RNA–Protein interactions for RNA: ENST00000444987.1

LRRC42-204, Transcript of leucine rich repeat containing 42, humanhuman

TSL 5

Gene LRRC42, Length 1,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-204ENST00000444987 VGLL4Q14135 290 aa23.01■■□□□ 1.27
LRRC42-204ENST00000444987 WRNIP1Q96S55 665 aa23.01■■□□□ 1.27
LRRC42-204ENST00000444987 DDX4Q9NQI0 724 aaKnown RBP23.01■■□□□ 1.27
LRRC42-204ENST00000444987 FOCADQ5VW36 1801 aa23.01■■□□□ 1.27
LRRC42-204ENST00000444987 HDAC1Q13547 482 aaPredicted RBP23■■□□□ 1.27
LRRC42-204ENST00000444987 ZSCAN29Q8IWY8 852 aaPredicted RBP23■■□□□ 1.27
LRRC42-204ENST00000444987 TEX11Q8IYF3 940 aa23■■□□□ 1.27
LRRC42-204ENST00000444987 ANTXR1Q9H6X2 564 aa23■■□□□ 1.27
LRRC42-204ENST00000444987 RNF186Q9NXI6 227 aa23■■□□□ 1.27
LRRC42-204ENST00000444987 ALDH1A1P00352 501 aa22.99■■□□□ 1.27
LRRC42-204ENST00000444987 CYP7A1P22680 504 aa22.99■■□□□ 1.27
LRRC42-204ENST00000444987 PICALMQ13492 652 aa22.99■■□□□ 1.27
LRRC42-204ENST00000444987 COL13A1Q5TAT6 717 aaPredicted RBP22.99■■□□□ 1.27
LRRC42-204ENST00000444987 ZFPM1Q8IX07 1006 aa22.99■■□□□ 1.27
LRRC42-204ENST00000444987 OPTNQ96CV9 577 aa22.99■■□□□ 1.27
LRRC42-204ENST00000444987 GPATCH3Q96I76 525 aa22.99■■□□□ 1.27
LRRC42-204ENST00000444987 HAUS7Q99871 368 aa22.99■■□□□ 1.27
LRRC42-204ENST00000444987 ELP3Q9H9T3 547 aa22.99■■□□□ 1.27
LRRC42-204ENST00000444987 AATFQ9NY61 560 aaKnown RBP eCLIP22.99■■□□□ 1.27
LRRC42-204ENST00000444987 SPDYE5A6NIY4 337 aa22.98■■□□□ 1.27
LRRC42-204ENST00000444987 TBC1D12O60347 775 aa22.98■■□□□ 1.27
LRRC42-204ENST00000444987 NOL9Q5SY16 702 aaKnown RBP22.98■■□□□ 1.27
LRRC42-204ENST00000444987 MIGA2Q7L4E1 593 aa22.98■■□□□ 1.27
LRRC42-204ENST00000444987 SH3BP5LQ7L8J4 393 aa22.98■■□□□ 1.27
LRRC42-204ENST00000444987 ADGRA1Q86SQ6 560 aa22.98■■□□□ 1.27
LRRC42-204ENST00000444987 ERO1BQ86YB8 467 aa22.98■■□□□ 1.27
LRRC42-204ENST00000444987 MAGEB6Q8N7X4 407 aa22.98■■□□□ 1.27
LRRC42-204ENST00000444987 SH3RF3Q8TEJ3 882 aaPredicted RBP22.98■■□□□ 1.27
LRRC42-204ENST00000444987 GCC1Q96CN9 775 aa22.98■■□□□ 1.27
LRRC42-204ENST00000444987 CFHR5Q9BXR6 569 aa22.98■■□□□ 1.27
LRRC42-204ENST00000444987 OSBPL5Q9H0X9 879 aaPredicted RBP22.98■■□□□ 1.27
LRRC42-204ENST00000444987 DHX36Q9H2U1 1008 aaKnown RBP22.98■■□□□ 1.27
LRRC42-204ENST00000444987 ECHDC1Q9NTX5 307 aa22.98■■□□□ 1.27
LRRC42-204ENST00000444987 PAG1Q9NWQ8 432 aa22.98■■□□□ 1.27
LRRC42-204ENST00000444987 CDK5RAP2Q96SN8 1893 aa22.98■■□□□ 1.27
LRRC42-204ENST00000444987 DDTLA6NHG4 134 aaPredicted RBP22.97■■□□□ 1.27
LRRC42-204ENST00000444987 SMARCA5O60264 1052 aaPredicted RBP22.97■■□□□ 1.27
LRRC42-204ENST00000444987 DNAJC2Q99543 621 aaKnown RBP22.97■■□□□ 1.27
LRRC42-204ENST00000444987 SNCAIPQ9Y6H5 919 aa22.97■■□□□ 1.27
LRRC42-204ENST00000444987 NDUFB9Q9Y6M9 179 aa22.97■■□□□ 1.27
LRRC42-204ENST00000444987 TESPA1A2RU30 521 aaPredicted RBP22.96■■□□□ 1.27
LRRC42-204ENST00000444987 GOLIM4O00461 696 aa22.96■■□□□ 1.27
LRRC42-204ENST00000444987 TRPA1O75762 1119 aa22.96■■□□□ 1.27
LRRC42-204ENST00000444987 MKRN3Q13064 507 aaKnown RBP22.96■■□□□ 1.27
LRRC42-204ENST00000444987 BOLA2Q9H3K6 86 aa22.96■■□□□ 1.27
LRRC42-204ENST00000444987 GJA5P36382 358 aa22.95■■□□□ 1.26
LRRC42-204ENST00000444987 GTF2A2P52657 109 aa22.95■■□□□ 1.26
LRRC42-204ENST00000444987 PPATQ06203 517 aa22.95■■□□□ 1.26
LRRC42-204ENST00000444987 NOM1Q5C9Z4 860 aaKnown RBP22.95■■□□□ 1.26
LRRC42-204ENST00000444987 SLC9C2Q5TAH2 1124 aa22.95■■□□□ 1.26
LRRC42-204ENST00000444987 OTUD7BQ6GQQ9 843 aa22.95■■□□□ 1.26
LRRC42-204ENST00000444987 ZKSCAN4Q969J2 545 aaPredicted RBP22.95■■□□□ 1.26
LRRC42-204ENST00000444987 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.95■■□□□ 1.26
LRRC42-204ENST00000444987 BCL11AQ9H165 835 aa22.95■■□□□ 1.26
LRRC42-204ENST00000444987 SUPT16HQ9Y5B9 1047 aaKnown RBP22.95■■□□□ 1.26
LRRC42-204ENST00000444987 TTC41PQ6P2S7 1318 aa22.94■■□□□ 1.26
LRRC42-204ENST00000444987 PHF20L1A8MW92 1017 aa22.94■■□□□ 1.26
LRRC42-204ENST00000444987 ZBTB47Q9UFB7 747 aaPredicted RBP22.94■■□□□ 1.26
LRRC42-204ENST00000444987 FLT1P17948 1338 aa22.93■■□□□ 1.26
LRRC42-204ENST00000444987 PDE6AP16499 860 aa22.93■■□□□ 1.26
LRRC42-204ENST00000444987 INPP5BP32019 993 aa22.93■■□□□ 1.26
LRRC42-204ENST00000444987 PPIL2Q13356 520 aa22.93■■□□□ 1.26
LRRC42-204ENST00000444987 IFNL1Q8IU54 200 aa22.93■■□□□ 1.26
LRRC42-204ENST00000444987 TGFBRAP1Q8WUH2 860 aa22.93■■□□□ 1.26
LRRC42-204ENST00000444987 OTUD5Q96G74 571 aa22.93■■□□□ 1.26
LRRC42-204ENST00000444987 PI4KBQ9UBF8 816 aa22.93■■□□□ 1.26
LRRC42-204ENST00000444987 HERC5Q9UII4 1024 aaKnown RBP22.93■■□□□ 1.26
LRRC42-204ENST00000444987 MYH7P12883 1935 aa22.92■■□□□ 1.26
LRRC42-204ENST00000444987 CTNND1O60716 968 aaKnown RBP22.92■■□□□ 1.26
LRRC42-204ENST00000444987 ZSCAN25Q6NSZ9 544 aa22.92■■□□□ 1.26
LRRC42-204ENST00000444987 MS4A4AQ96JQ5 239 aa22.92■■□□□ 1.26
LRRC42-204ENST00000444987 RWDD1Q9H446 243 aaPredicted RBP22.92■■□□□ 1.26
LRRC42-204ENST00000444987 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.92■■□□□ 1.26
LRRC42-204ENST00000444987 TSKSQ9UJT2 592 aa22.92■■□□□ 1.26
LRRC42-204ENST00000444987 ERC2O15083 957 aa22.91■■□□□ 1.26
LRRC42-204ENST00000444987 DYNLL1P63167 89 aaKnown RBP22.91■■□□□ 1.26
LRRC42-204ENST00000444987 FOXP4Q8IVH2 680 aaPredicted RBP22.91■■□□□ 1.26
LRRC42-204ENST00000444987 SCYL3Q8IZE3 742 aa22.91■■□□□ 1.26
LRRC42-204ENST00000444987 RIOK1Q9BRS2 568 aaKnown RBP22.91■■□□□ 1.26
LRRC42-204ENST00000444987 DOCK1Q14185 1865 aa22.91■■□□□ 1.26
LRRC42-204ENST00000444987 ZNF532Q9HCE3 1301 aa22.9■■□□□ 1.26
LRRC42-204ENST00000444987 MAGEB6P1A0A0J9YX57 407 aa22.9■■□□□ 1.26
LRRC42-204ENST00000444987 TCRBV5S4A2TA0A5A2 114 aa22.9■■□□□ 1.26
LRRC42-204ENST00000444987 CETPP11597 493 aa22.9■■□□□ 1.26
LRRC42-204ENST00000444987 SNAPC2Q13487 334 aa22.9■■□□□ 1.26
LRRC42-204ENST00000444987 METTL16Q86W50 562 aaKnown RBP22.9■■□□□ 1.26
LRRC42-204ENST00000444987 MAPKAPK5Q8IW41 473 aa22.9■■□□□ 1.26
LRRC42-204ENST00000444987 TNS4Q8IZW8 715 aa22.9■■□□□ 1.26
LRRC42-204ENST00000444987 MIGA1Q8NAN2 632 aa22.9■■□□□ 1.26
LRRC42-204ENST00000444987 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.9■■□□□ 1.26
LRRC42-204ENST00000444987 ZCCHC17Q9NP64 241 aaKnown RBP22.9■■□□□ 1.26
LRRC42-204ENST00000444987 MYH1P12882 1939 aa22.89■■□□□ 1.25
LRRC42-204ENST00000444987 ADD2P35612 726 aa22.89■■□□□ 1.25
LRRC42-204ENST00000444987 UBE3CQ15386 1083 aa22.89■■□□□ 1.25
LRRC42-204ENST00000444987 EXOC6Q8TAG9 804 aa22.89■■□□□ 1.25
LRRC42-204ENST00000444987 CNKSR2Q8WXI2 1034 aa22.89■■□□□ 1.25
LRRC42-204ENST00000444987 EDC3Q96F86 508 aaKnown RBP22.89■■□□□ 1.25
LRRC42-204ENST00000444987 PICK1Q9NRD5 415 aa22.89■■□□□ 1.25
LRRC42-204ENST00000444987 IGF2BP3O00425 579 aaKnown RBP eCLIP22.88■■□□□ 1.25
LRRC42-204ENST00000444987 IRF6O14896 467 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms