RNA–Protein interactions for RNA: ENST00000441135.1

SMPD4-210, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-210ENST00000441135 GPR75-ASB3A0A0A6YYF3 556 aa22.25■■□□□ 1.15
SMPD4-210ENST00000441135 MAP4K4O95819 1239 aaPredicted RBP22.25■■□□□ 1.15
SMPD4-210ENST00000441135 ZKSCAN4Q969J2 545 aaPredicted RBP22.25■■□□□ 1.15
SMPD4-210ENST00000441135 R3HDMLQ9H3Y0 253 aa22.25■■□□□ 1.15
SMPD4-210ENST00000441135 IL1RAPL2Q9NP60 686 aa22.25■■□□□ 1.15
SMPD4-210ENST00000441135 TLR7Q9NYK1 1049 aaKnown RBP22.25■■□□□ 1.15
SMPD4-210ENST00000441135 MYH2Q9UKX2 1941 aa22.24■■□□□ 1.15
SMPD4-210ENST00000441135 CCL15-CCL14A0A0B4J2E2 113 aa22.24■■□□□ 1.15
SMPD4-210ENST00000441135 CCL15Q16663 113 aa22.24■■□□□ 1.15
SMPD4-210ENST00000441135 TBC1D9Q6ZT07 1266 aa22.24■■□□□ 1.15
SMPD4-210ENST00000441135 BRI3BPQ8WY22 251 aa22.24■■□□□ 1.15
SMPD4-210ENST00000441135 NSUN4Q96CB9 384 aaKnown RBP22.24■■□□□ 1.15
SMPD4-210ENST00000441135 PTPN18Q99952 460 aa22.24■■□□□ 1.15
SMPD4-210ENST00000441135 LRRCC1Q9C099 1032 aa22.24■■□□□ 1.15
SMPD4-210ENST00000441135 RAI14Q9P0K7 980 aa22.24■■□□□ 1.15
SMPD4-210ENST00000441135 ZNF112Q9UJU3 913 aa22.24■■□□□ 1.15
SMPD4-210ENST00000441135 WDHD1O75717 1129 aaPredicted RBP22.23■■□□□ 1.15
SMPD4-210ENST00000441135 CRHR2Q13324 411 aa22.23■■□□□ 1.15
SMPD4-210ENST00000441135 PPIL2Q13356 520 aa22.23■■□□□ 1.15
SMPD4-210ENST00000441135 ZNF384Q8TF68 577 aa22.23■■□□□ 1.15
SMPD4-210ENST00000441135 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.23■■□□□ 1.15
SMPD4-210ENST00000441135 LRP2BPQ9P2M1 347 aa22.23■■□□□ 1.15
SMPD4-210ENST00000441135 SUPT16HQ9Y5B9 1047 aaKnown RBP22.23■■□□□ 1.15
SMPD4-210ENST00000441135 NPM3O75607 178 aaKnown RBP22.22■■□□□ 1.15
SMPD4-210ENST00000441135 IFIT2P09913 472 aaKnown RBP22.22■■□□□ 1.15
SMPD4-210ENST00000441135 CETPP11597 493 aa22.22■■□□□ 1.15
SMPD4-210ENST00000441135 INPP5BP32019 993 aa22.22■■□□□ 1.15
SMPD4-210ENST00000441135 PPATQ06203 517 aa22.22■■□□□ 1.15
SMPD4-210ENST00000441135 SNAPC2Q13487 334 aa22.22■■□□□ 1.15
SMPD4-210ENST00000441135 TMED8Q6PL24 325 aaPredicted RBP22.22■■□□□ 1.15
SMPD4-210ENST00000441135 ZFPM1Q8IX07 1006 aa22.22■■□□□ 1.15
SMPD4-210ENST00000441135 ATRNL1Q5VV63 1379 aa22.22■■□□□ 1.15
SMPD4-210ENST00000441135 MAST2Q6P0Q8 1798 aa22.21■■□□□ 1.15
SMPD4-210ENST00000441135 RHBDL3P58872 404 aa22.21■■□□□ 1.15
SMPD4-210ENST00000441135 HDAC1Q13547 482 aaPredicted RBP22.21■■□□□ 1.15
SMPD4-210ENST00000441135 NOL9Q5SY16 702 aaKnown RBP22.21■■□□□ 1.15
SMPD4-210ENST00000441135 ZSCAN29Q8IWY8 852 aaPredicted RBP22.21■■□□□ 1.15
SMPD4-210ENST00000441135 ZCCHC17Q9NP64 241 aaKnown RBP22.21■■□□□ 1.15
SMPD4-210ENST00000441135 APBB1O00213 710 aa22.2■■□□□ 1.14
SMPD4-210ENST00000441135 IRF6O14896 467 aa22.2■■□□□ 1.14
SMPD4-210ENST00000441135 NOL10Q9BSC4 688 aaKnown RBP22.2■■□□□ 1.14
SMPD4-210ENST00000441135 SNRKQ9NRH2 765 aa22.2■■□□□ 1.14
SMPD4-210ENST00000441135 PICALMQ13492 652 aa22.19■■□□□ 1.14
SMPD4-210ENST00000441135 ERO1AQ96HE7 468 aa22.19■■□□□ 1.14
SMPD4-210ENST00000441135 DDX4Q9NQI0 724 aaKnown RBP22.19■■□□□ 1.14
SMPD4-210ENST00000441135 DOCK2Q92608 1830 aa22.18■■□□□ 1.14
SMPD4-210ENST00000441135 COL2A1P02458 1487 aaPredicted RBP22.18■■□□□ 1.14
SMPD4-210ENST00000441135 CYP2E1P05181 493 aaPredicted RBP22.18■■□□□ 1.14
SMPD4-210ENST00000441135 ZAP70P43403 619 aa22.18■■□□□ 1.14
SMPD4-210ENST00000441135 TAF1CQ15572 869 aaPredicted RBP22.18■■□□□ 1.14
SMPD4-210ENST00000441135 NAA16Q6N069 864 aaPredicted RBP22.18■■□□□ 1.14
SMPD4-210ENST00000441135 FBXO46Q6PJ61 603 aaPredicted RBP22.18■■□□□ 1.14
SMPD4-210ENST00000441135 SH3BP5LQ7L8J4 393 aa22.18■■□□□ 1.14
SMPD4-210ENST00000441135 ZFYVE28Q9HCC9 887 aa22.18■■□□□ 1.14
SMPD4-210ENST00000441135 HPS5Q9UPZ3 1129 aa22.18■■□□□ 1.14
SMPD4-210ENST00000441135 PLCG2P16885 1265 aa22.17■■□□□ 1.14
SMPD4-210ENST00000441135 RGS19P49795 217 aa22.17■■□□□ 1.14
SMPD4-210ENST00000441135 MAP3K10Q02779 954 aa22.17■■□□□ 1.14
SMPD4-210ENST00000441135 FAM43AQ8N2R8 423 aa22.17■■□□□ 1.14
SMPD4-210ENST00000441135 KCNH4Q9UQ05 1017 aa22.17■■□□□ 1.14
SMPD4-210ENST00000441135 DDTLA6NHG4 134 aaPredicted RBP22.16■■□□□ 1.14
SMPD4-210ENST00000441135 PHF20L1A8MW92 1017 aa22.16■■□□□ 1.14
SMPD4-210ENST00000441135 BAG3O95817 575 aa22.16■■□□□ 1.14
SMPD4-210ENST00000441135 SCYL3Q8IZE3 742 aa22.16■■□□□ 1.14
SMPD4-210ENST00000441135 GCC1Q96CN9 775 aa22.16■■□□□ 1.14
SMPD4-210ENST00000441135 BTBD19C9JJ37 291 aa22.15■■□□□ 1.14
SMPD4-210ENST00000441135 ATP5JP18859 108 aa22.15■■□□□ 1.14
SMPD4-210ENST00000441135 SP3Q02447 781 aa22.15■■□□□ 1.14
SMPD4-210ENST00000441135 TTF1Q15361 905 aaPredicted RBP22.15■■□□□ 1.14
SMPD4-210ENST00000441135 TEX11Q8IYF3 940 aa22.15■■□□□ 1.14
SMPD4-210ENST00000441135 PICK1Q9NRD5 415 aa22.15■■□□□ 1.14
SMPD4-210ENST00000441135 AK9Q5TCS8 1911 aa22.15■■□□□ 1.14
SMPD4-210ENST00000441135 TBC1D12O60347 775 aa22.14■■□□□ 1.13
SMPD4-210ENST00000441135 EXOC6Q8TAG9 804 aa22.14■■□□□ 1.13
SMPD4-210ENST00000441135 OSBPL5Q9H0X9 879 aaPredicted RBP22.14■■□□□ 1.13
SMPD4-210ENST00000441135 TRIM17Q9Y577 477 aa22.14■■□□□ 1.13
SMPD4-210ENST00000441135 CTNND1O60716 968 aaKnown RBP22.13■■□□□ 1.13
SMPD4-210ENST00000441135 PPP4CP60510 307 aa22.13■■□□□ 1.13
SMPD4-210ENST00000441135 OTOP1Q7RTM1 612 aa22.13■■□□□ 1.13
SMPD4-210ENST00000441135 ANKRD23Q86SG2 305 aa22.13■■□□□ 1.13
SMPD4-210ENST00000441135 PIH1D3Q9NQM4 214 aaKnown RBP22.13■■□□□ 1.13
SMPD4-210ENST00000441135 AATFQ9NY61 560 aaKnown RBP eCLIP22.13■■□□□ 1.13
SMPD4-210ENST00000441135 CXCL11O14625 94 aa22.12■■□□□ 1.13
SMPD4-210ENST00000441135 SMARCA5O60264 1052 aaPredicted RBP22.12■■□□□ 1.13
SMPD4-210ENST00000441135 MLLT1Q03111 559 aaPredicted RBP22.12■■□□□ 1.13
SMPD4-210ENST00000441135 ARHGEF6Q15052 776 aa22.12■■□□□ 1.13
SMPD4-210ENST00000441135 CERS3Q8IU89 383 aa22.12■■□□□ 1.13
SMPD4-210ENST00000441135 CD99L2Q8TCZ2 262 aa22.12■■□□□ 1.13
SMPD4-210ENST00000441135 SH3RF3Q8TEJ3 882 aaPredicted RBP22.12■■□□□ 1.13
SMPD4-210ENST00000441135 GPATCH3Q96I76 525 aa22.12■■□□□ 1.13
SMPD4-210ENST00000441135 TLR2O60603 784 aa22.11■■□□□ 1.13
SMPD4-210ENST00000441135 PTPRAP18433 802 aa22.11■■□□□ 1.13
SMPD4-210ENST00000441135 MAP3K12Q12852 859 aa22.11■■□□□ 1.13
SMPD4-210ENST00000441135 HAUS7Q99871 368 aa22.11■■□□□ 1.13
SMPD4-210ENST00000441135 RWDD1Q9H446 243 aaPredicted RBP22.11■■□□□ 1.13
SMPD4-210ENST00000441135 EFCC1Q9HA90 598 aa22.11■■□□□ 1.13
SMPD4-210ENST00000441135 ECHDC1Q9NTX5 307 aa22.11■■□□□ 1.13
SMPD4-210ENST00000441135 MYO5AQ9Y4I1 1855 aaKnown RBP22.11■■□□□ 1.13
SMPD4-210ENST00000441135 IDH1O75874 414 aaKnown RBP22.1■■□□□ 1.13
SMPD4-210ENST00000441135 ADGRA1Q86SQ6 560 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms