RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 RIC3Q7Z5B4 369 aa5.65□□□□□ -1.5
HERC1-201ENST00000443617 TRIM22Q8IYM9 498 aa5.65□□□□□ -1.5
HERC1-201ENST00000443617 RASSF8Q8NHQ8 419 aa5.65□□□□□ -1.5
HERC1-201ENST00000443617 BABAM1Q9NWV8 329 aa5.65□□□□□ -1.5
HERC1-201ENST00000443617 SSBP05455 408 aaKnown RBP eCLIP5.65□□□□□ -1.5
HERC1-201ENST00000443617 CCT8L2Q96SF2 557 aa5.65□□□□□ -1.5
HERC1-201ENST00000443617 USO1O60763 962 aaKnown RBP5.65□□□□□ -1.51
HERC1-201ENST00000443617 PLCB4Q15147 1175 aa5.65□□□□□ -1.51
HERC1-201ENST00000443617 TMX4Q9H1E5 349 aaPredicted RBP5.65□□□□□ -1.51
HERC1-201ENST00000443617 CEP131Q9UPN4 1083 aa5.65□□□□□ -1.51
HERC1-201ENST00000443617 EPN1Q9Y6I3 576 aaPredicted RBP5.65□□□□□ -1.51
HERC1-201ENST00000443617 IRX2Q9BZI1 471 aaPredicted RBP5.65□□□□□ -1.51
HERC1-201ENST00000443617 TSGA10Q9BZW7 698 aa5.65□□□□□ -1.51
HERC1-201ENST00000443617 NBPF7P0C2Y1 421 aaPredicted RBP5.65□□□□□ -1.51
HERC1-201ENST00000443617 PAFAH1B1P43034 410 aa5.65□□□□□ -1.51
HERC1-201ENST00000443617 NBPF9Q3BBW0 867 aa5.65□□□□□ -1.51
HERC1-201ENST00000443617 PREPLQ4J6C6 727 aaPredicted RBP5.65□□□□□ -1.51
HERC1-201ENST00000443617 MIEF2Q96C03 454 aa5.65□□□□□ -1.51
HERC1-201ENST00000443617 CLIC6Q96NY7 704 aa5.65□□□□□ -1.51
HERC1-201ENST00000443617 POLR2DO15514 142 aaKnown RBP5.65□□□□□ -1.51
HERC1-201ENST00000443617 TRIM14Q14142 442 aa5.65□□□□□ -1.51
HERC1-201ENST00000443617 HDAC6Q9UBN7 1215 aa5.65□□□□□ -1.51
HERC1-201ENST00000443617 DRP2Q13474 957 aa5.65□□□□□ -1.51
HERC1-201ENST00000443617 AIDAQ96BJ3 306 aa5.65□□□□□ -1.51
HERC1-201ENST00000443617 MFAP3LO75121 409 aa5.65□□□□□ -1.51
HERC1-201ENST00000443617 RRAGBQ5VZM2 374 aa5.65□□□□□ -1.51
HERC1-201ENST00000443617 DPF2Q92785 391 aa5.65□□□□□ -1.51
HERC1-201ENST00000443617 CD248Q9HCU0 757 aa5.65□□□□□ -1.51
HERC1-201ENST00000443617 DNAJC5BQ9UF47 199 aa5.65□□□□□ -1.51
HERC1-201ENST00000443617 CDHR2Q9BYE9 1310 aa5.64□□□□□ -1.51
HERC1-201ENST00000443617 TC2NQ8N9U0 490 aa5.64□□□□□ -1.51
HERC1-201ENST00000443617 HINFPQ9BQA5 517 aa5.64□□□□□ -1.51
HERC1-201ENST00000443617 FSBPO95073 299 aa5.64□□□□□ -1.51
HERC1-201ENST00000443617 TTF1Q15361 905 aaPredicted RBP5.64□□□□□ -1.51
HERC1-201ENST00000443617 AP1ARQ63HQ0 302 aa5.64□□□□□ -1.51
HERC1-201ENST00000443617 NAIF1Q69YI7 327 aaPredicted RBP5.64□□□□□ -1.51
HERC1-201ENST00000443617 TAF4BQ92750 862 aa5.64□□□□□ -1.51
HERC1-201ENST00000443617 A1CFQ9NQ94 594 aaKnown RBP5.64□□□□□ -1.51
HERC1-201ENST00000443617 CCT6AP40227 531 aaKnown RBP5.64□□□□□ -1.51
HERC1-201ENST00000443617 RASGRP2Q7LDG7 609 aa5.64□□□□□ -1.51
HERC1-201ENST00000443617 CARD10Q9BWT7 1032 aa5.64□□□□□ -1.51
HERC1-201ENST00000443617 TRIM6Q9C030 488 aaPredicted RBP5.64□□□□□ -1.51
HERC1-201ENST00000443617 MTF1Q14872 753 aa5.64□□□□□ -1.51
HERC1-201ENST00000443617 NR1I3Q14994 352 aa5.64□□□□□ -1.51
HERC1-201ENST00000443617 KRT40Q6A162 431 aa5.64□□□□□ -1.51
HERC1-201ENST00000443617 EMBQ6PCB8 327 aa5.64□□□□□ -1.51
HERC1-201ENST00000443617 ILDR1Q86SU0 546 aaPredicted RBP5.64□□□□□ -1.51
HERC1-201ENST00000443617 SWAP70Q9UH65 585 aa5.64□□□□□ -1.51
HERC1-201ENST00000443617 PNMA8AQ86V59 439 aaPredicted RBP5.64□□□□□ -1.51
HERC1-201ENST00000443617 TXNDC2Q86VQ3 553 aa5.64□□□□□ -1.51
HERC1-201ENST00000443617 ARMC2Q8NEN0 867 aa5.64□□□□□ -1.51
HERC1-201ENST00000443617 SPATS2LQ9NUQ6 558 aaKnown RBP5.64□□□□□ -1.51
HERC1-201ENST00000443617 SLC12A7Q9Y666 1083 aa5.64□□□□□ -1.51
HERC1-201ENST00000443617 MACROD2A1Z1Q3 448 aa5.64□□□□□ -1.51
HERC1-201ENST00000443617 PRC1O43663 620 aa5.64□□□□□ -1.51
HERC1-201ENST00000443617 SHOX2O60902 331 aaPredicted RBP5.64□□□□□ -1.51
HERC1-201ENST00000443617 HAND2P61296 217 aa5.64□□□□□ -1.51
HERC1-201ENST00000443617 TBX2Q13207 712 aaPredicted RBP5.64□□□□□ -1.51
HERC1-201ENST00000443617 CRYMQ14894 314 aa5.64□□□□□ -1.51
HERC1-201ENST00000443617 PRPF38AQ8NAV1 312 aaKnown RBP5.64□□□□□ -1.51
HERC1-201ENST00000443617 SMARCC2Q8TAQ2 1214 aa5.64□□□□□ -1.51
HERC1-201ENST00000443617 GRM8O00222 908 aa5.64□□□□□ -1.51
HERC1-201ENST00000443617 RNF113AO15541 343 aaKnown RBP5.64□□□□□ -1.51
HERC1-201ENST00000443617 MEFVO15553 781 aaPredicted RBP5.64□□□□□ -1.51
HERC1-201ENST00000443617 SRGAP2O75044 1071 aa5.64□□□□□ -1.51
HERC1-201ENST00000443617 KRT9P35527 623 aa5.64□□□□□ -1.51
HERC1-201ENST00000443617 ADCY9O60503 1353 aa5.64□□□□□ -1.51
HERC1-201ENST00000443617 SH3GL3Q99963 347 aa5.64□□□□□ -1.51
HERC1-201ENST00000443617 RAPGEF6Q8TEU7 1601 aa5.64□□□□□ -1.51
HERC1-201ENST00000443617 E9PCH4 1651 aa5.64□□□□□ -1.51
HERC1-201ENST00000443617 KIF9Q9HAQ2 790 aa5.64□□□□□ -1.51
HERC1-201ENST00000443617 CTNND2Q9UQB3 1225 aa5.64□□□□□ -1.51
HERC1-201ENST00000443617 AFMP43652 599 aa5.64□□□□□ -1.51
HERC1-201ENST00000443617 HAUS7Q99871 368 aa5.64□□□□□ -1.51
HERC1-201ENST00000443617 APBA1Q02410 837 aa5.64□□□□□ -1.51
HERC1-201ENST00000443617 PLEKHO1Q53GL0 409 aaPredicted RBP5.64□□□□□ -1.51
HERC1-201ENST00000443617 NCAPH2Q6IBW4 605 aa5.64□□□□□ -1.51
HERC1-201ENST00000443617 DBF4Q9UBU7 674 aaPredicted RBP5.64□□□□□ -1.51
HERC1-201ENST00000443617 PPP1R12BO60237 982 aaPredicted RBP5.64□□□□□ -1.51
HERC1-201ENST00000443617 EXOSC10Q01780 885 aaKnown RBP5.64□□□□□ -1.51
HERC1-201ENST00000443617 IFFO1Q0D2I5 559 aa5.64□□□□□ -1.51
HERC1-201ENST00000443617 C21orf2O43822 256 aa5.63□□□□□ -1.51
HERC1-201ENST00000443617 PAK2Q13177 524 aa5.63□□□□□ -1.51
HERC1-201ENST00000443617 CPLX4Q7Z7G2 160 aa5.63□□□□□ -1.51
HERC1-201ENST00000443617 KAT2BQ92831 832 aa5.63□□□□□ -1.51
HERC1-201ENST00000443617 PDCLQ13371 301 aa5.63□□□□□ -1.51
HERC1-201ENST00000443617 NBPF20Q3BBV1 942 aa5.63□□□□□ -1.51
HERC1-201ENST00000443617 FKBP15Q5T1M5 1219 aa5.63□□□□□ -1.51
HERC1-201ENST00000443617 SLC40A1Q9NP59 571 aa5.63□□□□□ -1.51
HERC1-201ENST00000443617 A0A1B0GTH6 734 aa5.63□□□□□ -1.51
HERC1-201ENST00000443617 BTBD11A6QL63 1104 aa5.63□□□□□ -1.51
HERC1-201ENST00000443617 KRT86O43790 486 aa5.63□□□□□ -1.51
HERC1-201ENST00000443617 LSP1P33241 339 aa5.63□□□□□ -1.51
HERC1-201ENST00000443617 SLC9C2Q5TAH2 1124 aa5.63□□□□□ -1.51
HERC1-201ENST00000443617 FAM184BQ9ULE4 1060 aa5.63□□□□□ -1.51
HERC1-201ENST00000443617 CYLC1P35663 651 aaPredicted RBP5.63□□□□□ -1.51
HERC1-201ENST00000443617 ZNF827Q17R98 1081 aa5.63□□□□□ -1.51
HERC1-201ENST00000443617 TRIML1Q8N9V2 468 aa5.63□□□□□ -1.51
HERC1-201ENST00000443617 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.63□□□□□ -1.51
HERC1-201ENST00000443617 TAB2Q9NYJ8 693 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms