RNA–Protein interactions for RNA: ENST00000439106.5

PRAME-209, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 891 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-209ENST00000439106 GPR75-ASB3A0A0A6YYF3 556 aa16.98■□□□□ 0.31
PRAME-209ENST00000439106 DDTLA6NHG4 134 aaPredicted RBP16.98■□□□□ 0.31
PRAME-209ENST00000439106 SPDYE5A6NIY4 337 aa16.98■□□□□ 0.31
PRAME-209ENST00000439106 CYP2E1P05181 493 aaPredicted RBP16.98■□□□□ 0.31
PRAME-209ENST00000439106 ZAP70P43403 619 aa16.98■□□□□ 0.31
PRAME-209ENST00000439106 CTU1Q7Z7A3 348 aaKnown RBP16.98■□□□□ 0.31
PRAME-209ENST00000439106 SLF2Q8IX21 1173 aa16.98■□□□□ 0.31
PRAME-209ENST00000439106 BRI3BPQ8WY22 251 aa16.98■□□□□ 0.31
PRAME-209ENST00000439106 HOOK2Q96ED9 719 aa16.98■□□□□ 0.31
PRAME-209ENST00000439106 FAM163AQ96GL9 167 aaPredicted RBP16.98■□□□□ 0.31
PRAME-209ENST00000439106 CCL15-CCL14A0A0B4J2E2 113 aa16.97■□□□□ 0.31
PRAME-209ENST00000439106 IRF6O14896 467 aa16.97■□□□□ 0.31
PRAME-209ENST00000439106 INHBEP58166 350 aa16.97■□□□□ 0.31
PRAME-209ENST00000439106 CRHR2Q13324 411 aa16.97■□□□□ 0.31
PRAME-209ENST00000439106 CCL15Q16663 113 aa16.97■□□□□ 0.31
PRAME-209ENST00000439106 ADGRA1Q86SQ6 560 aa16.97■□□□□ 0.31
PRAME-209ENST00000439106 AACSQ86V21 672 aa16.97■□□□□ 0.31
PRAME-209ENST00000439106 ZSCAN29Q8IWY8 852 aaPredicted RBP16.97■□□□□ 0.31
PRAME-209ENST00000439106 PIH1D3Q9NQM4 214 aaKnown RBP16.97■□□□□ 0.31
PRAME-209ENST00000439106 TESPA1A2RU30 521 aaPredicted RBP16.96■□□□□ 0.31
PRAME-209ENST00000439106 ENTPD3O75355 529 aa16.96■□□□□ 0.31
PRAME-209ENST00000439106 ALDH1A1P00352 501 aa16.96■□□□□ 0.31
PRAME-209ENST00000439106 ERO1BQ86YB8 467 aa16.96■□□□□ 0.31
PRAME-209ENST00000439106 FAM43AQ8N2R8 423 aa16.96■□□□□ 0.31
PRAME-209ENST00000439106 RHPN1Q8TCX5 695 aa16.96■□□□□ 0.31
PRAME-209ENST00000439106 CFHR5Q9BXR6 569 aa16.96■□□□□ 0.31
PRAME-209ENST00000439106 NAV1Q8NEY1 1877 aa16.96■□□□□ 0.31
PRAME-209ENST00000439106 FAM196BA6NMK8 535 aa16.95■□□□□ 0.3
PRAME-209ENST00000439106 FKTNO75072 461 aa16.95■□□□□ 0.3
PRAME-209ENST00000439106 GTF2A2P52657 109 aa16.95■□□□□ 0.3
PRAME-209ENST00000439106 GSTO1P78417 241 aa16.95■□□□□ 0.3
PRAME-209ENST00000439106 ERC1Q8IUD2 1116 aa16.95■□□□□ 0.3
PRAME-209ENST00000439106 SH3RF3Q8TEJ3 882 aaPredicted RBP16.95■□□□□ 0.3
PRAME-209ENST00000439106 YTHDC1Q96MU7 727 aaKnown RBP16.95■□□□□ 0.3
PRAME-209ENST00000439106 AATFQ9NY61 560 aaKnown RBP eCLIP16.95■□□□□ 0.3
PRAME-209ENST00000439106 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.95■□□□□ 0.3
PRAME-209ENST00000439106 ZNF112Q9UJU3 913 aa16.95■□□□□ 0.3
PRAME-209ENST00000439106 LDHCP07864 332 aa16.94■□□□□ 0.3
PRAME-209ENST00000439106 NAA16Q6N069 864 aaPredicted RBP16.94■□□□□ 0.3
PRAME-209ENST00000439106 RPAP2Q8IXW5 612 aaPredicted RBP16.94■□□□□ 0.3
PRAME-209ENST00000439106 ZNF512BQ96KM6 892 aaPredicted RBP16.94■□□□□ 0.3
PRAME-209ENST00000439106 ANTXR1Q9H6X2 564 aa16.94■□□□□ 0.3
PRAME-209ENST00000439106 MGAMO43451 1857 aa16.94■□□□□ 0.3
PRAME-209ENST00000439106 CAP1Q01518 475 aa16.93■□□□□ 0.3
PRAME-209ENST00000439106 PPIL2Q13356 520 aa16.93■□□□□ 0.3
PRAME-209ENST00000439106 TAF1CQ15572 869 aaPredicted RBP16.93■□□□□ 0.3
PRAME-209ENST00000439106 OTUD7BQ6GQQ9 843 aa16.93■□□□□ 0.3
PRAME-209ENST00000439106 TEX11Q8IYF3 940 aa16.93■□□□□ 0.3
PRAME-209ENST00000439106 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.93■□□□□ 0.3
PRAME-209ENST00000439106 MYH8P13535 1937 aa16.92■□□□□ 0.3
PRAME-209ENST00000439106 PHF20L1A8MW92 1017 aa16.92■□□□□ 0.3
PRAME-209ENST00000439106 HMMRO75330 724 aa16.92■□□□□ 0.3
PRAME-209ENST00000439106 IDH1O75874 414 aaKnown RBP16.92■□□□□ 0.3
PRAME-209ENST00000439106 DYNLL1P63167 89 aaKnown RBP16.92■□□□□ 0.3
PRAME-209ENST00000439106 PDE3AQ14432 1141 aa16.92■□□□□ 0.3
PRAME-209ENST00000439106 HSP90AB4PQ58FF6 505 aa16.92■□□□□ 0.3
PRAME-209ENST00000439106 NOM1Q5C9Z4 860 aaKnown RBP16.92■□□□□ 0.3
PRAME-209ENST00000439106 NOL9Q5SY16 702 aaKnown RBP16.92■□□□□ 0.3
PRAME-209ENST00000439106 CCDC84Q86UT8 332 aaPredicted RBP16.92■□□□□ 0.3
PRAME-209ENST00000439106 OSBPL5Q9H0X9 879 aaPredicted RBP16.92■□□□□ 0.3
PRAME-209ENST00000439106 DDX60LQ5H9U9 1706 aaKnown RBP16.92■□□□□ 0.3
PRAME-209ENST00000439106 BAZ2AQ9UIF9 1905 aaKnown RBP16.92■□□□□ 0.3
PRAME-209ENST00000439106 BTBD19C9JJ37 291 aa16.91■□□□□ 0.3
PRAME-209ENST00000439106 PPATQ06203 517 aa16.91■□□□□ 0.3
PRAME-209ENST00000439106 SNAPC2Q13487 334 aa16.91■□□□□ 0.3
PRAME-209ENST00000439106 MAPKAPK5Q8IW41 473 aa16.91■□□□□ 0.3
PRAME-209ENST00000439106 CD99L2Q8TCZ2 262 aa16.91■□□□□ 0.3
PRAME-209ENST00000439106 NOL10Q9BSC4 688 aaKnown RBP16.91■□□□□ 0.3
PRAME-209ENST00000439106 HTTP42858 3142 aa16.91■□□□□ 0.3
PRAME-209ENST00000439106 LOC285556D6RIA3 1793 aa16.9■□□□□ 0.3
PRAME-209ENST00000439106 CETPP11597 493 aa16.9■□□□□ 0.3
PRAME-209ENST00000439106 CYP7A1P22680 504 aa16.9■□□□□ 0.3
PRAME-209ENST00000439106 SLC4A8Q2Y0W8 1093 aa16.9■□□□□ 0.3
PRAME-209ENST00000439106 SCYL3Q8IZE3 742 aa16.9■□□□□ 0.3
PRAME-209ENST00000439106 MIGA1Q8NAN2 632 aa16.9■□□□□ 0.3
PRAME-209ENST00000439106 TGFBRAP1Q8WUH2 860 aa16.9■□□□□ 0.3
PRAME-209ENST00000439106 KIF1BPQ96EK5 621 aa16.9■□□□□ 0.3
PRAME-209ENST00000439106 HPS5Q9UPZ3 1129 aa16.9■□□□□ 0.3
PRAME-209ENST00000439106 TRIM17Q9Y577 477 aa16.9■□□□□ 0.3
PRAME-209ENST00000439106 COL2A1P02458 1487 aaPredicted RBP16.9■□□□□ 0.3
PRAME-209ENST00000439106 SMARCA5O60264 1052 aaPredicted RBP16.89■□□□□ 0.29
PRAME-209ENST00000439106 ECM2O94769 699 aaPredicted RBP16.89■□□□□ 0.29
PRAME-209ENST00000439106 SOX10P56693 466 aa16.89■□□□□ 0.29
PRAME-209ENST00000439106 CLASRPQ8N2M8 674 aaKnown RBP16.89■□□□□ 0.29
PRAME-209ENST00000439106 MAGEB6Q8N7X4 407 aa16.89■□□□□ 0.29
PRAME-209ENST00000439106 KCNH4Q9UQ05 1017 aa16.89■□□□□ 0.29
PRAME-209ENST00000439106 CENPFP49454 3210 aa16.89■□□□□ 0.29
PRAME-209ENST00000439106 KIAA0100Q14667 2235 aaKnown RBP16.88■□□□□ 0.29
PRAME-209ENST00000439106 DOCK3Q8IZD9 2030 aa16.88■□□□□ 0.29
PRAME-209ENST00000439106 BAG3O95817 575 aa16.88■□□□□ 0.29
PRAME-209ENST00000439106 IFIT2P09913 472 aaKnown RBP16.88■□□□□ 0.29
PRAME-209ENST00000439106 PTPRAP18433 802 aa16.88■□□□□ 0.29
PRAME-209ENST00000439106 MAP3K10Q02779 954 aa16.88■□□□□ 0.29
PRAME-209ENST00000439106 MOGSQ13724 837 aa16.88■□□□□ 0.29
PRAME-209ENST00000439106 RRP1BQ14684 758 aaKnown RBP16.88■□□□□ 0.29
PRAME-209ENST00000439106 OTOP1Q7RTM1 612 aa16.88■□□□□ 0.29
PRAME-209ENST00000439106 EDC3Q96F86 508 aaKnown RBP16.88■□□□□ 0.29
PRAME-209ENST00000439106 DNAJC2Q99543 621 aaKnown RBP16.88■□□□□ 0.29
PRAME-209ENST00000439106 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.88■□□□□ 0.29
PRAME-209ENST00000439106 ZFYVE28Q9HCC9 887 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms