RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 MYH8P13535 1937 aa13.39□□□□□ -0.27
SF3A1-203ENST00000444440 RBBP6Q7Z6E9 1792 aaKnown RBP13.38□□□□□ -0.27
SF3A1-203ENST00000444440 GPR75-ASB3A0A0A6YYF3 556 aa13.38□□□□□ -0.27
SF3A1-203ENST00000444440 SPDYE5A6NIY4 337 aa13.38□□□□□ -0.27
SF3A1-203ENST00000444440 CYP2E1P05181 493 aaPredicted RBP13.38□□□□□ -0.27
SF3A1-203ENST00000444440 UQCRFS1P1P0C7P4 283 aa13.38□□□□□ -0.27
SF3A1-203ENST00000444440 CRHR2Q13324 411 aa13.38□□□□□ -0.27
SF3A1-203ENST00000444440 NOM1Q5C9Z4 860 aaKnown RBP13.38□□□□□ -0.27
SF3A1-203ENST00000444440 CTU1Q7Z7A3 348 aaKnown RBP13.38□□□□□ -0.27
SF3A1-203ENST00000444440 ADGRA1Q86SQ6 560 aa13.38□□□□□ -0.27
SF3A1-203ENST00000444440 ZNF341Q9BYN7 854 aa13.38□□□□□ -0.27
SF3A1-203ENST00000444440 ZBTB40Q9NUA8 1239 aa13.38□□□□□ -0.27
SF3A1-203ENST00000444440 CSADQ9Y600 493 aa13.38□□□□□ -0.27
SF3A1-203ENST00000444440 BAZ2AQ9UIF9 1905 aaKnown RBP13.38□□□□□ -0.27
SF3A1-203ENST00000444440 CCL15-CCL14A0A0B4J2E2 113 aa13.37□□□□□ -0.27
SF3A1-203ENST00000444440 PHF20L1A8MW92 1017 aa13.37□□□□□ -0.27
SF3A1-203ENST00000444440 IRF6O14896 467 aa13.37□□□□□ -0.27
SF3A1-203ENST00000444440 ZAP70P43403 619 aa13.37□□□□□ -0.27
SF3A1-203ENST00000444440 INHBEP58166 350 aa13.37□□□□□ -0.27
SF3A1-203ENST00000444440 PICALMQ13492 652 aa13.37□□□□□ -0.27
SF3A1-203ENST00000444440 CCL15Q16663 113 aa13.37□□□□□ -0.27
SF3A1-203ENST00000444440 TTC39AQ5SRH9 613 aa13.37□□□□□ -0.27
SF3A1-203ENST00000444440 SPTY2D1Q68D10 685 aaPredicted RBP13.37□□□□□ -0.27
SF3A1-203ENST00000444440 FAM43AQ8N2R8 423 aa13.37□□□□□ -0.27
SF3A1-203ENST00000444440 PIH1D3Q9NQM4 214 aaKnown RBP13.37□□□□□ -0.27
SF3A1-203ENST00000444440 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.37□□□□□ -0.27
SF3A1-203ENST00000444440 DOCK3Q8IZD9 2030 aa13.37□□□□□ -0.27
SF3A1-203ENST00000444440 FKTNO75072 461 aa13.36□□□□□ -0.27
SF3A1-203ENST00000444440 ENTPD3O75355 529 aa13.36□□□□□ -0.27
SF3A1-203ENST00000444440 DCAF15Q66K64 600 aa13.36□□□□□ -0.27
SF3A1-203ENST00000444440 ERO1BQ86YB8 467 aa13.36□□□□□ -0.27
SF3A1-203ENST00000444440 IL1RAPL2Q9NP60 686 aa13.36□□□□□ -0.27
SF3A1-203ENST00000444440 RAI14Q9P0K7 980 aa13.36□□□□□ -0.27
SF3A1-203ENST00000444440 FAM196BA6NMK8 535 aa13.35□□□□□ -0.27
SF3A1-203ENST00000444440 ALDH1A1P00352 501 aa13.35□□□□□ -0.27
SF3A1-203ENST00000444440 PPIL2Q13356 520 aa13.35□□□□□ -0.27
SF3A1-203ENST00000444440 MOGSQ13724 837 aa13.35□□□□□ -0.27
SF3A1-203ENST00000444440 SH3RF3Q8TEJ3 882 aaPredicted RBP13.35□□□□□ -0.27
SF3A1-203ENST00000444440 ZNF512BQ96KM6 892 aaPredicted RBP13.35□□□□□ -0.27
SF3A1-203ENST00000444440 ANTXR1Q9H6X2 564 aa13.35□□□□□ -0.27
SF3A1-203ENST00000444440 DDX19BQ9UMR2 479 aa13.35□□□□□ -0.27
SF3A1-203ENST00000444440 COL2A1P02458 1487 aaPredicted RBP13.35□□□□□ -0.27
SF3A1-203ENST00000444440 BTBD19C9JJ37 291 aa13.34□□□□□ -0.27
SF3A1-203ENST00000444440 GTF2A2P52657 109 aa13.34□□□□□ -0.27
SF3A1-203ENST00000444440 MAP3K10Q02779 954 aa13.34□□□□□ -0.27
SF3A1-203ENST00000444440 CCDC158Q5M9N0 1113 aa13.34□□□□□ -0.27
SF3A1-203ENST00000444440 NOL9Q5SY16 702 aaKnown RBP13.34□□□□□ -0.27
SF3A1-203ENST00000444440 SLF2Q8IX21 1173 aa13.34□□□□□ -0.27
SF3A1-203ENST00000444440 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.34□□□□□ -0.27
SF3A1-203ENST00000444440 RHPN1Q8TCX5 695 aa13.34□□□□□ -0.27
SF3A1-203ENST00000444440 HOOK2Q96ED9 719 aa13.34□□□□□ -0.27
SF3A1-203ENST00000444440 LRP2BPQ9P2M1 347 aa13.34□□□□□ -0.27
SF3A1-203ENST00000444440 HPS5Q9UPZ3 1129 aa13.34□□□□□ -0.27
SF3A1-203ENST00000444440 APBB1O00213 710 aa13.33□□□□□ -0.28
SF3A1-203ENST00000444440 MS4A1P11836 297 aa13.33□□□□□ -0.28
SF3A1-203ENST00000444440 PPATQ06203 517 aa13.33□□□□□ -0.28
SF3A1-203ENST00000444440 RRP1BQ14684 758 aaKnown RBP13.33□□□□□ -0.28
SF3A1-203ENST00000444440 CCDC84Q86UT8 332 aaPredicted RBP13.33□□□□□ -0.28
SF3A1-203ENST00000444440 AACSQ86V21 672 aa13.33□□□□□ -0.28
SF3A1-203ENST00000444440 ZSCAN29Q8IWY8 852 aaPredicted RBP13.33□□□□□ -0.28
SF3A1-203ENST00000444440 CD99L2Q8TCZ2 262 aa13.33□□□□□ -0.28
SF3A1-203ENST00000444440 AATFQ9NY61 560 aaKnown RBP eCLIP13.33□□□□□ -0.28
SF3A1-203ENST00000444440 LDHCP07864 332 aa13.32□□□□□ -0.28
SF3A1-203ENST00000444440 SOX10P56693 466 aa13.32□□□□□ -0.28
SF3A1-203ENST00000444440 DYNLL1P63167 89 aaKnown RBP13.32□□□□□ -0.28
SF3A1-203ENST00000444440 GSTO1P78417 241 aa13.32□□□□□ -0.28
SF3A1-203ENST00000444440 TAF1CQ15572 869 aaPredicted RBP13.32□□□□□ -0.28
SF3A1-203ENST00000444440 NAA16Q6N069 864 aaPredicted RBP13.32□□□□□ -0.28
SF3A1-203ENST00000444440 OTOP1Q7RTM1 612 aa13.32□□□□□ -0.28
SF3A1-203ENST00000444440 RPAP2Q8IXW5 612 aaPredicted RBP13.32□□□□□ -0.28
SF3A1-203ENST00000444440 TEX11Q8IYF3 940 aa13.32□□□□□ -0.28
SF3A1-203ENST00000444440 OSBPL5Q9H0X9 879 aaPredicted RBP13.32□□□□□ -0.28
SF3A1-203ENST00000444440 KCNH4Q9UQ05 1017 aa13.32□□□□□ -0.28
SF3A1-203ENST00000444440 NPM3O75607 178 aaKnown RBP13.31□□□□□ -0.28
SF3A1-203ENST00000444440 CETPP11597 493 aa13.31□□□□□ -0.28
SF3A1-203ENST00000444440 RGS19P49795 217 aa13.31□□□□□ -0.28
SF3A1-203ENST00000444440 SNAPC2Q13487 334 aa13.31□□□□□ -0.28
SF3A1-203ENST00000444440 OTUD7BQ6GQQ9 843 aa13.31□□□□□ -0.28
SF3A1-203ENST00000444440 SCYL3Q8IZE3 742 aa13.31□□□□□ -0.28
SF3A1-203ENST00000444440 TRIM17Q9Y577 477 aa13.31□□□□□ -0.28
SF3A1-203ENST00000444440 ADGRA2Q96PE1 1338 aa13.31□□□□□ -0.28
SF3A1-203ENST00000444440 PLXNB2O15031 1838 aa13.3□□□□□ -0.28
SF3A1-203ENST00000444440 PTPRAP18433 802 aa13.3□□□□□ -0.28
SF3A1-203ENST00000444440 PPP4CP60510 307 aa13.3□□□□□ -0.28
SF3A1-203ENST00000444440 SP3Q02447 781 aa13.3□□□□□ -0.28
SF3A1-203ENST00000444440 PDE3AQ14432 1141 aa13.3□□□□□ -0.28
SF3A1-203ENST00000444440 SHROOM1Q2M3G4 852 aaPredicted RBP13.3□□□□□ -0.28
SF3A1-203ENST00000444440 GPAT2Q6NUI2 795 aa13.3□□□□□ -0.28
SF3A1-203ENST00000444440 FBXO46Q6PJ61 603 aaPredicted RBP13.3□□□□□ -0.28
SF3A1-203ENST00000444440 ERC1Q8IUD2 1116 aa13.3□□□□□ -0.28
SF3A1-203ENST00000444440 EDC3Q96F86 508 aaKnown RBP13.3□□□□□ -0.28
SF3A1-203ENST00000444440 ARHGAP39Q9C0H5 1083 aa13.3□□□□□ -0.28
SF3A1-203ENST00000444440 DNAJC18Q9H819 358 aa13.3□□□□□ -0.28
SF3A1-203ENST00000444440 FLT1P17948 1338 aa13.3□□□□□ -0.28
SF3A1-203ENST00000444440 IDH1O75874 414 aaKnown RBP13.29□□□□□ -0.28
SF3A1-203ENST00000444440 CYP7A1P22680 504 aa13.29□□□□□ -0.28
SF3A1-203ENST00000444440 CTGFP29279 349 aa13.29□□□□□ -0.28
SF3A1-203ENST00000444440 JAG1P78504 1218 aa13.29□□□□□ -0.28
SF3A1-203ENST00000444440 SLC4A8Q2Y0W8 1093 aa13.29□□□□□ -0.28
SF3A1-203ENST00000444440 MAPKAPK5Q8IW41 473 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms