RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 PIK3R5Q8WYR1 880 aa8.71□□□□□ -1.02
BRAFP1-201ENST00000445336 COA1Q9GZY4 146 aa8.71□□□□□ -1.02
BRAFP1-201ENST00000445336 FAM86C1Q9NVL1 165 aa8.71□□□□□ -1.02
BRAFP1-201ENST00000445336 RANBP2P49792 3224 aaKnown RBP8.71□□□□□ -1.02
BRAFP1-201ENST00000445336 NCK2O43639 380 aa8.7□□□□□ -1.02
BRAFP1-201ENST00000445336 SIGLEC14Q08ET2 396 aa8.7□□□□□ -1.02
BRAFP1-201ENST00000445336 HSP90AB3PQ58FF7 597 aa8.7□□□□□ -1.02
BRAFP1-201ENST00000445336 BSDC1Q9NW68 430 aaPredicted RBP8.7□□□□□ -1.02
BRAFP1-201ENST00000445336 POLKQ9UBT6 870 aa8.7□□□□□ -1.02
BRAFP1-201ENST00000445336 ATP11BQ9Y2G3 1177 aa8.7□□□□□ -1.02
BRAFP1-201ENST00000445336 ZNF236Q9UL36 1845 aa8.7□□□□□ -1.02
BRAFP1-201ENST00000445336 RIMBP2O15034 1052 aa8.7□□□□□ -1.02
BRAFP1-201ENST00000445336 TIMP1P01033 207 aa8.7□□□□□ -1.02
BRAFP1-201ENST00000445336 ZXDAP98168 799 aa8.7□□□□□ -1.02
BRAFP1-201ENST00000445336 MFSD5Q6N075 450 aa8.7□□□□□ -1.02
BRAFP1-201ENST00000445336 GIGYF2Q6Y7W6 1299 aaKnown RBP8.7□□□□□ -1.02
BRAFP1-201ENST00000445336 PNMA3Q9UL41 463 aa8.7□□□□□ -1.02
BRAFP1-201ENST00000445336 NSFL1CQ9UNZ2 370 aaKnown RBP8.7□□□□□ -1.02
BRAFP1-201ENST00000445336 ZNF330Q9Y3S2 320 aaPredicted RBP8.7□□□□□ -1.02
BRAFP1-201ENST00000445336 ANKRD33Q7Z3H0 272 aa8.69□□□□□ -1.02
BRAFP1-201ENST00000445336 LGR6Q9HBX8 967 aa8.69□□□□□ -1.02
BRAFP1-201ENST00000445336 DDX20Q9UHI6 824 aaKnown RBP8.69□□□□□ -1.02
BRAFP1-201ENST00000445336 RAG1P15918 1043 aa8.69□□□□□ -1.02
BRAFP1-201ENST00000445336 PPP2R2DQ66LE6 453 aa8.69□□□□□ -1.02
BRAFP1-201ENST00000445336 KBTBD13C9JR72 458 aa8.68□□□□□ -1.02
BRAFP1-201ENST00000445336 SASH1O94885 1247 aa8.68□□□□□ -1.02
BRAFP1-201ENST00000445336 HSP90B1P14625 803 aaKnown RBP8.68□□□□□ -1.02
BRAFP1-201ENST00000445336 ZKSCAN1P17029 563 aaPredicted RBP8.68□□□□□ -1.02
BRAFP1-201ENST00000445336 DCAF15Q66K64 600 aa8.68□□□□□ -1.02
BRAFP1-201ENST00000445336 PRR23BQ6ZRT6 265 aa8.68□□□□□ -1.02
BRAFP1-201ENST00000445336 TRIB2Q92519 343 aa8.68□□□□□ -1.02
BRAFP1-201ENST00000445336 USP6NLQ92738 828 aa8.68□□□□□ -1.02
BRAFP1-201ENST00000445336 TEPSINQ96N21 525 aa8.68□□□□□ -1.02
BRAFP1-201ENST00000445336 PTPRFP10586 1907 aa8.68□□□□□ -1.02
BRAFP1-201ENST00000445336 ROBO3Q96MS0 1386 aa8.68□□□□□ -1.02
BRAFP1-201ENST00000445336 GPR179Q6PRD1 2367 aa8.68□□□□□ -1.02
BRAFP1-201ENST00000445336 TCERG1O14776 1098 aaKnown RBP8.68□□□□□ -1.02
BRAFP1-201ENST00000445336 IRF6O14896 467 aa8.68□□□□□ -1.02
BRAFP1-201ENST00000445336 PBX2P40425 430 aa8.68□□□□□ -1.02
BRAFP1-201ENST00000445336 FKBP1CQ5VVH2 108 aa8.68□□□□□ -1.02
BRAFP1-201ENST00000445336 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.68□□□□□ -1.02
BRAFP1-201ENST00000445336 MORF4L1Q9UBU8 362 aa8.68□□□□□ -1.02
BRAFP1-201ENST00000445336 PHF24Q9UPV7 400 aa8.68□□□□□ -1.02
BRAFP1-201ENST00000445336 MICALL1Q8N3F8 863 aa8.67□□□□□ -1.02
BRAFP1-201ENST00000445336 ZNF112Q9UJU3 913 aa8.67□□□□□ -1.02
BRAFP1-201ENST00000445336 SPDYE2BA6NHP3 402 aa8.67□□□□□ -1.02
BRAFP1-201ENST00000445336 SPDYE6P0CI01 402 aa8.67□□□□□ -1.02
BRAFP1-201ENST00000445336 TRIM60Q495X7 471 aa8.67□□□□□ -1.02
BRAFP1-201ENST00000445336 TMEM199Q8N511 208 aa8.67□□□□□ -1.02
BRAFP1-201ENST00000445336 GTF3C2Q8WUA4 911 aaPredicted RBP8.67□□□□□ -1.02
BRAFP1-201ENST00000445336 SEZ6LQ9BYH1 1024 aa8.67□□□□□ -1.02
BRAFP1-201ENST00000445336 TBC1D2Q9BYX2 928 aa8.67□□□□□ -1.02
BRAFP1-201ENST00000445336 YBX2Q9Y2T7 364 aaKnown RBP8.67□□□□□ -1.02
BRAFP1-201ENST00000445336 XDHP47989 1333 aa8.67□□□□□ -1.02
BRAFP1-201ENST00000445336 MROH7Q68CQ1 1323 aa8.67□□□□□ -1.02
BRAFP1-201ENST00000445336 SOWAHBA6NEL2 793 aa8.67□□□□□ -1.02
BRAFP1-201ENST00000445336 EVX2Q03828 476 aa8.67□□□□□ -1.02
BRAFP1-201ENST00000445336 RASA3Q14644 834 aa8.67□□□□□ -1.02
BRAFP1-201ENST00000445336 SPDYE2Q495Y8 402 aa8.67□□□□□ -1.02
BRAFP1-201ENST00000445336 PRDM5Q9NQX1 630 aaPredicted RBP8.67□□□□□ -1.02
BRAFP1-201ENST00000445336 A0A0G2JLL6 359 aaPredicted RBP8.66□□□□□ -1.02
BRAFP1-201ENST00000445336 CACNB2Q08289 660 aaPredicted RBP8.66□□□□□ -1.02
BRAFP1-201ENST00000445336 CBX2Q14781 532 aaPredicted RBP8.66□□□□□ -1.02
BRAFP1-201ENST00000445336 PRRT2Q7Z6L0 340 aaPredicted RBP8.66□□□□□ -1.02
BRAFP1-201ENST00000445336 PHOSPHO2Q8TCD6 241 aa8.66□□□□□ -1.02
BRAFP1-201ENST00000445336 CACNA1GO43497 2377 aa8.66□□□□□ -1.02
BRAFP1-201ENST00000445336 DIAPH1O60610 1272 aaKnown RBP8.66□□□□□ -1.02
BRAFP1-201ENST00000445336 IL23AQ9NPF7 189 aa8.66□□□□□ -1.02
BRAFP1-201ENST00000445336 EPG5Q9HCE0 2579 aa8.66□□□□□ -1.02
BRAFP1-201ENST00000445336 UFL1O94874 794 aa8.65□□□□□ -1.02
BRAFP1-201ENST00000445336 LMNAP02545 664 aaKnown RBP8.65□□□□□ -1.02
BRAFP1-201ENST00000445336 HAUS7Q99871 368 aa8.65□□□□□ -1.02
BRAFP1-201ENST00000445336 NUDT12Q9BQG2 462 aa8.65□□□□□ -1.02
BRAFP1-201ENST00000445336 FAM177BA6PVY3 158 aa8.65□□□□□ -1.03
BRAFP1-201ENST00000445336 PFKMP08237 780 aa8.65□□□□□ -1.03
BRAFP1-201ENST00000445336 IL9P15248 144 aa8.65□□□□□ -1.03
BRAFP1-201ENST00000445336 CDCA8Q53HL2 280 aa8.65□□□□□ -1.03
BRAFP1-201ENST00000445336 MFSD14CQ5VZR4 134 aa8.65□□□□□ -1.03
BRAFP1-201ENST00000445336 DDX1Q92499 740 aaKnown RBP8.65□□□□□ -1.03
BRAFP1-201ENST00000445336 RGS2P41220 211 aa8.64□□□□□ -1.03
BRAFP1-201ENST00000445336 RSPO4Q2I0M5 234 aaPredicted RBP8.64□□□□□ -1.03
BRAFP1-201ENST00000445336 APBA2Q99767 749 aa8.64□□□□□ -1.03
BRAFP1-201ENST00000445336 ZNF341Q9BYN7 854 aa8.64□□□□□ -1.03
BRAFP1-201ENST00000445336 NRBP1Q9UHY1 535 aa8.64□□□□□ -1.03
BRAFP1-201ENST00000445336 RALGAPA2Q2PPJ7 1873 aa8.64□□□□□ -1.03
BRAFP1-201ENST00000445336 TECTAO75443 2155 aa8.64□□□□□ -1.03
BRAFP1-201ENST00000445336 IGHA2P01877 340 aa8.64□□□□□ -1.03
BRAFP1-201ENST00000445336 PABPC4Q13310 644 aaKnown RBP eCLIP8.64□□□□□ -1.03
BRAFP1-201ENST00000445336 SLC44A5Q8NCS7 719 aa8.64□□□□□ -1.03
BRAFP1-201ENST00000445336 ANGPTL2Q9UKU9 493 aa8.64□□□□□ -1.03
BRAFP1-201ENST00000445336 TBX21Q9UL17 535 aa8.64□□□□□ -1.03
BRAFP1-201ENST00000445336 DOCK3Q8IZD9 2030 aa8.63□□□□□ -1.03
BRAFP1-201ENST00000445336 LMNB2Q03252 620 aa8.63□□□□□ -1.03
BRAFP1-201ENST00000445336 TEFQ10587 303 aa8.63□□□□□ -1.03
BRAFP1-201ENST00000445336 FRMD5Q7Z6J6 570 aa8.63□□□□□ -1.03
BRAFP1-201ENST00000445336 FAM83AQ86UY5 434 aa8.63□□□□□ -1.03
BRAFP1-201ENST00000445336 RNF135Q8IUD6 432 aa8.63□□□□□ -1.03
BRAFP1-201ENST00000445336 TSEN34Q9BSV6 310 aaKnown RBP8.63□□□□□ -1.03
BRAFP1-201ENST00000445336 SMAD2Q15796 467 aaKnown RBP8.63□□□□□ -1.03
BRAFP1-201ENST00000445336 ASIC4Q96FT7 647 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms