RNA–Protein interactions for RNA: ENST00000443528.5

ACTB-206, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 569 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-206ENST00000443528 MIGA2Q7L4E1 593 aa19.09■□□□□ 0.65
ACTB-206ENST00000443528 TEX11Q8IYF3 940 aa19.09■□□□□ 0.65
ACTB-206ENST00000443528 ANKRD13AQ8IZ07 590 aa19.09■□□□□ 0.65
ACTB-206ENST00000443528 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.09■□□□□ 0.65
ACTB-206ENST00000443528 HOOK2Q96ED9 719 aa19.09■□□□□ 0.65
ACTB-206ENST00000443528 GPATCH3Q96I76 525 aa19.09■□□□□ 0.65
ACTB-206ENST00000443528 ATRNL1Q5VV63 1379 aa19.08■□□□□ 0.65
ACTB-206ENST00000443528 TCRBV5S4A2TA0A5A2 114 aa19.08■□□□□ 0.64
ACTB-206ENST00000443528 PLCG2P16885 1265 aa19.08■□□□□ 0.64
ACTB-206ENST00000443528 MAP2K1Q02750 393 aaPredicted RBP19.08■□□□□ 0.64
ACTB-206ENST00000443528 MIGA1Q8NAN2 632 aa19.08■□□□□ 0.64
ACTB-206ENST00000443528 SLC10A4Q96EP9 437 aa19.08■□□□□ 0.64
ACTB-206ENST00000443528 TTC41PQ6P2S7 1318 aa19.07■□□□□ 0.64
ACTB-206ENST00000443528 MAP3K9P80192 1104 aa19.07■□□□□ 0.64
ACTB-206ENST00000443528 DCAF15Q66K64 600 aa19.07■□□□□ 0.64
ACTB-206ENST00000443528 PI4K2BQ8TCG2 481 aa19.07■□□□□ 0.64
ACTB-206ENST00000443528 CSRNP1Q96S65 589 aa19.07■□□□□ 0.64
ACTB-206ENST00000443528 OSBPL5Q9H0X9 879 aaPredicted RBP19.07■□□□□ 0.64
ACTB-206ENST00000443528 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.07■□□□□ 0.64
ACTB-206ENST00000443528 ZNF532Q9HCE3 1301 aa19.06■□□□□ 0.64
ACTB-206ENST00000443528 CHGBP05060 677 aa19.06■□□□□ 0.64
ACTB-206ENST00000443528 SLURP2P0DP57 97 aa19.06■□□□□ 0.64
ACTB-206ENST00000443528 MX1P20591 662 aa19.06■□□□□ 0.64
ACTB-206ENST00000443528 VGLL4Q14135 290 aa19.06■□□□□ 0.64
ACTB-206ENST00000443528 SLFNL1Q499Z3 407 aa19.06■□□□□ 0.64
ACTB-206ENST00000443528 SPRYD7Q5W111 196 aa19.06■□□□□ 0.64
ACTB-206ENST00000443528 ZSCAN29Q8IWY8 852 aaPredicted RBP19.06■□□□□ 0.64
ACTB-206ENST00000443528 TGFBRAP1Q8WUH2 860 aa19.06■□□□□ 0.64
ACTB-206ENST00000443528 RIOK1Q9BRS2 568 aaKnown RBP19.06■□□□□ 0.64
ACTB-206ENST00000443528 ZNF341Q9BYN7 854 aa19.06■□□□□ 0.64
ACTB-206ENST00000443528 ZBTB47Q9UFB7 747 aaPredicted RBP19.06■□□□□ 0.64
ACTB-206ENST00000443528 ZNF112Q9UJU3 913 aa19.06■□□□□ 0.64
ACTB-206ENST00000443528 OTOFQ9HC10 1997 aa19.06■□□□□ 0.64
ACTB-206ENST00000443528 FOXN1O15353 648 aa19.05■□□□□ 0.64
ACTB-206ENST00000443528 ADD2P35612 726 aa19.05■□□□□ 0.64
ACTB-206ENST00000443528 GJA5P36382 358 aa19.05■□□□□ 0.64
ACTB-206ENST00000443528 MAP3K10Q02779 954 aa19.05■□□□□ 0.64
ACTB-206ENST00000443528 MKRN3Q13064 507 aaKnown RBP19.05■□□□□ 0.64
ACTB-206ENST00000443528 B4GALNT3Q6L9W6 998 aa19.05■□□□□ 0.64
ACTB-206ENST00000443528 WNK4Q96J92 1243 aa19.05■□□□□ 0.64
ACTB-206ENST00000443528 WRNIP1Q96S55 665 aa19.05■□□□□ 0.64
ACTB-206ENST00000443528 ELP3Q9H9T3 547 aa19.05■□□□□ 0.64
ACTB-206ENST00000443528 FLT1P17948 1338 aa19.04■□□□□ 0.64
ACTB-206ENST00000443528 COL2A1P02458 1487 aaPredicted RBP19.04■□□□□ 0.64
ACTB-206ENST00000443528 INPP5BP32019 993 aa19.04■□□□□ 0.64
ACTB-206ENST00000443528 CERS3Q8IU89 383 aa19.04■□□□□ 0.64
ACTB-206ENST00000443528 MAPKAPK5Q8IW41 473 aa19.04■□□□□ 0.64
ACTB-206ENST00000443528 ZKSCAN4Q969J2 545 aaPredicted RBP19.04■□□□□ 0.64
ACTB-206ENST00000443528 LNPKQ9C0E8 428 aa19.04■□□□□ 0.64
ACTB-206ENST00000443528 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.04■□□□□ 0.648e-19■□□□□ 10.2
ACTB-206ENST00000443528 MAGEB6P1A0A0J9YX57 407 aa19.03■□□□□ 0.64
ACTB-206ENST00000443528 ERC2O15083 957 aa19.03■□□□□ 0.64
ACTB-206ENST00000443528 GLRX3O76003 335 aaKnown RBP19.03■□□□□ 0.64
ACTB-206ENST00000443528 NUCB1Q02818 461 aa19.03■□□□□ 0.64
ACTB-206ENST00000443528 KBTBD3Q8NAB2 608 aa19.03■□□□□ 0.64
ACTB-206ENST00000443528 CNKSR2Q8WXI2 1034 aa19.03■□□□□ 0.64
ACTB-206ENST00000443528 STAP2Q9UGK3 403 aa19.03■□□□□ 0.64
ACTB-206ENST00000443528 SNCAIPQ9Y6H5 919 aa19.03■□□□□ 0.64
ACTB-206ENST00000443528 PHF20L1A8MW92 1017 aa19.02■□□□□ 0.64
ACTB-206ENST00000443528 ZBTB48P10074 688 aaPredicted RBP19.02■□□□□ 0.64
ACTB-206ENST00000443528 PDE1AP54750 535 aa19.02■□□□□ 0.64
ACTB-206ENST00000443528 UBE3CQ15386 1083 aa19.02■□□□□ 0.64
ACTB-206ENST00000443528 CHD1LQ86WJ1 897 aa19.02■□□□□ 0.64
ACTB-206ENST00000443528 AIDAQ96BJ3 306 aa19.02■□□□□ 0.64
ACTB-206ENST00000443528 OPTNQ96CV9 577 aa19.02■□□□□ 0.64
ACTB-206ENST00000443528 CSADQ9Y600 493 aa19.02■□□□□ 0.64
ACTB-206ENST00000443528 TBC1D12O60347 775 aa19.01■□□□□ 0.63
ACTB-206ENST00000443528 REM2Q8IYK8 340 aaPredicted RBP19.01■□□□□ 0.63
ACTB-206ENST00000443528 LCORLQ8N3X6 602 aa19.01■□□□□ 0.63
ACTB-206ENST00000443528 BEGAINQ9BUH8 593 aa19.01■□□□□ 0.63
ACTB-206ENST00000443528 DHX36Q9H2U1 1008 aaKnown RBP19.01■□□□□ 0.63
ACTB-206ENST00000443528 AK9Q5TCS8 1911 aa19.01■□□□□ 0.63
ACTB-206ENST00000443528 CDK5RAP2Q96SN8 1893 aa19.01■□□□□ 0.63
ACTB-206ENST00000443528 FOCADQ5VW36 1801 aa19■□□□□ 0.63
ACTB-206ENST00000443528 FAM196BA6NMK8 535 aa19■□□□□ 0.63
ACTB-206ENST00000443528 USP5P45974 858 aa19■□□□□ 0.63
ACTB-206ENST00000443528 TM4SF4P48230 202 aa19■□□□□ 0.63
ACTB-206ENST00000443528 ZSCAN25Q6NSZ9 544 aa19■□□□□ 0.63
ACTB-206ENST00000443528 SAP30BPQ9UHR5 308 aaKnown RBP19■□□□□ 0.63
ACTB-206ENST00000443528 PALD1Q9ULE6 856 aa19■□□□□ 0.63
ACTB-206ENST00000443528 SPDYE5A6NIY4 337 aa18.99■□□□□ 0.63
ACTB-206ENST00000443528 HSPA8P11142 646 aaKnown RBP18.99■□□□□ 0.63
ACTB-206ENST00000443528 NOL9Q5SY16 702 aaKnown RBP18.99■□□□□ 0.63
ACTB-206ENST00000443528 ERO1BQ86YB8 467 aa18.99■□□□□ 0.63
ACTB-206ENST00000443528 PUS7LQ9H0K6 701 aaKnown RBP18.99■□□□□ 0.63
ACTB-206ENST00000443528 ARMT1Q9H993 441 aa18.99■□□□□ 0.63
ACTB-206ENST00000443528 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.99■□□□□ 0.632e-7■■□□□ 13.5
ACTB-206ENST00000443528 RNF186Q9NXI6 227 aa18.99■□□□□ 0.63
ACTB-206ENST00000443528 PI4KBQ9UBF8 816 aa18.99■□□□□ 0.63
ACTB-206ENST00000443528 MANSC4A6NHS7 340 aaPredicted RBP18.98■□□□□ 0.63
ACTB-206ENST00000443528 MBD4O95243 580 aa18.98■□□□□ 0.63
ACTB-206ENST00000443528 CTCFP49711 727 aaPredicted RBP18.98■□□□□ 0.63
ACTB-206ENST00000443528 METTL16Q86W50 562 aaKnown RBP18.98■□□□□ 0.63
ACTB-206ENST00000443528 OTUD5Q96G74 571 aa18.98■□□□□ 0.63
ACTB-206ENST00000443528 MS4A4AQ96JQ5 239 aa18.98■□□□□ 0.63
ACTB-206ENST00000443528 CRNKL1Q9BZJ0 848 aaKnown RBP18.98■□□□□ 0.63
ACTB-206ENST00000443528 TSKSQ9UJT2 592 aa18.98■□□□□ 0.63
ACTB-206ENST00000443528 SIPA1L1O43166 1804 aa18.97■□□□□ 0.63
ACTB-206ENST00000443528 RNF113AO15541 343 aaKnown RBP18.97■□□□□ 0.63
ACTB-206ENST00000443528 CA12O43570 354 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms