RNA–Protein interactions for RNA: ENST00000441439.6

LMO3-208, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-208ENST00000441439 DACH1Q9UI36 760 aa8.99□□□□□ -0.97
LMO3-208ENST00000441439 TTF2Q9UNY4 1162 aaKnown RBP8.99□□□□□ -0.97
LMO3-208ENST00000441439 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.99□□□□□ -0.97
LMO3-208ENST00000441439 TNS2Q63HR2 1409 aa8.99□□□□□ -0.97
LMO3-208ENST00000441439 HSP90B1P14625 803 aaKnown RBP8.98□□□□□ -0.97
LMO3-208ENST00000441439 GBP6Q6ZN66 633 aa8.98□□□□□ -0.97
LMO3-208ENST00000441439 SPATS2Q86XZ4 545 aaKnown RBP8.98□□□□□ -0.97
LMO3-208ENST00000441439 POTEDQ86YR6 584 aa8.98□□□□□ -0.97
LMO3-208ENST00000441439 MLKLQ8NB16 471 aa8.98□□□□□ -0.97
LMO3-208ENST00000441439 SYTL4Q96C24 671 aaPredicted RBP8.98□□□□□ -0.97
LMO3-208ENST00000441439 CDHR2Q9BYE9 1310 aa8.98□□□□□ -0.97
LMO3-208ENST00000441439 TMEM232C9JQI7 657 aa8.98□□□□□ -0.97
LMO3-208ENST00000441439 ERCC5P28715 1186 aaPredicted RBP8.98□□□□□ -0.97
LMO3-208ENST00000441439 HOXC9P31274 260 aa8.98□□□□□ -0.97
LMO3-208ENST00000441439 KIF23Q02241 960 aaPredicted RBP8.98□□□□□ -0.97
LMO3-208ENST00000441439 CFAP100Q494V2 611 aa8.98□□□□□ -0.97
LMO3-208ENST00000441439 FOXR1Q6PIV2 292 aa8.98□□□□□ -0.97
LMO3-208ENST00000441439 APTXQ7Z2E3 356 aaKnown RBP8.98□□□□□ -0.97
LMO3-208ENST00000441439 UBE3BQ7Z3V4 1068 aa8.98□□□□□ -0.97
LMO3-208ENST00000441439 JMYQ8N9B5 988 aa8.98□□□□□ -0.97
LMO3-208ENST00000441439 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.98□□□□□ -0.97
LMO3-208ENST00000441439 MAP3K14Q99558 947 aa8.98□□□□□ -0.97
LMO3-208ENST00000441439 MRPL44Q9H9J2 332 aaKnown RBP8.98□□□□□ -0.97
LMO3-208ENST00000441439 GPR108Q9NPR9 543 aa8.98□□□□□ -0.97
LMO3-208ENST00000441439 TLR7Q9NYK1 1049 aaKnown RBP8.98□□□□□ -0.97
LMO3-208ENST00000441439 CEP83Q9Y592 693 aa8.98□□□□□ -0.97
LMO3-208ENST00000441439 TIAM2Q8IVF5 1701 aa8.98□□□□□ -0.97
LMO3-208ENST00000441439 SRRM3A6NNA2 597 aaPredicted RBP8.98□□□□□ -0.97
LMO3-208ENST00000441439 ZEB2O60315 1214 aa8.98□□□□□ -0.97
LMO3-208ENST00000441439 RFX5P48382 616 aaPredicted RBP8.98□□□□□ -0.97
LMO3-208ENST00000441439 KIF4BQ2VIQ3 1234 aa8.98□□□□□ -0.97
LMO3-208ENST00000441439 RABL6Q3YEC7 729 aaPredicted RBP8.98□□□□□ -0.97
LMO3-208ENST00000441439 EMC10Q5UCC4 262 aa8.98□□□□□ -0.97
LMO3-208ENST00000441439 OLFM4Q6UX06 510 aa8.98□□□□□ -0.97
LMO3-208ENST00000441439 KBTBD3Q8NAB2 608 aa8.98□□□□□ -0.97
LMO3-208ENST00000441439 AFAP1L1Q8TED9 768 aa8.98□□□□□ -0.97
LMO3-208ENST00000441439 CCDC12Q8WUD4 166 aaPredicted RBP8.98□□□□□ -0.97
LMO3-208ENST00000441439 SUCLG2Q96I99 432 aa8.98□□□□□ -0.97
LMO3-208ENST00000441439 GGA2Q9UJY4 613 aa8.98□□□□□ -0.97
LMO3-208ENST00000441439 EID1Q9Y6B2 187 aa8.98□□□□□ -0.97
LMO3-208ENST00000441439 HSP90B2PQ58FF3 399 aa8.97□□□□□ -0.97
LMO3-208ENST00000441439 METTL16Q86W50 562 aaKnown RBP8.97□□□□□ -0.97
LMO3-208ENST00000441439 MICALL1Q8N3F8 863 aa8.97□□□□□ -0.97
LMO3-208ENST00000441439 RAI14Q9P0K7 980 aa8.97□□□□□ -0.97
LMO3-208ENST00000441439 LOC102724159A0A0B4J2E5 919 aa8.97□□□□□ -0.97
LMO3-208ENST00000441439 KIF5CO60282 957 aa8.97□□□□□ -0.97
LMO3-208ENST00000441439 WDHD1O75717 1129 aaPredicted RBP8.97□□□□□ -0.97
LMO3-208ENST00000441439 SYKP43405 635 aa8.97□□□□□ -0.97
LMO3-208ENST00000441439 VSNL1P62760 191 aa8.97□□□□□ -0.97
LMO3-208ENST00000441439 CEBPZQ03701 1054 aaKnown RBP8.97□□□□□ -0.97
LMO3-208ENST00000441439 PWP2Q15269 919 aaKnown RBP8.97□□□□□ -0.97
LMO3-208ENST00000441439 MAP9Q49MG5 647 aa8.97□□□□□ -0.97
LMO3-208ENST00000441439 YTHDF3Q7Z739 585 aaKnown RBP8.97□□□□□ -0.97
LMO3-208ENST00000441439 PRPF38AQ8NAV1 312 aaKnown RBP8.97□□□□□ -0.97
LMO3-208ENST00000441439 CXorf56Q9H5V9 222 aa8.97□□□□□ -0.97
LMO3-208ENST00000441439 FANCLQ9NW38 375 aa8.97□□□□□ -0.97
LMO3-208ENST00000441439 PA2G4Q9UQ80 394 aaKnown RBP8.97□□□□□ -0.97
LMO3-208ENST00000441439 AKR1B15C9JRZ8 316 aaPredicted RBP8.97□□□□□ -0.97
LMO3-208ENST00000441439 E7EWF7 191 aa8.97□□□□□ -0.97
LMO3-208ENST00000441439 GNL2Q13823 731 aaKnown RBP8.97□□□□□ -0.97
LMO3-208ENST00000441439 MORC3Q14149 939 aa8.97□□□□□ -0.97
LMO3-208ENST00000441439 ZMYM1Q5SVZ6 1142 aa8.97□□□□□ -0.97
LMO3-208ENST00000441439 SHC4Q6S5L8 630 aa8.97□□□□□ -0.97
LMO3-208ENST00000441439 CERS3Q8IU89 383 aa8.97□□□□□ -0.97
LMO3-208ENST00000441439 NUTM2AQ8IVF1 878 aaPredicted RBP8.97□□□□□ -0.97
LMO3-208ENST00000441439 CEP120Q8N960 986 aa8.97□□□□□ -0.97
LMO3-208ENST00000441439 SECISBP2LQ93073 1101 aaKnown RBP8.97□□□□□ -0.97
LMO3-208ENST00000441439 BOLA2Q9H3K6 86 aa8.97□□□□□ -0.97
LMO3-208ENST00000441439 FAM204AQ9H8W3 233 aa8.97□□□□□ -0.97
LMO3-208ENST00000441439 HPCAL4Q9UM19 191 aa8.97□□□□□ -0.97
LMO3-208ENST00000441439 DOCK2Q92608 1830 aa8.96□□□□□ -0.97
LMO3-208ENST00000441439 CTAGE9A4FU28 777 aa8.96□□□□□ -0.97
LMO3-208ENST00000441439 LRRIQ3A6PVS8 624 aaPredicted RBP8.96□□□□□ -0.97
LMO3-208ENST00000441439 N4BP1O75113 896 aaKnown RBP8.96□□□□□ -0.97
LMO3-208ENST00000441439 EPB41P11171 864 aaKnown RBP8.96□□□□□ -0.97
LMO3-208ENST00000441439 PAXIP1Q6ZW49 1069 aaPredicted RBP8.96□□□□□ -0.97
LMO3-208ENST00000441439 ZNF572Q7Z3I7 529 aaPredicted RBP8.96□□□□□ -0.97
LMO3-208ENST00000441439 BICC1Q9H694 974 aaKnown RBP8.96□□□□□ -0.97
LMO3-208ENST00000441439 MYH13Q9UKX3 1938 aa8.96□□□□□ -0.97
LMO3-208ENST00000441439 ABCC12Q96J65 1359 aa8.96□□□□□ -0.97
LMO3-208ENST00000441439 BMP6P22004 513 aa8.96□□□□□ -0.98
LMO3-208ENST00000441439 TNNI3KQ59H18 835 aa8.96□□□□□ -0.98
LMO3-208ENST00000441439 AMOTL1Q8IY63 956 aa8.96□□□□□ -0.98
LMO3-208ENST00000441439 ZNF579Q8NAF0 562 aaKnown RBP8.96□□□□□ -0.98
LMO3-208ENST00000441439 C9orf78Q9NZ63 289 aaPredicted RBP8.96□□□□□ -0.98
LMO3-208ENST00000441439 HOOK1Q9UJC3 728 aaKnown RBP8.96□□□□□ -0.98
LMO3-208ENST00000441439 MAP3K2Q9Y2U5 619 aa8.96□□□□□ -0.98
LMO3-208ENST00000441439 FPGT-TNNI3KV9GXZ4 949 aa8.96□□□□□ -0.98
LMO3-208ENST00000441439 CTAGE15A4D2H0 777 aa8.96□□□□□ -0.98
LMO3-208ENST00000441439 RNF40O75150 1001 aa8.96□□□□□ -0.98
LMO3-208ENST00000441439 FSBPO95073 299 aa8.96□□□□□ -0.98
LMO3-208ENST00000441439 CTAGE8P0CG41 777 aa8.96□□□□□ -0.98
LMO3-208ENST00000441439 USP14P54578 494 aa8.96□□□□□ -0.98
LMO3-208ENST00000441439 SKOR1P84550 965 aa8.96□□□□□ -0.98
LMO3-208ENST00000441439 CTAGE6Q86UF2 777 aa8.96□□□□□ -0.98
LMO3-208ENST00000441439 CTAGE4Q8IX94 777 aa8.96□□□□□ -0.98
LMO3-208ENST00000441439 C8orf76Q96K31 380 aa8.96□□□□□ -0.98
LMO3-208ENST00000441439 NAPGQ99747 312 aaPredicted RBP8.96□□□□□ -0.98
LMO3-208ENST00000441439 SH3GL2Q99962 352 aa8.96□□□□□ -0.98
LMO3-208ENST00000441439 DBNLQ9UJU6 430 aaKnown RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms