RNA–Protein interactions for RNA: ENST00000440088.5

APTR-204, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best) BASIC

Gene APTR, Length 2,029 nt, Biotype lincRNA, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-204ENST00000440088 F8W031 263 aaPredicted RBP23.16■■□□□ 1.3
APTR-204ENST00000440088 GJB2P29033 226 aa23.16■■□□□ 1.3
APTR-204ENST00000440088 RRP12Q5JTH9 1297 aaKnown RBP23.16■■□□□ 1.3
APTR-204ENST00000440088 GPHNQ9NQX3 736 aaPredicted RBP23.16■■□□□ 1.3
APTR-204ENST00000440088 KCNQ5Q9NR82 932 aa23.16■■□□□ 1.3
APTR-204ENST00000440088 MCM9Q9NXL9 1143 aa23.16■■□□□ 1.3
APTR-204ENST00000440088 PPP1R1BQ9UD71 204 aaPredicted RBP23.16■■□□□ 1.3
APTR-204ENST00000440088 SCN9AQ15858 1988 aa23.15■■□□□ 1.3
APTR-204ENST00000440088 LAMB1P07942 1786 aa23.15■■□□□ 1.3
APTR-204ENST00000440088 CYP2D7A0A087X1C5 515 aa23.15■■□□□ 1.3
APTR-204ENST00000440088 USP17L3A6NCW0 530 aa23.15■■□□□ 1.3
APTR-204ENST00000440088 USP17L4A6NCW7 530 aa23.15■■□□□ 1.3
APTR-204ENST00000440088 USP17L1Q7RTZ2 530 aa23.15■■□□□ 1.3
APTR-204ENST00000440088 STK11IPQ8N1F8 1099 aa23.15■■□□□ 1.3
APTR-204ENST00000440088 NKX2-3Q8TAU0 364 aa23.15■■□□□ 1.3
APTR-204ENST00000440088 CHMP4CQ96CF2 233 aa23.15■■□□□ 1.3
APTR-204ENST00000440088 MXD3Q9BW11 206 aa23.15■■□□□ 1.3
APTR-204ENST00000440088 NAP1L2Q9ULW6 460 aaPredicted RBP23.15■■□□□ 1.3
APTR-204ENST00000440088 DAGLAQ9Y4D2 1042 aa23.15■■□□□ 1.3
APTR-204ENST00000440088 PDIA3P30101 505 aaKnown RBP23.15■■□□□ 1.3
APTR-204ENST00000440088 SCRN1Q12765 414 aa23.15■■□□□ 1.3
APTR-204ENST00000440088 TGFBRAP1Q8WUH2 860 aa23.15■■□□□ 1.3
APTR-204ENST00000440088 GBP4Q96PP9 640 aa23.15■■□□□ 1.3
APTR-204ENST00000440088 CD2APQ9Y5K6 639 aa23.15■■□□□ 1.3
APTR-204ENST00000440088 SH2B2O14492 632 aaPredicted RBP23.14■■□□□ 1.29
APTR-204ENST00000440088 SLC3A2P08195 630 aaKnown RBP23.14■■□□□ 1.29
APTR-204ENST00000440088 DALRD3Q5D0E6 543 aaKnown RBP23.14■■□□□ 1.29
APTR-204ENST00000440088 DACT2Q5SW24 774 aa23.14■■□□□ 1.29
APTR-204ENST00000440088 ESR2Q92731 530 aa23.14■■□□□ 1.29
APTR-204ENST00000440088 ZDHHC9Q9Y397 364 aa23.14■■□□□ 1.29
APTR-204ENST00000440088 FGRP09769 529 aa23.13■■□□□ 1.29
APTR-204ENST00000440088 SART3Q15020 963 aaKnown RBP23.13■■□□□ 1.29
APTR-204ENST00000440088 AMOTL1Q8IY63 956 aa23.13■■□□□ 1.29
APTR-204ENST00000440088 TEX11Q8IYF3 940 aa23.13■■□□□ 1.29
APTR-204ENST00000440088 IGDCC4Q8TDY8 1250 aa23.13■■□□□ 1.29
APTR-204ENST00000440088 MTA3Q9BTC8 594 aa23.13■■□□□ 1.29
APTR-204ENST00000440088 KLF18A0A0U1RQI7 1052 aa23.13■■□□□ 1.29
APTR-204ENST00000440088 BRD1O95696 1058 aa23.13■■□□□ 1.29
APTR-204ENST00000440088 RHBDL3P58872 404 aa23.13■■□□□ 1.29
APTR-204ENST00000440088 HHIPL2Q6UWX4 724 aa23.13■■□□□ 1.29
APTR-204ENST00000440088 VPS33BQ9H267 617 aa23.13■■□□□ 1.29
APTR-204ENST00000440088 SMIM22K7EJ46 135 aa23.12■■□□□ 1.29
APTR-204ENST00000440088 TMEM67Q5HYA8 995 aa23.12■■□□□ 1.29
APTR-204ENST00000440088 TEKT1Q969V4 418 aa23.12■■□□□ 1.29
APTR-204ENST00000440088 CDK5RAP2Q96SN8 1893 aa23.12■■□□□ 1.29
APTR-204ENST00000440088 LLPHQ9BRT6 129 aaKnown RBP23.12■■□□□ 1.29
APTR-204ENST00000440088 BRPF3Q9ULD4 1205 aa23.12■■□□□ 1.29
APTR-204ENST00000440088 BRCA1P38398 1863 aaKnown RBP23.12■■□□□ 1.29
APTR-204ENST00000440088 NAV1Q8NEY1 1877 aa23.12■■□□□ 1.29
APTR-204ENST00000440088 WDR33Q9C0J8 1336 aaKnown RBP23.11■■□□□ 1.29
APTR-204ENST00000440088 IFIT3O14879 490 aaKnown RBP23.11■■□□□ 1.29
APTR-204ENST00000440088 USP17L8P0C7I0 530 aa23.11■■□□□ 1.29
APTR-204ENST00000440088 LIFRP42702 1097 aa23.11■■□□□ 1.29
APTR-204ENST00000440088 PTGER2P43116 358 aa23.11■■□□□ 1.29
APTR-204ENST00000440088 CLEC17AQ6ZS10 378 aa23.11■■□□□ 1.29
APTR-204ENST00000440088 SYT1P21579 422 aa23.11■■□□□ 1.29
APTR-204ENST00000440088 MCM4P33991 863 aa23.11■■□□□ 1.29
APTR-204ENST00000440088 SCNN1DP51172 638 aa23.11■■□□□ 1.29
APTR-204ENST00000440088 CCT2P78371 535 aaKnown RBP23.11■■□□□ 1.29
APTR-204ENST00000440088 C12orf60Q5U649 245 aa23.11■■□□□ 1.29
APTR-204ENST00000440088 KLHL34Q8N239 644 aa23.11■■□□□ 1.29
APTR-204ENST00000440088 ZNF646O15015 1829 aaPredicted RBP23.1■■□□□ 1.29
APTR-204ENST00000440088 ERICH2A1L162 156 aa23.1■■□□□ 1.29
APTR-204ENST00000440088 GOLGA8BA8MQT2 603 aa23.1■■□□□ 1.29
APTR-204ENST00000440088 PDIA4P13667 645 aaKnown RBP23.1■■□□□ 1.29
APTR-204ENST00000440088 PDE4BQ07343 736 aa23.1■■□□□ 1.29
APTR-204ENST00000440088 SGMS1Q86VZ5 419 aa23.1■■□□□ 1.29
APTR-204ENST00000440088 MAPKAPK5Q8IW41 473 aa23.1■■□□□ 1.29
APTR-204ENST00000440088 LARGE2Q8N3Y3 721 aa23.1■■□□□ 1.29
APTR-204ENST00000440088 MRIQ9BWK5 157 aa23.1■■□□□ 1.29
APTR-204ENST00000440088 LY9Q9HBG7 655 aa23.1■■□□□ 1.29
APTR-204ENST00000440088 ZNF277Q9NRM2 450 aaPredicted RBP23.1■■□□□ 1.29
APTR-204ENST00000440088 STX6O43752 255 aa23.09■■□□□ 1.29
APTR-204ENST00000440088 ORC4O43929 436 aa23.09■■□□□ 1.29
APTR-204ENST00000440088 CYP2D6P10635 497 aa23.09■■□□□ 1.29
APTR-204ENST00000440088 PDCP20941 246 aa23.09■■□□□ 1.29
APTR-204ENST00000440088 KIAA0825Q8IV33 1275 aa23.09■■□□□ 1.29
APTR-204ENST00000440088 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.09■■□□□ 1.29
APTR-204ENST00000440088 FLT1P17948 1338 aa23.09■■□□□ 1.29
APTR-204ENST00000440088 YDJCA8MPS7 323 aa23.09■■□□□ 1.29
APTR-204ENST00000440088 HDLBPQ00341 1268 aaKnown RBP23.09■■□□□ 1.29
APTR-204ENST00000440088 UBAC1Q9BSL1 405 aa23.09■■□□□ 1.29
APTR-204ENST00000440088 DHX16O60231 1041 aaKnown RBP23.08■■□□□ 1.29
APTR-204ENST00000440088 RANBP6O60518 1105 aaKnown RBP23.08■■□□□ 1.29
APTR-204ENST00000440088 PRDM1O75626 825 aa23.08■■□□□ 1.29
APTR-204ENST00000440088 EVX2Q03828 476 aa23.08■■□□□ 1.29
APTR-204ENST00000440088 NFXL1Q6ZNB6 911 aa23.08■■□□□ 1.29
APTR-204ENST00000440088 NCOA5Q9HCD5 579 aaKnown RBP23.08■■□□□ 1.29
APTR-204ENST00000440088 ROBO3Q96MS0 1386 aa23.08■■□□□ 1.29
APTR-204ENST00000440088 DTNBO60941 627 aa23.08■■□□□ 1.28
APTR-204ENST00000440088 POLR3DP05423 398 aaPredicted RBP23.08■■□□□ 1.28
APTR-204ENST00000440088 CRKP46108 304 aa23.08■■□□□ 1.28
APTR-204ENST00000440088 APOA5Q6Q788 366 aa23.08■■□□□ 1.28
APTR-204ENST00000440088 TMTC2Q8N394 836 aa23.08■■□□□ 1.28
APTR-204ENST00000440088 SMARCC2Q8TAQ2 1214 aa23.08■■□□□ 1.28
APTR-204ENST00000440088 HPS5Q9UPZ3 1129 aa23.08■■□□□ 1.28
APTR-204ENST00000440088 FOCADQ5VW36 1801 aa23.07■■□□□ 1.28
APTR-204ENST00000440088 JAK2O60674 1132 aa23.07■■□□□ 1.28
APTR-204ENST00000440088 NT5C2P49902 561 aa23.07■■□□□ 1.28
APTR-204ENST00000440088 HMGN5P82970 282 aaKnown RBP23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms