RNA–Protein interactions for RNA: ENST00000441756.1

MCF2L-217, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-217ENST00000441756 HAND2P61296 217 aa18.85■□□□□ 0.61
MCF2L-217ENST00000441756 PPARAQ07869 468 aa18.85■□□□□ 0.61
MCF2L-217ENST00000441756 SNX21Q969T3 373 aa18.85■□□□□ 0.61
MCF2L-217ENST00000441756 ZSWIM6Q9HCJ5 1215 aa18.85■□□□□ 0.61
MCF2L-217ENST00000441756 ECM29Q5VYK3 1845 aa18.85■□□□□ 0.61
MCF2L-217ENST00000441756 ZNF541Q9H0D2 1346 aa18.84■□□□□ 0.61
MCF2L-217ENST00000441756 DDX60LQ5H9U9 1706 aaKnown RBP18.84■□□□□ 0.61
MCF2L-217ENST00000441756 SPDYE2BA6NHP3 402 aa18.84■□□□□ 0.61
MCF2L-217ENST00000441756 USP17L12C9JPN9 530 aa18.84■□□□□ 0.61
MCF2L-217ENST00000441756 USP17L21D6R901 530 aa18.84■□□□□ 0.61
MCF2L-217ENST00000441756 NPM3O75607 178 aaKnown RBP18.84■□□□□ 0.61
MCF2L-217ENST00000441756 SPDYE6P0CI01 402 aa18.84■□□□□ 0.61
MCF2L-217ENST00000441756 GMPSP49915 693 aaPredicted RBP18.84■□□□□ 0.61
MCF2L-217ENST00000441756 CDC42EP5Q6NZY7 148 aa18.84■□□□□ 0.61
MCF2L-217ENST00000441756 CTR9Q6PD62 1173 aa18.84■□□□□ 0.61
MCF2L-217ENST00000441756 RUFY3Q7L099 469 aa18.84■□□□□ 0.61
MCF2L-217ENST00000441756 MAPKAPK5Q8IW41 473 aa18.84■□□□□ 0.61
MCF2L-217ENST00000441756 NCOA7Q8NI08 942 aa18.84■□□□□ 0.61
MCF2L-217ENST00000441756 STAG1Q8WVM7 1258 aa18.84■□□□□ 0.61
MCF2L-217ENST00000441756 CDK5RAP2Q96SN8 1893 aa18.84■□□□□ 0.61
MCF2L-217ENST00000441756 MINDY4BA8MYZ0 360 aa18.83■□□□□ 0.6
MCF2L-217ENST00000441756 POLR3DP05423 398 aaPredicted RBP18.83■□□□□ 0.6
MCF2L-217ENST00000441756 ZNF280AP59817 542 aaPredicted RBP18.83■□□□□ 0.6
MCF2L-217ENST00000441756 ANKRD1Q15327 319 aa18.83■□□□□ 0.6
MCF2L-217ENST00000441756 ADCK5Q3MIX3 580 aa18.83■□□□□ 0.6
MCF2L-217ENST00000441756 AKNAD1Q5T1N1 836 aa18.83■□□□□ 0.6
MCF2L-217ENST00000441756 C9orf131Q5VYM1 1079 aa18.83■□□□□ 0.6
MCF2L-217ENST00000441756 MFSD6Q6ZSS7 791 aa18.83■□□□□ 0.6
MCF2L-217ENST00000441756 IDI2Q9BXS1 227 aa18.83■□□□□ 0.6
MCF2L-217ENST00000441756 UPF3BQ9BZI7 483 aaKnown RBP18.83■□□□□ 0.6
MCF2L-217ENST00000441756 KRT23Q9C075 422 aa18.83■□□□□ 0.6
MCF2L-217ENST00000441756 ZNF287Q9HBT7 754 aa18.83■□□□□ 0.6
MCF2L-217ENST00000441756 MKRN1Q9UHC7 482 aaKnown RBP18.83■□□□□ 0.6
MCF2L-217ENST00000441756 ROBO3Q96MS0 1386 aa18.82■□□□□ 0.6
MCF2L-217ENST00000441756 RPS6KB1P23443 525 aa18.82■□□□□ 0.6
MCF2L-217ENST00000441756 TTC6Q86TZ1 520 aa18.82■□□□□ 0.6
MCF2L-217ENST00000441756 IPO9Q96P70 1041 aaKnown RBP18.82■□□□□ 0.6
MCF2L-217ENST00000441756 MYOZ2Q9NPC6 264 aa18.82■□□□□ 0.6
MCF2L-217ENST00000441756 PDRG1Q9NUG6 133 aa18.82■□□□□ 0.6
MCF2L-217ENST00000441756 TAOK2Q9UL54 1235 aa18.82■□□□□ 0.6
MCF2L-217ENST00000441756 COL2A1P02458 1487 aaPredicted RBP18.82■□□□□ 0.6
MCF2L-217ENST00000441756 BAZ2AQ9UIF9 1905 aaKnown RBP18.82■□□□□ 0.6
MCF2L-217ENST00000441756 WDR19Q8NEZ3 1342 aa18.81■□□□□ 0.6
MCF2L-217ENST00000441756 DCAF8L1A6NGE4 600 aa18.81■□□□□ 0.6
MCF2L-217ENST00000441756 H7C1D1 291 aa18.81■□□□□ 0.6
MCF2L-217ENST00000441756 WDHD1O75717 1129 aaPredicted RBP18.81■□□□□ 0.6
MCF2L-217ENST00000441756 PDE4BQ07343 736 aa18.81■□□□□ 0.6
MCF2L-217ENST00000441756 PICALMQ13492 652 aa18.81■□□□□ 0.6
MCF2L-217ENST00000441756 C12orf60Q5U649 245 aa18.81■□□□□ 0.6
MCF2L-217ENST00000441756 STOX1Q6ZVD7 989 aa18.81■□□□□ 0.6
MCF2L-217ENST00000441756 TBC1D10CQ8IV04 446 aa18.81■□□□□ 0.6
MCF2L-217ENST00000441756 MICALL2Q8IY33 904 aa18.81■□□□□ 0.6
MCF2L-217ENST00000441756 TAF6LQ9Y6J9 622 aa18.81■□□□□ 0.6
MCF2L-217ENST00000441756 ENTPD3O75355 529 aa18.8■□□□□ 0.6
MCF2L-217ENST00000441756 HLA-DOAP06340 250 aa18.8■□□□□ 0.6
MCF2L-217ENST00000441756 MCM5P33992 734 aa18.8■□□□□ 0.6
MCF2L-217ENST00000441756 CTDSPL2Q05D32 466 aa18.8■□□□□ 0.6
MCF2L-217ENST00000441756 FKBP1CQ5VVH2 108 aa18.8■□□□□ 0.6
MCF2L-217ENST00000441756 DPY19L2Q6NUT2 758 aa18.8■□□□□ 0.6
MCF2L-217ENST00000441756 DHX32Q7L7V1 743 aaKnown RBP18.8■□□□□ 0.6
MCF2L-217ENST00000441756 NBPF3Q9H094 633 aa18.8■□□□□ 0.6
MCF2L-217ENST00000441756 OSBPL5Q9H0X9 879 aaPredicted RBP18.8■□□□□ 0.6
MCF2L-217ENST00000441756 ALDH8A1Q9H2A2 487 aaPredicted RBP18.8■□□□□ 0.6
MCF2L-217ENST00000441756 DHX36Q9H2U1 1008 aaKnown RBP18.8■□□□□ 0.6
MCF2L-217ENST00000441756 TOMM22Q9NS69 142 aa18.8■□□□□ 0.6
MCF2L-217ENST00000441756 CNOT7Q9UIV1 285 aaKnown RBP18.8■□□□□ 0.6
MCF2L-217ENST00000441756 MYH1P12882 1939 aa18.79■□□□□ 0.6
MCF2L-217ENST00000441756 LMOD1P29536 600 aaPredicted RBP18.79■□□□□ 0.6
MCF2L-217ENST00000441756 FGD1P98174 961 aa18.79■□□□□ 0.6
MCF2L-217ENST00000441756 SPDYE2Q495Y8 402 aa18.79■□□□□ 0.6
MCF2L-217ENST00000441756 ESR2Q92731 530 aa18.79■□□□□ 0.6
MCF2L-217ENST00000441756 PRMT6Q96LA8 375 aaPredicted RBP18.79■□□□□ 0.6
MCF2L-217ENST00000441756 TTC14Q96N46 770 aa18.79■□□□□ 0.6
MCF2L-217ENST00000441756 TDRD3Q9H7E2 651 aaKnown RBP18.79■□□□□ 0.6
MCF2L-217ENST00000441756 SAP30BPQ9UHR5 308 aaKnown RBP18.79■□□□□ 0.6
MCF2L-217ENST00000441756 K7ELQ4 463 aaPredicted RBP18.78■□□□□ 0.6
MCF2L-217ENST00000441756 ORC4O43929 436 aa18.78■□□□□ 0.6
MCF2L-217ENST00000441756 MB21D2Q8IYB1 491 aaPredicted RBP18.78■□□□□ 0.6
MCF2L-217ENST00000441756 ZBED3Q96IU2 234 aaPredicted RBP18.78■□□□□ 0.6
MCF2L-217ENST00000441756 MTA3Q9BTC8 594 aa18.78■□□□□ 0.6
MCF2L-217ENST00000441756 TBC1D2Q9BYX2 928 aa18.78■□□□□ 0.6
MCF2L-217ENST00000441756 GPRC5DQ9NZD1 345 aa18.78■□□□□ 0.6
MCF2L-217ENST00000441756 ZNF70Q9UC06 446 aaPredicted RBP18.78■□□□□ 0.6
MCF2L-217ENST00000441756 NEDD4P46934 1319 aa18.77■□□□□ 0.6
MCF2L-217ENST00000441756 TNNI2P48788 182 aa18.77■□□□□ 0.6
MCF2L-217ENST00000441756 TNFAIP1Q13829 316 aa18.77■□□□□ 0.6
MCF2L-217ENST00000441756 SART3Q15020 963 aaKnown RBP18.77■□□□□ 0.6
MCF2L-217ENST00000441756 KIF4BQ2VIQ3 1234 aa18.77■□□□□ 0.6
MCF2L-217ENST00000441756 DDX4Q9NQI0 724 aaKnown RBP18.77■□□□□ 0.6
MCF2L-217ENST00000441756 PCDHAC2Q9Y5I4 1007 aa18.77■□□□□ 0.6
MCF2L-217ENST00000441756 CYP2D7A0A087X1C5 515 aa18.76■□□□□ 0.59
MCF2L-217ENST00000441756 WNT10BO00744 389 aa18.76■□□□□ 0.59
MCF2L-217ENST00000441756 PRC1O43663 620 aa18.76■□□□□ 0.59
MCF2L-217ENST00000441756 FGRP09769 529 aa18.76■□□□□ 0.59
MCF2L-217ENST00000441756 CYP2D6P10635 497 aa18.76■□□□□ 0.59
MCF2L-217ENST00000441756 AK2P54819 239 aa18.76■□□□□ 0.59
MCF2L-217ENST00000441756 RRP12Q5JTH9 1297 aaKnown RBP18.76■□□□□ 0.59
MCF2L-217ENST00000441756 TMEM87BQ96K49 555 aa18.76■□□□□ 0.59
MCF2L-217ENST00000441756 EHD4Q9H223 541 aa18.76■□□□□ 0.59
MCF2L-217ENST00000441756 SWAP70Q9UH65 585 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms