa16.39■□□□□ 0.21
NCLP1-201ENST00000445357 FAM237AA0A1B0GTK4 181 aa16.38■□□□□ 0.21
NCLP1-201ENST00000445357 ERICH2A1L162 156 aa16.38■□□□□ 0.21
NCLP1-201ENST00000445357 WTIPA6NIX2 430 aaPredicted RBP16.38■□□□□ 0.21
NCLP1-201ENST00000445357 RPS8P62241 208 aaKnown RBP16.38■□□□□ 0.21
NCLP1-201ENST00000445357 PTPAQ15257 358 aa16.38■□□□□ 0.21
NCLP1-201ENST00000445357 RTN1Q16799 776 aa16.38■□□□□ 0.21
NCLP1-201ENST00000445357 RRP12Q5JTH9 1297 aaKnown RBP16.38■□□□□ 0.21
NCLP1-201ENST00000445357 NLRP3Q96P20 1036 aa16.38■□□□□ 0.21
NCLP1-201ENST00000445357 SLC26A6Q9BXS9 759 aa16.38■□□□□ 0.21
NCLP1-201ENST00000445357 ANKRD2Q9GZV1 360 aa16.38■□□□□ 0.21
NCLP1-201ENST00000445357 CCDC196A0A1B0GTZ2 297 aa16.38■□□□□ 0.21
NCLP1-201ENST00000445357 NOLC1Q14978 699 aaKnown RBP eCLIP16.38■□□□□ 0.21
NCLP1-201ENST00000445357 JMYQ8N9B5 988 aa16.38■□□□□ 0.21
NCLP1-201ENST00000445357 SPC24Q8NBT2 197 aa16.38■□□□□ 0.21
NCLP1-201ENST00000445357 SDR42E1Q8WUS8 393 aa16.38■□□□□ 0.21
NCLP1-201ENST00000445357 MAP3K14Q99558 947 aa16.38■□□□□ 0.21
NCLP1-201ENST00000445357 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.38■□□□□ 0.21
NCLP1-201ENST00000445357 TRIM5Q9C035 493 aa16.38■□□□□ 0.21
NCLP1-201ENST00000445357 TOMM22Q9NS69 142 aa16.38■□□□□ 0.21
NCLP1-201ENST00000445357 SRP68Q9UHB9 627 aaKnown RBP16.38■□□□□ 0.21
NCLP1-201ENST00000445357 GOLGA6L19H0YKK7 550 aa16.37■□□□□ 0.21
NCLP1-201ENST00000445357 PCP11498 1178 aaKnown RBP16.37■□□□□ 0.21
NCLP1-201ENST00000445357 SEC23AQ15436 765 aa16.37■□□□□ 0.21
NCLP1-201ENST00000445357 TMED8Q6PL24 325 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms