RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 ARMT1Q9H993 441 aa19.36■□□□□ 0.69
USP39-205ENST00000442708 GBA2Q9HCG7 927 aaPredicted RBP19.36■□□□□ 0.69
USP39-205ENST00000442708 SIPA1L1O43166 1804 aa19.36■□□□□ 0.69
USP39-205ENST00000442708 DDX60LQ5H9U9 1706 aaKnown RBP19.36■□□□□ 0.69
USP39-205ENST00000442708 MYH1P12882 1939 aa19.35■□□□□ 0.69
USP39-205ENST00000442708 TRIM6-TRIM34B2RNG4 842 aa19.35■□□□□ 0.69
USP39-205ENST00000442708 NPM3O75607 178 aaKnown RBP19.35■□□□□ 0.69
USP39-205ENST00000442708 MBD4O95243 580 aa19.35■□□□□ 0.69
USP39-205ENST00000442708 SLURP2P0DP57 97 aa19.35■□□□□ 0.69
USP39-205ENST00000442708 PRKG1Q13976 671 aa19.35■□□□□ 0.69
USP39-205ENST00000442708 MAPKAPK5Q8IW41 473 aa19.35■□□□□ 0.69
USP39-205ENST00000442708 SEC62Q99442 399 aaKnown RBP19.35■□□□□ 0.69
USP39-205ENST00000442708 OSBPL5Q9H0X9 879 aaPredicted RBP19.35■□□□□ 0.69
USP39-205ENST00000442708 OTOFQ9HC10 1997 aa19.35■□□□□ 0.69
USP39-205ENST00000442708 FLT1P17948 1338 aa19.34■□□□□ 0.69
USP39-205ENST00000442708 M0R2C6 588 aa19.34■□□□□ 0.69
USP39-205ENST00000442708 ZFYP08048 801 aaPredicted RBP19.34■□□□□ 0.69
USP39-205ENST00000442708 COL13A1Q5TAT6 717 aaPredicted RBP19.34■□□□□ 0.69
USP39-205ENST00000442708 SAPCD2Q86UD0 394 aa19.34■□□□□ 0.69
USP39-205ENST00000442708 APPBP2Q92624 585 aa19.34■□□□□ 0.69
USP39-205ENST00000442708 TLL2Q9Y6L7 1015 aa19.34■□□□□ 0.69
USP39-205ENST00000442708 NAV1Q8NEY1 1877 aa19.34■□□□□ 0.69
USP39-205ENST00000442708 ATRNL1Q5VV63 1379 aa19.33■□□□□ 0.69
USP39-205ENST00000442708 PRKAB2O43741 272 aa19.33■□□□□ 0.68
USP39-205ENST00000442708 SUPT20HL1Q3ZLR7 823 aa19.33■□□□□ 0.68
USP39-205ENST00000442708 ZMYM1Q5SVZ6 1142 aa19.33■□□□□ 0.68
USP39-205ENST00000442708 C2orf69Q8N8R5 385 aa19.33■□□□□ 0.68
USP39-205ENST00000442708 MKRN1Q9UHC7 482 aaKnown RBP19.33■□□□□ 0.68
USP39-205ENST00000442708 ABT1Q9ULW3 272 aaKnown RBP19.33■□□□□ 0.68
USP39-205ENST00000442708 BAZ2AQ9UIF9 1905 aaKnown RBP19.33■□□□□ 0.68
USP39-205ENST00000442708 UBE2Q2LH0YL09 131 aa19.32■□□□□ 0.68
USP39-205ENST00000442708 USP2O75604 605 aaPredicted RBP19.32■□□□□ 0.68
USP39-205ENST00000442708 SDSP20132 328 aa19.32■□□□□ 0.68
USP39-205ENST00000442708 NF2P35240 595 aa19.32■□□□□ 0.68
USP39-205ENST00000442708 SDR42E1Q8WUS8 393 aa19.32■□□□□ 0.68
USP39-205ENST00000442708 STRBPQ96SI9 672 aaKnown RBP19.32■□□□□ 0.68
USP39-205ENST00000442708 SAP30BPQ9UHR5 308 aaKnown RBP19.32■□□□□ 0.68
USP39-205ENST00000442708 COL2A1P02458 1487 aaPredicted RBP19.32■□□□□ 0.68
USP39-205ENST00000442708 USP5P45974 858 aa19.31■□□□□ 0.68
USP39-205ENST00000442708 MIGA2Q7L4E1 593 aa19.31■□□□□ 0.68
USP39-205ENST00000442708 CERS3Q8IU89 383 aa19.31■□□□□ 0.68
USP39-205ENST00000442708 AIDAQ96BJ3 306 aa19.31■□□□□ 0.68
USP39-205ENST00000442708 FAM227BQ96M60 508 aa19.31■□□□□ 0.68
USP39-205ENST00000442708 ANGEL1Q9UNK9 670 aaKnown RBP19.31■□□□□ 0.68
USP39-205ENST00000442708 HUNKP57058 714 aa19.3■□□□□ 0.68
USP39-205ENST00000442708 TTLL12Q14166 644 aaPredicted RBP19.3■□□□□ 0.68
USP39-205ENST00000442708 CCDC129Q6ZRS4 1044 aa19.3■□□□□ 0.68
USP39-205ENST00000442708 ZSCAN29Q8IWY8 852 aaPredicted RBP19.3■□□□□ 0.68
USP39-205ENST00000442708 CSRNP1Q96S65 589 aa19.3■□□□□ 0.68
USP39-205ENST00000442708 CRNKL1Q9BZJ0 848 aaKnown RBP19.3■□□□□ 0.68
USP39-205ENST00000442708 PALD1Q9ULE6 856 aa19.3■□□□□ 0.68
USP39-205ENST00000442708 A0A0D9SFI3 127 aa19.29■□□□□ 0.68
USP39-205ENST00000442708 RASSF10A6NK89 507 aa19.29■□□□□ 0.68
USP39-205ENST00000442708 FKBP1BP68106 108 aa19.29■□□□□ 0.68
USP39-205ENST00000442708 EVX2Q03828 476 aa19.29■□□□□ 0.68
USP39-205ENST00000442708 NMIQ13287 307 aaPredicted RBP19.29■□□□□ 0.68
USP39-205ENST00000442708 MAP3K11Q16584 847 aa19.29■□□□□ 0.68
USP39-205ENST00000442708 SLC4A8Q2Y0W8 1093 aa19.29■□□□□ 0.68
USP39-205ENST00000442708 LRRFIP1Q32MZ4 808 aaKnown RBP19.29■□□□□ 0.68
USP39-205ENST00000442708 LDLRAD1Q5T700 205 aa19.29■□□□□ 0.68
USP39-205ENST00000442708 DCP1AQ9NPI6 582 aaPredicted RBP19.29■□□□□ 0.68
USP39-205ENST00000442708 FAM196BA6NMK8 535 aa19.28■□□□□ 0.68
USP39-205ENST00000442708 GPAA1O43292 621 aa19.28■□□□□ 0.68
USP39-205ENST00000442708 ARMC9Q7Z3E5 817 aa19.28■□□□□ 0.68
USP39-205ENST00000442708 CLMNQ96JQ2 1002 aa19.28■□□□□ 0.68
USP39-205ENST00000442708 SLC4A4Q9Y6R1 1079 aa19.28■□□□□ 0.68
USP39-205ENST00000442708 GSG1L2A8MUP6 293 aa19.27■□□□□ 0.68
USP39-205ENST00000442708 FOXP2O15409 715 aa19.27■□□□□ 0.68
USP39-205ENST00000442708 PPP1R12BO60237 982 aaPredicted RBP19.27■□□□□ 0.68
USP39-205ENST00000442708 MAP3K10Q02779 954 aa19.27■□□□□ 0.68
USP39-205ENST00000442708 DEFB115Q30KQ5 88 aa19.27■□□□□ 0.68
USP39-205ENST00000442708 TICAM2Q86XR7 235 aa19.27■□□□□ 0.68
USP39-205ENST00000442708 JMYQ8N9B5 988 aa19.27■□□□□ 0.68
USP39-205ENST00000442708 KLRG1Q96E93 195 aa19.27■□□□□ 0.68
USP39-205ENST00000442708 SMIM22K7EJ46 135 aa19.26■□□□□ 0.67
USP39-205ENST00000442708 CYP2D6P10635 497 aa19.26■□□□□ 0.67
USP39-205ENST00000442708 CYP4F22Q6NT55 531 aa19.26■□□□□ 0.67
USP39-205ENST00000442708 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.26■□□□□ 0.67
USP39-205ENST00000442708 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.26■□□□□ 0.67
USP39-205ENST00000442708 HHIPL1Q96JK4 782 aa19.26■□□□□ 0.67
USP39-205ENST00000442708 EPB41L4AQ9HCS5 686 aaPredicted RBP19.26■□□□□ 0.67
USP39-205ENST00000442708 HELLSQ9NRZ9 838 aa19.26■□□□□ 0.67
USP39-205ENST00000442708 PHF20L1A8MW92 1017 aa19.25■□□□□ 0.67
USP39-205ENST00000442708 CAPN15O75808 1086 aa19.25■□□□□ 0.67
USP39-205ENST00000442708 INPP5BP32019 993 aa19.25■□□□□ 0.67
USP39-205ENST00000442708 IREB2P48200 963 aaKnown RBP19.25■□□□□ 0.67
USP39-205ENST00000442708 PLCD1P51178 756 aa19.25■□□□□ 0.67
USP39-205ENST00000442708 DCAF15Q66K64 600 aa19.25■□□□□ 0.67
USP39-205ENST00000442708 RGMBQ6NW40 437 aa19.25■□□□□ 0.67
USP39-205ENST00000442708 ZNF589Q86UQ0 364 aaPredicted RBP19.25■□□□□ 0.67
USP39-205ENST00000442708 HOOK2Q96ED9 719 aa19.25■□□□□ 0.67
USP39-205ENST00000442708 ZNF341Q9BYN7 854 aa19.25■□□□□ 0.67
USP39-205ENST00000442708 IL25Q9H293 177 aa19.25■□□□□ 0.67
USP39-205ENST00000442708 DHX36Q9H2U1 1008 aaKnown RBP19.25■□□□□ 0.67
USP39-205ENST00000442708 DNAJC18Q9H819 358 aa19.25■□□□□ 0.67
USP39-205ENST00000442708 ATP8A2Q9NTI2 1148 aa19.25■□□□□ 0.67
USP39-205ENST00000442708 ZNF112Q9UJU3 913 aa19.25■□□□□ 0.67
USP39-205ENST00000442708 CYP2D7A0A087X1C5 515 aa19.24■□□□□ 0.67
USP39-205ENST00000442708 FAM155AB1AL88 458 aaPredicted RBP19.24■□□□□ 0.67
USP39-205ENST00000442708 VEGFBP49765 207 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms