RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 KINO60870 393 aaKnown RBP12.19□□□□□ -0.46
SYNE2-206ENST00000441438 KIAA0754O94854 1291 aa12.19□□□□□ -0.46
SYNE2-206ENST00000441438 PKN2Q16513 984 aaKnown RBP12.19□□□□□ -0.46
SYNE2-206ENST00000441438 ANO1Q5XXA6 986 aa12.19□□□□□ -0.46
SYNE2-206ENST00000441438 FIP1L1Q6UN15 594 aaKnown RBP12.19□□□□□ -0.46
SYNE2-206ENST00000441438 RTL10Q7L3V2 364 aa12.19□□□□□ -0.46
SYNE2-206ENST00000441438 NACA2Q9H009 215 aa12.19□□□□□ -0.46
SYNE2-206ENST00000441438 SEL1LQ9UBV2 794 aa12.19□□□□□ -0.46
SYNE2-206ENST00000441438 LINC00854A0A1B0GVQ3 168 aa12.18□□□□□ -0.46
SYNE2-206ENST00000441438 PKN1Q16512 942 aa12.18□□□□□ -0.46
SYNE2-206ENST00000441438 GSDMBQ8TAX9 411 aa12.18□□□□□ -0.46
SYNE2-206ENST00000441438 DHRS1Q96LJ7 313 aa12.18□□□□□ -0.46
SYNE2-206ENST00000441438 YIPF2Q9BWQ6 316 aa12.18□□□□□ -0.46
SYNE2-206ENST00000441438 GTF2A1LQ9UNN4 478 aa12.18□□□□□ -0.46
SYNE2-206ENST00000441438 LRRC7Q96NW7 1537 aa12.17□□□□□ -0.46
SYNE2-206ENST00000441438 STXBP3O00186 592 aa12.17□□□□□ -0.46
SYNE2-206ENST00000441438 BTF3P20290 206 aaKnown RBP12.17□□□□□ -0.46
SYNE2-206ENST00000441438 TRDNQ13061 729 aa12.17□□□□□ -0.46
SYNE2-206ENST00000441438 TTF1Q15361 905 aaPredicted RBP12.17□□□□□ -0.46
SYNE2-206ENST00000441438 PLEKHA5Q9HAU0 1116 aa12.17□□□□□ -0.46
SYNE2-206ENST00000441438 TBC1D7Q9P0N9 293 aa12.17□□□□□ -0.46
SYNE2-206ENST00000441438 CLIP2Q9UDT6 1046 aa12.17□□□□□ -0.46
SYNE2-206ENST00000441438 CEP131Q9UPN4 1083 aa12.17□□□□□ -0.46
SYNE2-206ENST00000441438 F8VZ95 297 aa12.17□□□□□ -0.46
SYNE2-206ENST00000441438 FOXN3O00409 490 aaPredicted RBP12.17□□□□□ -0.46
SYNE2-206ENST00000441438 PRPF38BQ5VTL8 546 aaKnown RBP12.17□□□□□ -0.46
SYNE2-206ENST00000441438 UNC45AQ9H3U1 944 aa12.17□□□□□ -0.46
SYNE2-206ENST00000441438 MYO1BO43795 1136 aa12.17□□□□□ -0.46
SYNE2-206ENST00000441438 ANKRD18AQ8IVF6 992 aa12.17□□□□□ -0.46
SYNE2-206ENST00000441438 THEMISQ8N1K5 641 aaPredicted RBP12.17□□□□□ -0.46
SYNE2-206ENST00000441438 CCDC191Q8NCU4 936 aa12.17□□□□□ -0.46
SYNE2-206ENST00000441438 TRPV5Q9NQA5 729 aa12.17□□□□□ -0.46
SYNE2-206ENST00000441438 MAFBQ9Y5Q3 323 aaPredicted RBP12.17□□□□□ -0.46
SYNE2-206ENST00000441438 SARSP49591 514 aaKnown RBP12.16□□□□□ -0.46
SYNE2-206ENST00000441438 PPM1FP49593 454 aaPredicted RBP12.16□□□□□ -0.46
SYNE2-206ENST00000441438 SHROOM1Q2M3G4 852 aaPredicted RBP12.16□□□□□ -0.46
SYNE2-206ENST00000441438 FILIP1LQ4L180 1135 aa12.16□□□□□ -0.46
SYNE2-206ENST00000441438 FAM117BQ6P1L5 589 aa12.16□□□□□ -0.46
SYNE2-206ENST00000441438 LVRNQ6Q4G3 990 aa12.16□□□□□ -0.46
SYNE2-206ENST00000441438 RMDN2Q96LZ7 410 aa12.16□□□□□ -0.46
SYNE2-206ENST00000441438 KCTD5Q9NXV2 234 aa12.16□□□□□ -0.46
SYNE2-206ENST00000441438 PCSK1NQ9UHG2 260 aa12.16□□□□□ -0.46
SYNE2-206ENST00000441438 TMEM2Q9UHN6 1383 aa12.16□□□□□ -0.46
SYNE2-206ENST00000441438 CDC42BPGQ6DT37 1551 aa12.16□□□□□ -0.46
SYNE2-206ENST00000441438 KIF1AQ12756 1690 aa12.16□□□□□ -0.46
SYNE2-206ENST00000441438 NUP155O75694 1391 aa12.16□□□□□ -0.46
SYNE2-206ENST00000441438 PPP1R3GB7ZBB8 358 aa12.16□□□□□ -0.46
SYNE2-206ENST00000441438 RCAN1P53805 252 aa12.16□□□□□ -0.46
SYNE2-206ENST00000441438 EIF4A2Q14240 407 aaKnown RBP12.16□□□□□ -0.46
SYNE2-206ENST00000441438 ZC3H12BQ5HYM0 836 aaKnown RBP12.16□□□□□ -0.46
SYNE2-206ENST00000441438 PLBD1Q6P4A8 553 aa12.16□□□□□ -0.46
SYNE2-206ENST00000441438 NKAIN3Q8N8D7 197 aa12.16□□□□□ -0.46
SYNE2-206ENST00000441438 TRMT2BQ96GJ1 504 aaKnown RBP12.16□□□□□ -0.46
SYNE2-206ENST00000441438 CPLX1O14810 134 aa12.15□□□□□ -0.46
SYNE2-206ENST00000441438 RAC2P15153 192 aa12.15□□□□□ -0.46
SYNE2-206ENST00000441438 WTAPQ15007 396 aa12.15□□□□□ -0.46
SYNE2-206ENST00000441438 CCDC178Q5BJE1 867 aa12.15□□□□□ -0.46
SYNE2-206ENST00000441438 CFAP58Q5T655 872 aa12.15□□□□□ -0.46
SYNE2-206ENST00000441438 TBC1D22AQ8WUA7 517 aa12.15□□□□□ -0.46
SYNE2-206ENST00000441438 NUDT16Q96DE0 195 aaKnown RBP12.15□□□□□ -0.46
SYNE2-206ENST00000441438 FANCLQ9NW38 375 aa12.15□□□□□ -0.46
SYNE2-206ENST00000441438 IPPQ9Y573 584 aa12.15□□□□□ -0.46
SYNE2-206ENST00000441438 V9GYY5 206 aaPredicted RBP12.15□□□□□ -0.46
SYNE2-206ENST00000441438 FAM221BA6H8Z2 402 aa12.15□□□□□ -0.46
SYNE2-206ENST00000441438 ATF7P17544 494 aaPredicted RBP12.15□□□□□ -0.46
SYNE2-206ENST00000441438 HPDP32754 393 aaPredicted RBP12.15□□□□□ -0.46
SYNE2-206ENST00000441438 STT3AP46977 705 aa12.15□□□□□ -0.46
SYNE2-206ENST00000441438 CCDC129Q6ZRS4 1044 aa12.15□□□□□ -0.46
SYNE2-206ENST00000441438 DCAF11Q8TEB1 546 aa12.15□□□□□ -0.46
SYNE2-206ENST00000441438 RNF19AQ9NV58 838 aa12.15□□□□□ -0.46
SYNE2-206ENST00000441438 STRCP1A6NGW2 1772 aa12.15□□□□□ -0.47
SYNE2-206ENST00000441438 GNL2Q13823 731 aaKnown RBP12.14□□□□□ -0.47
SYNE2-206ENST00000441438 MUM1Q2TAK8 710 aa12.14□□□□□ -0.47
SYNE2-206ENST00000441438 AP1ARQ63HQ0 302 aa12.14□□□□□ -0.47
SYNE2-206ENST00000441438 ZSWIM6Q9HCJ5 1215 aa12.14□□□□□ -0.47
SYNE2-206ENST00000441438 EXOC1Q9NV70 894 aa12.14□□□□□ -0.47
SYNE2-206ENST00000441438 MST1RQ04912 1400 aa12.14□□□□□ -0.47
SYNE2-206ENST00000441438 E2F6O75461 281 aa12.14□□□□□ -0.47
SYNE2-206ENST00000441438 MAATS1Q7Z4T9 603 aa12.14□□□□□ -0.47
SYNE2-206ENST00000441438 ASIC4Q96FT7 647 aa12.14□□□□□ -0.47
SYNE2-206ENST00000441438 GBP4Q96PP9 640 aa12.14□□□□□ -0.47
SYNE2-206ENST00000441438 BAG1Q99933 345 aaPredicted RBP12.14□□□□□ -0.47
SYNE2-206ENST00000441438 VEZTQ9HBM0 779 aa12.14□□□□□ -0.47
SYNE2-206ENST00000441438 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.14□□□□□ -0.47
SYNE2-206ENST00000441438 TRPM1Q7Z4N2 1603 aa12.14□□□□□ -0.47
SYNE2-206ENST00000441438 NR1I2O75469 434 aa12.14□□□□□ -0.47
SYNE2-206ENST00000441438 ARIH2O95376 493 aa12.14□□□□□ -0.47
SYNE2-206ENST00000441438 KCNA6P17658 529 aa12.14□□□□□ -0.47
SYNE2-206ENST00000441438 GUCY2CP25092 1073 aa12.14□□□□□ -0.47
SYNE2-206ENST00000441438 HOXD11P31277 338 aaPredicted RBP12.14□□□□□ -0.47
SYNE2-206ENST00000441438 TTC8Q8TAM2 541 aa12.14□□□□□ -0.47
SYNE2-206ENST00000441438 RNF34Q969K3 372 aa12.14□□□□□ -0.47
SYNE2-206ENST00000441438 SPG7Q9UQ90 795 aa12.14□□□□□ -0.47
SYNE2-206ENST00000441438 IQCA1LA6NCM1 817 aa12.13□□□□□ -0.47
SYNE2-206ENST00000441438 FCHSD2O94868 740 aa12.13□□□□□ -0.47
SYNE2-206ENST00000441438 FOXK1P85037 733 aa12.13□□□□□ -0.47
SYNE2-206ENST00000441438 SERINC3Q13530 473 aa12.13□□□□□ -0.47
SYNE2-206ENST00000441438 SEPT7Q16181 437 aaKnown RBP12.13□□□□□ -0.47
SYNE2-206ENST00000441438 EAPPQ56P03 285 aaPredicted RBP12.13□□□□□ -0.47
SYNE2-206ENST00000441438 ARMC4Q5T2S8 1044 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms